RNA–Protein interactions for RNA: ENST00000436439.6

HMGCL-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2 BASIC

Gene HMGCL, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-204ENST00000436439 SLC26A8Q96RN1 970 aa16.53■□□□□ 0.24
HMGCL-204ENST00000436439 PCGF6Q9BYE7 350 aa16.53■□□□□ 0.24
HMGCL-204ENST00000436439 SLC52A1Q9NWF4 448 aa16.53■□□□□ 0.24
HMGCL-204ENST00000436439 NWD1Q149M9 1564 aa16.52■□□□□ 0.24
HMGCL-204ENST00000436439 ZFYVE9O95405 1425 aa16.52■□□□□ 0.23
HMGCL-204ENST00000436439 ROCK1Q13464 1354 aa16.52■□□□□ 0.23
HMGCL-204ENST00000436439 CHD2O14647 1828 aaKnown RBP16.51■□□□□ 0.23
HMGCL-204ENST00000436439 TMEM94Q12767 1356 aa16.49■□□□□ 0.23
HMGCL-204ENST00000436439 KCNA6P17658 529 aa16.49■□□□□ 0.23
HMGCL-204ENST00000436439 RBM33Q96EV2 1170 aaKnown RBP16.49■□□□□ 0.23
HMGCL-204ENST00000436439 RIMS2Q9UQ26 1411 aa16.49■□□□□ 0.23
HMGCL-204ENST00000436439 ITGAEP38570 1179 aa16.48■□□□□ 0.23
HMGCL-204ENST00000436439 ROBO1Q9Y6N7 1651 aa16.47■□□□□ 0.23
HMGCL-204ENST00000436439 NKTRP30414 1462 aaKnown RBP16.46■□□□□ 0.23
HMGCL-204ENST00000436439 PLEKHG1Q9ULL1 1385 aa16.46■□□□□ 0.23
HMGCL-204ENST00000436439 PROSER2Q86WR7 435 aaPredicted RBP16.45■□□□□ 0.22
HMGCL-204ENST00000436439 BCANQ96GW7 911 aa16.44■□□□□ 0.22
HMGCL-204ENST00000436439 SPHKAPQ2M3C7 1700 aa16.44■□□□□ 0.22
HMGCL-204ENST00000436439 NUP155O75694 1391 aa16.43■□□□□ 0.22
HMGCL-204ENST00000436439 CHGAP10645 457 aaKnown RBP16.43■□□□□ 0.22
HMGCL-204ENST00000436439 FAM135BQ49AJ0 1406 aa16.43■□□□□ 0.22
HMGCL-204ENST00000436439 NUTM2DQ5VT03 806 aaPredicted RBP16.42■□□□□ 0.22
HMGCL-204ENST00000436439 PPP1R15AO75807 674 aaPredicted RBP16.41■□□□□ 0.22
HMGCL-204ENST00000436439 ADAMTS13Q76LX8 1427 aa16.41■□□□□ 0.22
HMGCL-204ENST00000436439 PHF23Q9BUL5 403 aaPredicted RBP16.39■□□□□ 0.21
HMGCL-204ENST00000436439 DIP2AQ14689 1571 aa16.39■□□□□ 0.21
HMGCL-204ENST00000436439 HDGFP51858 240 aaKnown RBP16.38■□□□□ 0.21
HMGCL-204ENST00000436439 NRXN3Q9Y4C0 1643 aa16.38■□□□□ 0.21
HMGCL-204ENST00000436439 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.38■□□□□ 0.21
HMGCL-204ENST00000436439 TBX22Q9Y458 520 aa16.38■□□□□ 0.21
HMGCL-204ENST00000436439 MSH6P52701 1360 aa16.37■□□□□ 0.21
HMGCL-204ENST00000436439 PHLPP1O60346 1717 aa16.37■□□□□ 0.21
HMGCL-204ENST00000436439 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.36■□□□□ 0.21
HMGCL-204ENST00000436439 CLTCL1P53675 1640 aa16.35■□□□□ 0.21
HMGCL-204ENST00000436439 RGS17Q9UGC6 210 aaPredicted RBP16.35■□□□□ 0.21
HMGCL-204ENST00000436439 PTPRUQ92729 1446 aa16.34■□□□□ 0.21
HMGCL-204ENST00000436439 TRPM2O94759 1503 aa16.34■□□□□ 0.21
HMGCL-204ENST00000436439 HRCP23327 699 aa16.33■□□□□ 0.2
HMGCL-204ENST00000436439 NAIPQ13075 1403 aa16.33■□□□□ 0.2
HMGCL-204ENST00000436439 SLAIN2Q9P270 581 aa16.32■□□□□ 0.2
HMGCL-204ENST00000436439 SETBP1Q9Y6X0 1596 aa16.32■□□□□ 0.2
HMGCL-204ENST00000436439 KIF1BO60333 1816 aa16.31■□□□□ 0.2
HMGCL-204ENST00000436439 XRN1Q8IZH2 1706 aaKnown RBP16.31■□□□□ 0.2
HMGCL-204ENST00000436439 COL16A1Q07092 1604 aaPredicted RBP16.31■□□□□ 0.2
HMGCL-204ENST00000436439 NCOA3Q9Y6Q9 1424 aa16.31■□□□□ 0.2
HMGCL-204ENST00000436439 PIK3R4Q99570 1358 aa16.31■□□□□ 0.2
HMGCL-204ENST00000436439 NEXMIFQ5QGS0 1516 aa16.3■□□□□ 0.2
HMGCL-204ENST00000436439 AMOTL2Q9Y2J4 779 aa16.28■□□□□ 0.2
HMGCL-204ENST00000436439 ZNF326Q5BKZ1 582 aaKnown RBP16.26■□□□□ 0.19
HMGCL-204ENST00000436439 C14orf37Q86TY3 774 aa16.26■□□□□ 0.19
HMGCL-204ENST00000436439 METP08581 1390 aa16.25■□□□□ 0.19
HMGCL-204ENST00000436439 AHDC1Q5TGY3 1603 aaPredicted RBP16.25■□□□□ 0.19
HMGCL-204ENST00000436439 C19orf44Q9H6X5 657 aa16.25■□□□□ 0.19
HMGCL-204ENST00000436439 HFM1A2PYH4 1435 aa16.24■□□□□ 0.19
HMGCL-204ENST00000436439 SETD1AO15047 1707 aaKnown RBP16.24■□□□□ 0.19
HMGCL-204ENST00000436439 POTEAQ6S8J7 498 aa16.24■□□□□ 0.19
HMGCL-204ENST00000436439 JCADQ9P266 1359 aa16.23■□□□□ 0.19
HMGCL-204ENST00000436439 NALCNQ8IZF0 1738 aa16.23■□□□□ 0.19
HMGCL-204ENST00000436439 CADPS2Q86UW7 1296 aa16.23■□□□□ 0.19
HMGCL-204ENST00000436439 SHPRHQ149N8 1683 aa16.22■□□□□ 0.19
HMGCL-204ENST00000436439 ATF3P18847 181 aa16.22■□□□□ 0.19
HMGCL-204ENST00000436439 SETD5Q9C0A6 1442 aa16.21■□□□□ 0.19
HMGCL-204ENST00000436439 LRP6O75581 1613 aa16.21■□□□□ 0.19
HMGCL-204ENST00000436439 TRIM52Q96A61 297 aa16.21■□□□□ 0.19
HMGCL-204ENST00000436439 PPLO60437 1756 aa16.21■□□□□ 0.18
HMGCL-204ENST00000436439 NHSL1Q5SYE7 1610 aa16.2■□□□□ 0.18
HMGCL-204ENST00000436439 DCCP43146 1447 aa16.2■□□□□ 0.18
HMGCL-204ENST00000436439 BRINP3Q76B58 766 aa16.19■□□□□ 0.18
HMGCL-204ENST00000436439 MST1RQ04912 1400 aa16.19■□□□□ 0.18
HMGCL-204ENST00000436439 ASXL1Q8IXJ9 1541 aa16.18■□□□□ 0.18
HMGCL-204ENST00000436439 SLC4A1APQ9BWU0 796 aaKnown RBP16.16■□□□□ 0.18
HMGCL-204ENST00000436439 RAB3GAP2Q9H2M9 1393 aa16.16■□□□□ 0.18
HMGCL-204ENST00000436439 ADGRL3Q9HAR2 1447 aa16.15■□□□□ 0.18
HMGCL-204ENST00000436439 FOXD1Q16676 465 aa16.14■□□□□ 0.17
HMGCL-204ENST00000436439 SPATA31A6Q5VVP1 1343 aa16.14■□□□□ 0.17
HMGCL-204ENST00000436439 ACIN1Q9UKV3 1341 aaKnown RBP16.13■□□□□ 0.17
HMGCL-204ENST00000436439 IFT172Q9UG01 1749 aa16.13■□□□□ 0.17
HMGCL-204ENST00000436439 VGFO15240 615 aaPredicted RBP16.12■□□□□ 0.17
HMGCL-204ENST00000436439 DDX17Q92841 729 aaKnown RBP16.12■□□□□ 0.17
HMGCL-204ENST00000436439 PTCH1Q13635 1447 aa16.11■□□□□ 0.17
HMGCL-204ENST00000436439 ROBO2Q9HCK4 1378 aa16.1■□□□□ 0.17
HMGCL-204ENST00000436439 RPGRIP1LQ68CZ1 1315 aa16.1■□□□□ 0.17
HMGCL-204ENST00000436439 MEX3CQ5U5Q3 659 aaKnown RBP16.09■□□□□ 0.17
HMGCL-204ENST00000436439 PRAG1Q86YV5 1406 aa16.09■□□□□ 0.17
HMGCL-204ENST00000436439 C1orf167Q5SNV9 1468 aa16.09■□□□□ 0.17
HMGCL-204ENST00000436439 LAMC1P11047 1609 aa16.09■□□□□ 0.17
HMGCL-204ENST00000436439 NUTM2BA6NNL0 878 aaPredicted RBP16.07■□□□□ 0.16
HMGCL-204ENST00000436439 NUTM2EB1AL46 878 aaPredicted RBP16.07■□□□□ 0.16
HMGCL-204ENST00000436439 NUTM2AQ8IVF1 878 aaPredicted RBP16.07■□□□□ 0.16
HMGCL-204ENST00000436439 SPATA31E1Q6ZUB1 1445 aa16.06■□□□□ 0.16
HMGCL-204ENST00000436439 ADGRF5Q8IZF2 1346 aa16.06■□□□□ 0.16
HMGCL-204ENST00000436439 CCDC144AA2RUR9 1427 aa16.05■□□□□ 0.16
HMGCL-204ENST00000436439 ZEB1P37275 1124 aaPredicted RBP16.05■□□□□ 0.16
HMGCL-204ENST00000436439 DHX57Q6P158 1386 aaKnown RBP16.04■□□□□ 0.16
HMGCL-204ENST00000436439 PNPLA6Q8IY17 1366 aa16.04■□□□□ 0.16
HMGCL-204ENST00000436439 MPHOSPH9Q99550 1183 aa16.04■□□□□ 0.16
HMGCL-204ENST00000436439 RGL3Q3MIN7 710 aa16.03■□□□□ 0.16
HMGCL-204ENST00000436439 ZNF772Q68DY9 489 aaPredicted RBP16.03■□□□□ 0.16
HMGCL-204ENST00000436439 LRRC59Q96AG4 307 aaKnown RBP16.03■□□□□ 0.16
HMGCL-204ENST00000436439 ORAI2Q96SN7 254 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 1433.6 ms