RNA–Protein interactions for RNA: ENST00000436412.1

NIF3L1-208, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 3

Gene NIF3L1, Length 479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-208ENST00000436412 NKX1-1Q15270 411 aaPredicted RBP14.01□□□□□ -0.17
NIF3L1-208ENST00000436412 CDK13Q14004 1512 aaKnown RBP14□□□□□ -0.17
NIF3L1-208ENST00000436412 POTEB3A0JP26 581 aa14□□□□□ -0.17
NIF3L1-208ENST00000436412 DOK7Q18PE1 504 aa14□□□□□ -0.17
NIF3L1-208ENST00000436412 POTEBQ6S5H4 581 aa14□□□□□ -0.17
NIF3L1-208ENST00000436412 STRCQ7RTU9 1775 aa13.99□□□□□ -0.17
NIF3L1-208ENST00000436412 ILDR2Q71H61 639 aa13.99□□□□□ -0.17
NIF3L1-208ENST00000436412 PTPRTO14522 1441 aa13.98□□□□□ -0.17
NIF3L1-208ENST00000436412 MYO5CQ9NQX4 1742 aa13.98□□□□□ -0.17
NIF3L1-208ENST00000436412 EMP3P54852 163 aa13.98□□□□□ -0.17
NIF3L1-208ENST00000436412 FMN1Q68DA7 1419 aa13.98□□□□□ -0.17
NIF3L1-208ENST00000436412 HOXB1P14653 301 aaPredicted RBP13.97□□□□□ -0.17
NIF3L1-208ENST00000436412 KDM5CP41229 1560 aa13.96□□□□□ -0.17
NIF3L1-208ENST00000436412 AFAP1Q8N556 730 aa13.96□□□□□ -0.17
NIF3L1-208ENST00000436412 REREQ9P2R6 1566 aa13.96□□□□□ -0.18
NIF3L1-208ENST00000436412 C2orf72A6NCS6 295 aa13.95□□□□□ -0.18
NIF3L1-208ENST00000436412 ESF1Q9H501 851 aaKnown RBP13.95□□□□□ -0.18
NIF3L1-208ENST00000436412 ATP1B4Q9UN42 357 aaPredicted RBP13.95□□□□□ -0.18
NIF3L1-208ENST00000436412 MYT1LQ9UL68 1186 aa13.94□□□□□ -0.18
NIF3L1-208ENST00000436412 IQSEC2Q5JU85 1478 aa13.93□□□□□ -0.18
NIF3L1-208ENST00000436412 TROQ12816 1431 aaPredicted RBP13.93□□□□□ -0.18
NIF3L1-208ENST00000436412 TRAPPC8Q9Y2L5 1435 aa13.93□□□□□ -0.18
NIF3L1-208ENST00000436412 ZNF710Q8N1W2 664 aa13.93□□□□□ -0.18
NIF3L1-208ENST00000436412 ARHGAP5Q13017 1502 aa13.93□□□□□ -0.18
NIF3L1-208ENST00000436412 KIF14Q15058 1648 aa13.93□□□□□ -0.18
NIF3L1-208ENST00000436412 MLH3Q9UHC1 1453 aa13.93□□□□□ -0.18
NIF3L1-208ENST00000436412 CLIP1P30622 1438 aa13.92□□□□□ -0.18
NIF3L1-208ENST00000436412 AGLP35573 1532 aa13.92□□□□□ -0.18
NIF3L1-208ENST00000436412 HS3ST6Q96QI5 342 aa13.92□□□□□ -0.18
NIF3L1-208ENST00000436412 DIP2CQ9Y2E4 1556 aa13.92□□□□□ -0.18
NIF3L1-208ENST00000436412 GPR153Q6NV75 609 aa13.91□□□□□ -0.18
NIF3L1-208ENST00000436412 CNTLNQ9NXG0 1405 aa13.9□□□□□ -0.18
NIF3L1-208ENST00000436412 FAM205CA6NFA0 338 aa13.9□□□□□ -0.18
NIF3L1-208ENST00000436412 ZSWIM6Q9HCJ5 1215 aa13.9□□□□□ -0.18
NIF3L1-208ENST00000436412 SPATA31D1Q6ZQQ2 1576 aa13.9□□□□□ -0.18
NIF3L1-208ENST00000436412 C3P01024 1663 aa13.89□□□□□ -0.19
NIF3L1-208ENST00000436412 UBTFP17480 764 aaKnown RBP13.89□□□□□ -0.19
NIF3L1-208ENST00000436412 LTBP4Q8N2S1 1624 aa13.89□□□□□ -0.19
NIF3L1-208ENST00000436412 NCOA1Q15788 1441 aa13.88□□□□□ -0.19
NIF3L1-208ENST00000436412 RIMBP2O15034 1052 aa13.87□□□□□ -0.19
NIF3L1-208ENST00000436412 ARHGAP35Q9NRY4 1499 aa13.87□□□□□ -0.19
NIF3L1-208ENST00000436412 ABCA6Q8N139 1617 aa13.86□□□□□ -0.19
NIF3L1-208ENST00000436412 NPATQ14207 1427 aa13.86□□□□□ -0.19
NIF3L1-208ENST00000436412 CDC42BPBQ9Y5S2 1711 aa13.84□□□□□ -0.19
NIF3L1-208ENST00000436412 ABCC1P33527 1531 aa13.84□□□□□ -0.19
NIF3L1-208ENST00000436412 ARSIQ5FYB1 569 aa13.82□□□□□ -0.2
NIF3L1-208ENST00000436412 TMC2Q8TDI7 906 aa13.82□□□□□ -0.2
NIF3L1-208ENST00000436412 KRTAP3-3Q9BYR6 98 aa13.82□□□□□ -0.2
NIF3L1-208ENST00000436412 KRTAP3-2Q9BYR7 98 aa13.82□□□□□ -0.2
NIF3L1-208ENST00000436412 PREX2Q70Z35 1606 aa13.82□□□□□ -0.2
NIF3L1-208ENST00000436412 KHSRPQ92945 711 aaKnown RBP eCLIP13.81□□□□□ -0.2
NIF3L1-208ENST00000436412 MROH2AA6NES4 1674 aa13.81□□□□□ -0.2
NIF3L1-208ENST00000436412 KIDINS220Q9ULH0 1771 aa13.81□□□□□ -0.2
NIF3L1-208ENST00000436412 CCDC18Q5T9S5 1454 aa13.8□□□□□ -0.2
NIF3L1-208ENST00000436412 CAMSAP1Q5T5Y3 1602 aa13.8□□□□□ -0.2
NIF3L1-208ENST00000436412 ITSN2Q9NZM3 1697 aa13.8□□□□□ -0.2
NIF3L1-208ENST00000436412 GTPBP6O43824 516 aaPredicted RBP13.8□□□□□ -0.2
NIF3L1-208ENST00000436412 ZMYM3Q14202 1370 aa13.8□□□□□ -0.2
NIF3L1-208ENST00000436412 ERBB3P21860 1342 aa13.79□□□□□ -0.2
NIF3L1-208ENST00000436412 UBAP1LF5GYI3 381 aa13.78□□□□□ -0.2
NIF3L1-208ENST00000436412 CASKIN1Q8WXD9 1431 aa13.78□□□□□ -0.2
NIF3L1-208ENST00000436412 PLA2R1Q13018 1463 aa13.78□□□□□ -0.2
NIF3L1-208ENST00000436412 SPAG9O60271 1321 aaKnown RBP13.77□□□□□ -0.21
NIF3L1-208ENST00000436412 SLC34A2O95436 690 aa13.77□□□□□ -0.21
NIF3L1-208ENST00000436412 LRRIQ1Q96JM4 1722 aa13.77□□□□□ -0.21
NIF3L1-208ENST00000436412 ZNF335Q9H4Z2 1342 aaPredicted RBP13.77□□□□□ -0.21
NIF3L1-208ENST00000436412 SAMD9LQ8IVG5 1584 aa13.76□□□□□ -0.21
NIF3L1-208ENST00000436412 NCKAP5LQ9HCH0 1330 aa13.76□□□□□ -0.21
NIF3L1-208ENST00000436412 GPHNQ9NQX3 736 aaPredicted RBP13.76□□□□□ -0.21
NIF3L1-208ENST00000436412 RYDENQ9NUL5 291 aaKnown RBP13.76□□□□□ -0.21
NIF3L1-208ENST00000436412 VARS2Q5ST30 1063 aaKnown RBP13.75□□□□□ -0.21
NIF3L1-208ENST00000436412 TCOF1Q13428 1488 aaKnown RBP13.74□□□□□ -0.21
NIF3L1-208ENST00000436412 CDC42BPAQ5VT25 1732 aa13.74□□□□□ -0.21
NIF3L1-208ENST00000436412 FOXK1P85037 733 aa13.74□□□□□ -0.21
NIF3L1-208ENST00000436412 KIAA1107Q9UPP5 1409 aa13.73□□□□□ -0.21
NIF3L1-208ENST00000436412 ZNF142P52746 1687 aaPredicted RBP13.73□□□□□ -0.21
NIF3L1-208ENST00000436412 SPNS2Q8IVW8 549 aa13.73□□□□□ -0.21
NIF3L1-208ENST00000436412 ZNF777Q9ULD5 760 aaPredicted RBP13.73□□□□□ -0.21
NIF3L1-208ENST00000436412 PCDHGA4Q9Y5G9 962 aa13.72□□□□□ -0.21
NIF3L1-208ENST00000436412 PLEKHH2Q8IVE3 1493 aa13.72□□□□□ -0.21
NIF3L1-208ENST00000436412 PTPRKQ15262 1439 aa13.72□□□□□ -0.21
NIF3L1-208ENST00000436412 HNRNPMP52272 730 aaKnown RBP eCLIP13.71□□□□□ -0.21
NIF3L1-208ENST00000436412 DSG2Q14126 1118 aa13.71□□□□□ -0.21
NIF3L1-208ENST00000436412 CEP170BQ9Y4F5 1589 aaPredicted RBP13.71□□□□□ -0.22
NIF3L1-208ENST00000436412 SUPT6HQ7KZ85 1726 aaKnown RBP13.7□□□□□ -0.22
NIF3L1-208ENST00000436412 ATP7AQ04656 1500 aa13.7□□□□□ -0.22
NIF3L1-208ENST00000436412 SYCP2Q9BX26 1530 aa13.7□□□□□ -0.22
NIF3L1-208ENST00000436412 GPATCH8Q9UKJ3 1502 aaKnown RBP13.7□□□□□ -0.22
NIF3L1-208ENST00000436412 A2MP01023 1474 aa13.7□□□□□ -0.22
NIF3L1-208ENST00000436412 MYO3AQ8NEV4 1616 aa13.7□□□□□ -0.22
NIF3L1-208ENST00000436412 PLXNC1O60486 1568 aa13.7□□□□□ -0.22
NIF3L1-208ENST00000436412 FYCO1Q9BQS8 1478 aa13.69□□□□□ -0.22
NIF3L1-208ENST00000436412 GGT6Q6P531 493 aa13.69□□□□□ -0.22
NIF3L1-208ENST00000436412 PLPP6Q8IY26 295 aa13.69□□□□□ -0.22
NIF3L1-208ENST00000436412 CRISPLD2Q9H0B8 497 aa13.69□□□□□ -0.22
NIF3L1-208ENST00000436412 CLTCQ00610 1675 aaKnown RBP13.69□□□□□ -0.22
NIF3L1-208ENST00000436412 MMRN1Q13201 1228 aa13.68□□□□□ -0.22
NIF3L1-208ENST00000436412 CFDP1Q9UEE9 299 aaPredicted RBP13.68□□□□□ -0.22
NIF3L1-208ENST00000436412 ZNF316A6NFI3 1004 aaPredicted RBP13.67□□□□□ -0.22
NIF3L1-208ENST00000436412 TOM1O60784 492 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms