RNA–Protein interactions for RNA: ENST00000437124.6

DDR1-237, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-237ENST00000437124 PHLPP1O60346 1717 aa23.48■■□□□ 1.35
DDR1-237ENST00000437124 SLC52A1Q9NWF4 448 aa23.48■■□□□ 1.35
DDR1-237ENST00000437124 SETD1AO15047 1707 aaKnown RBP23.46■■□□□ 1.35
DDR1-237ENST00000437124 NCOA3Q9Y6Q9 1424 aa23.44■■□□□ 1.34
DDR1-237ENST00000437124 ANKRD30AQ9BXX3 1397 aa23.44■■□□□ 1.34
DDR1-237ENST00000437124 COL16A1Q07092 1604 aaPredicted RBP23.44■■□□□ 1.34
DDR1-237ENST00000437124 ZFYVE9O95405 1425 aa23.42■■□□□ 1.34
DDR1-237ENST00000437124 PLEKHG1Q9ULL1 1385 aa23.42■■□□□ 1.34
DDR1-237ENST00000437124 SPATA31A6Q5VVP1 1343 aa23.42■■□□□ 1.34
DDR1-237ENST00000437124 RPRD2Q5VT52 1461 aaKnown RBP23.41■■□□□ 1.34
DDR1-237ENST00000437124 CHD2O14647 1828 aaKnown RBP23.4■■□□□ 1.34
DDR1-237ENST00000437124 BCANQ96GW7 911 aa23.4■■□□□ 1.34
DDR1-237ENST00000437124 CHIC2Q9UKJ5 165 aa23.4■■□□□ 1.34
DDR1-237ENST00000437124 LRP6O75581 1613 aa23.39■■□□□ 1.33
DDR1-237ENST00000437124 ZNF772Q68DY9 489 aaPredicted RBP23.38■■□□□ 1.33
DDR1-237ENST00000437124 HDGFP51858 240 aaKnown RBP23.37■■□□□ 1.33
DDR1-237ENST00000437124 UPF1Q92900 1129 aaKnown RBP eCLIP23.36■■□□□ 1.33
DDR1-237ENST00000437124 TBX22Q9Y458 520 aa23.36■■□□□ 1.33
DDR1-237ENST00000437124 AHDC1Q5TGY3 1603 aaPredicted RBP23.35■■□□□ 1.33
DDR1-237ENST00000437124 RIMS2Q9UQ26 1411 aa23.34■■□□□ 1.33
DDR1-237ENST00000437124 ADGRL2O95490 1459 aa23.34■■□□□ 1.33
DDR1-237ENST00000437124 SHPRHQ149N8 1683 aa23.32■■□□□ 1.32
DDR1-237ENST00000437124 PPP1R15AO75807 674 aaPredicted RBP23.32■■□□□ 1.32
DDR1-237ENST00000437124 FAM50AQ14320 339 aaKnown RBP23.32■■□□□ 1.32
DDR1-237ENST00000437124 CADPS2Q86UW7 1296 aa23.32■■□□□ 1.32
DDR1-237ENST00000437124 TMEM131LA2VDJ0 1609 aa23.32■■□□□ 1.32
DDR1-237ENST00000437124 MEX3CQ5U5Q3 659 aaKnown RBP23.31■■□□□ 1.32
DDR1-237ENST00000437124 PIK3R4Q99570 1358 aa23.3■■□□□ 1.32
DDR1-237ENST00000437124 C19orf44Q9H6X5 657 aa23.3■■□□□ 1.32
DDR1-237ENST00000437124 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.29■■□□□ 1.32
DDR1-237ENST00000437124 GCC2Q8IWJ2 1684 aa23.28■■□□□ 1.32
DDR1-237ENST00000437124 DIP2AQ14689 1571 aa23.28■■□□□ 1.32
DDR1-237ENST00000437124 ADAMTS13Q76LX8 1427 aa23.28■■□□□ 1.32
DDR1-237ENST00000437124 CDK12Q9NYV4 1490 aaPredicted RBP23.28■■□□□ 1.32
DDR1-237ENST00000437124 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.28■■□□□ 1.32
DDR1-237ENST00000437124 MYO5BQ9ULV0 1848 aa23.27■■□□□ 1.32
DDR1-237ENST00000437124 C14orf37Q86TY3 774 aa23.27■■□□□ 1.32
DDR1-237ENST00000437124 ATF3P18847 181 aa23.26■■□□□ 1.31
DDR1-237ENST00000437124 TRIM52Q96A61 297 aa23.26■■□□□ 1.31
DDR1-237ENST00000437124 ANKRD50Q9ULJ7 1429 aa23.25■■□□□ 1.31
DDR1-237ENST00000437124 RXRBP28702 533 aa23.25■■□□□ 1.31
DDR1-237ENST00000437124 BRINP3Q76B58 766 aa23.21■■□□□ 1.31
DDR1-237ENST00000437124 DCCP43146 1447 aa23.21■■□□□ 1.31
DDR1-237ENST00000437124 TRPM2O94759 1503 aa23.18■■□□□ 1.3
DDR1-237ENST00000437124 SETD5Q9C0A6 1442 aa23.18■■□□□ 1.3
DDR1-237ENST00000437124 UNC13BO14795 1591 aa23.17■■□□□ 1.3
DDR1-237ENST00000437124 AMOTL2Q9Y2J4 779 aa23.16■■□□□ 1.3
DDR1-237ENST00000437124 ASXL1Q8IXJ9 1541 aa23.15■■□□□ 1.3
DDR1-237ENST00000437124 CHGAP10645 457 aaKnown RBP23.15■■□□□ 1.3
DDR1-237ENST00000437124 PTPRUQ92729 1446 aa23.15■■□□□ 1.3
DDR1-237ENST00000437124 AFF2P51816 1311 aa23.14■■□□□ 1.3
DDR1-237ENST00000437124 SRCAPQ6ZRS2 3230 aa23.14■■□□□ 1.29
DDR1-237ENST00000437124 NUTM2BA6NNL0 878 aaPredicted RBP23.13■■□□□ 1.29
DDR1-237ENST00000437124 NUTM2EB1AL46 878 aaPredicted RBP23.13■■□□□ 1.29
DDR1-237ENST00000437124 NUTM2DQ5VT03 806 aaPredicted RBP23.13■■□□□ 1.29
DDR1-237ENST00000437124 NUTM2AQ8IVF1 878 aaPredicted RBP23.13■■□□□ 1.29
DDR1-237ENST00000437124 ROCK1Q13464 1354 aa23.13■■□□□ 1.29
DDR1-237ENST00000437124 E9PCH4 1651 aa23.13■■□□□ 1.29
DDR1-237ENST00000437124 MST1RQ04912 1400 aa23.11■■□□□ 1.29
DDR1-237ENST00000437124 NHSL1Q5SYE7 1610 aa23.11■■□□□ 1.29
DDR1-237ENST00000437124 LRRC59Q96AG4 307 aaKnown RBP23.1■■□□□ 1.29
DDR1-237ENST00000437124 XRN1Q8IZH2 1706 aaKnown RBP23.1■■□□□ 1.29
DDR1-237ENST00000437124 RBM6P78332 1123 aaKnown RBP23.08■■□□□ 1.29
DDR1-237ENST00000437124 PPARGC1BQ86YN6 1023 aaKnown RBP23.08■■□□□ 1.29
DDR1-237ENST00000437124 IQGAP3Q86VI3 1631 aa23.08■■□□□ 1.28
DDR1-237ENST00000437124 RGS12O14924 1447 aa23.08■■□□□ 1.28
DDR1-237ENST00000437124 SETBP1Q9Y6X0 1596 aa23.07■■□□□ 1.28
DDR1-237ENST00000437124 NRXN3Q9Y4C0 1643 aa23.06■■□□□ 1.28
DDR1-237ENST00000437124 QTRT2Q9H974 415 aaKnown RBP23.05■■□□□ 1.28
DDR1-237ENST00000437124 PNPLA6Q8IY17 1366 aa23.04■■□□□ 1.28
DDR1-237ENST00000437124 ITGAEP38570 1179 aa23.03■■□□□ 1.28
DDR1-237ENST00000437124 C8orf37Q96NL8 207 aa23.03■■□□□ 1.28
DDR1-237ENST00000437124 ADGRL3Q9HAR2 1447 aa23.02■■□□□ 1.28
DDR1-237ENST00000437124 NUP155O75694 1391 aa22.99■■□□□ 1.27
DDR1-237ENST00000437124 METP08581 1390 aa22.99■■□□□ 1.27
DDR1-237ENST00000437124 NGLY1Q96IV0 654 aa22.98■■□□□ 1.27
DDR1-237ENST00000437124 ATAD2Q6PL18 1390 aa22.97■■□□□ 1.27
DDR1-237ENST00000437124 LAMC1P11047 1609 aa22.97■■□□□ 1.27
DDR1-237ENST00000437124 DDX17Q92841 729 aaKnown RBP22.96■■□□□ 1.27
DDR1-237ENST00000437124 NALCNQ8IZF0 1738 aa22.94■■□□□ 1.26
DDR1-237ENST00000437124 C1orf167Q5SNV9 1468 aa22.92■■□□□ 1.26
DDR1-237ENST00000437124 SOS2Q07890 1332 aaPredicted RBP22.91■■□□□ 1.26
DDR1-237ENST00000437124 ADAMTS2O95450 1211 aa22.91■■□□□ 1.26
DDR1-237ENST00000437124 RRBP1Q9P2E9 1410 aaKnown RBP22.91■■□□□ 1.26
DDR1-237ENST00000437124 FOXD1Q16676 465 aa22.9■■□□□ 1.26
DDR1-237ENST00000437124 SPHKAPQ2M3C7 1700 aa22.9■■□□□ 1.26
DDR1-237ENST00000437124 PTCH1Q13635 1447 aa22.9■■□□□ 1.26
DDR1-237ENST00000437124 ZNF326Q5BKZ1 582 aaKnown RBP22.89■■□□□ 1.25
DDR1-237ENST00000437124 FNBP4Q8N3X1 1017 aaPredicted RBP22.89■■□□□ 1.25
DDR1-237ENST00000437124 USP21Q9UK80 565 aa22.89■■□□□ 1.25
DDR1-237ENST00000437124 TRPC5Q9UL62 973 aaPredicted RBP22.89■■□□□ 1.25
DDR1-237ENST00000437124 NEXMIFQ5QGS0 1516 aa22.87■■□□□ 1.25
DDR1-237ENST00000437124 EP400Q96L91 3159 aa22.87■■□□□ 1.25
DDR1-237ENST00000437124 PRAG1Q86YV5 1406 aa22.85■■□□□ 1.25
DDR1-237ENST00000437124 ATRNO75882 1429 aa22.84■■□□□ 1.25
DDR1-237ENST00000437124 COL22A1Q8NFW1 1626 aaPredicted RBP22.84■■□□□ 1.25
DDR1-237ENST00000437124 ZRANB1Q9UGI0 708 aa22.84■■□□□ 1.25
DDR1-237ENST00000437124 CCDC125Q86Z20 511 aa22.83■■□□□ 1.25
DDR1-237ENST00000437124 ORAI2Q96SN7 254 aa22.82■■□□□ 1.24
DDR1-237ENST00000437124 NAIPQ13075 1403 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms