RNA–Protein interactions for RNA: ENST00000436354.2

UBXN1-203, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-203ENST00000436354 RBM33Q96EV2 1170 aaKnown RBP28.56■■■□□ 2.16
UBXN1-203ENST00000436354 RPRD2Q5VT52 1461 aaKnown RBP28.55■■■□□ 2.16
UBXN1-203ENST00000436354 MSH6P52701 1360 aa28.53■■■□□ 2.16
UBXN1-203ENST00000436354 HDGFP51858 240 aaKnown RBP28.5■■■□□ 2.15
UBXN1-203ENST00000436354 ANKRD50Q9ULJ7 1429 aa28.5■■■□□ 2.15
UBXN1-203ENST00000436354 POTEAQ6S8J7 498 aa28.48■■■□□ 2.15
UBXN1-203ENST00000436354 SLAIN2Q9P270 581 aa28.48■■■□□ 2.15
UBXN1-203ENST00000436354 PLEKHG1Q9ULL1 1385 aa28.48■■■□□ 2.15
UBXN1-203ENST00000436354 ZFYVE9O95405 1425 aa28.47■■■□□ 2.15
UBXN1-203ENST00000436354 FAM50AQ14320 339 aaKnown RBP28.47■■■□□ 2.15
UBXN1-203ENST00000436354 MYO5BQ9ULV0 1848 aa28.47■■■□□ 2.15
UBXN1-203ENST00000436354 CHD2O14647 1828 aaKnown RBP28.46■■■□□ 2.15
UBXN1-203ENST00000436354 PPP1R15AO75807 674 aaPredicted RBP28.46■■■□□ 2.15
UBXN1-203ENST00000436354 GCC2Q8IWJ2 1684 aa28.45■■■□□ 2.14
UBXN1-203ENST00000436354 RIMS2Q9UQ26 1411 aa28.44■■■□□ 2.14
UBXN1-203ENST00000436354 PHLPP1O60346 1717 aa28.43■■■□□ 2.14
UBXN1-203ENST00000436354 TMEM131LA2VDJ0 1609 aa28.43■■■□□ 2.14
UBXN1-203ENST00000436354 TBX22Q9Y458 520 aa28.4■■■□□ 2.14
UBXN1-203ENST00000436354 JCADQ9P266 1359 aa28.39■■■□□ 2.14
UBXN1-203ENST00000436354 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.39■■■□□ 2.14
UBXN1-203ENST00000436354 NCOA3Q9Y6Q9 1424 aa28.38■■■□□ 2.13
UBXN1-203ENST00000436354 UNC13BO14795 1591 aa28.36■■■□□ 2.13
UBXN1-203ENST00000436354 CHGAP10645 457 aaKnown RBP28.35■■■□□ 2.13
UBXN1-203ENST00000436354 C14orf37Q86TY3 774 aa28.34■■■□□ 2.13
UBXN1-203ENST00000436354 COL16A1Q07092 1604 aaPredicted RBP28.32■■■□□ 2.12
UBXN1-203ENST00000436354 E9PCH4 1651 aa28.32■■■□□ 2.12
UBXN1-203ENST00000436354 DIP2AQ14689 1571 aa28.31■■■□□ 2.12
UBXN1-203ENST00000436354 ADAMTS13Q76LX8 1427 aa28.3■■■□□ 2.12
UBXN1-203ENST00000436354 PIK3R4Q99570 1358 aa28.29■■■□□ 2.12
UBXN1-203ENST00000436354 CADPS2Q86UW7 1296 aa28.29■■■□□ 2.12
UBXN1-203ENST00000436354 C19orf44Q9H6X5 657 aa28.28■■■□□ 2.12
UBXN1-203ENST00000436354 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.27■■■□□ 2.12
UBXN1-203ENST00000436354 NUTM2DQ5VT03 806 aaPredicted RBP28.27■■■□□ 2.12
UBXN1-203ENST00000436354 IQGAP3Q86VI3 1631 aa28.26■■■□□ 2.11
UBXN1-203ENST00000436354 SPATA31A6Q5VVP1 1343 aa28.26■■■□□ 2.11
UBXN1-203ENST00000436354 ATF3P18847 181 aa28.26■■■□□ 2.11
UBXN1-203ENST00000436354 ROCK1Q13464 1354 aa28.24■■■□□ 2.11
UBXN1-203ENST00000436354 SETD1AO15047 1707 aaKnown RBP28.24■■■□□ 2.11
UBXN1-203ENST00000436354 TRPM2O94759 1503 aa28.23■■■□□ 2.11
UBXN1-203ENST00000436354 AHDC1Q5TGY3 1603 aaPredicted RBP28.22■■■□□ 2.11
UBXN1-203ENST00000436354 MEX3CQ5U5Q3 659 aaKnown RBP28.21■■■□□ 2.11
UBXN1-203ENST00000436354 LRP6O75581 1613 aa28.21■■■□□ 2.11
UBXN1-203ENST00000436354 ZNF772Q68DY9 489 aaPredicted RBP28.19■■■□□ 2.1
UBXN1-203ENST00000436354 AMOTL2Q9Y2J4 779 aa28.19■■■□□ 2.1
UBXN1-203ENST00000436354 SHPRHQ149N8 1683 aa28.19■■■□□ 2.1
UBXN1-203ENST00000436354 NUP155O75694 1391 aa28.18■■■□□ 2.1
UBXN1-203ENST00000436354 PTPRUQ92729 1446 aa28.14■■■□□ 2.1
UBXN1-203ENST00000436354 BRINP3Q76B58 766 aa28.13■■■□□ 2.09
UBXN1-203ENST00000436354 DCCP43146 1447 aa28.12■■■□□ 2.09
UBXN1-203ENST00000436354 XRN1Q8IZH2 1706 aaKnown RBP28.09■■■□□ 2.09
UBXN1-203ENST00000436354 SETBP1Q9Y6X0 1596 aa28.08■■■□□ 2.09
UBXN1-203ENST00000436354 NRXN3Q9Y4C0 1643 aa28.08■■■□□ 2.09
UBXN1-203ENST00000436354 SPHKAPQ2M3C7 1700 aa28.07■■■□□ 2.08
UBXN1-203ENST00000436354 ITGAEP38570 1179 aa28.07■■■□□ 2.08
UBXN1-203ENST00000436354 TRIM52Q96A61 297 aa28.07■■■□□ 2.08
UBXN1-203ENST00000436354 NUTM2BA6NNL0 878 aaPredicted RBP28.05■■■□□ 2.08
UBXN1-203ENST00000436354 NUTM2EB1AL46 878 aaPredicted RBP28.05■■■□□ 2.08
UBXN1-203ENST00000436354 NUTM2AQ8IVF1 878 aaPredicted RBP28.05■■■□□ 2.08
UBXN1-203ENST00000436354 ASXL1Q8IXJ9 1541 aa28.05■■■□□ 2.08
UBXN1-203ENST00000436354 RXRBP28702 533 aa28.04■■■□□ 2.08
UBXN1-203ENST00000436354 ZNF326Q5BKZ1 582 aaKnown RBP28.04■■■□□ 2.08
UBXN1-203ENST00000436354 UPF1Q92900 1129 aaKnown RBP eCLIP28.04■■■□□ 2.08
UBXN1-203ENST00000436354 MST1RQ04912 1400 aa28.02■■■□□ 2.08
UBXN1-203ENST00000436354 SETD5Q9C0A6 1442 aa28.02■■■□□ 2.08
UBXN1-203ENST00000436354 NHSL1Q5SYE7 1610 aa28.01■■■□□ 2.07
UBXN1-203ENST00000436354 METP08581 1390 aa28■■■□□ 2.07
UBXN1-203ENST00000436354 LRRC59Q96AG4 307 aaKnown RBP28■■■□□ 2.07
UBXN1-203ENST00000436354 CDK12Q9NYV4 1490 aaPredicted RBP27.98■■■□□ 2.07
UBXN1-203ENST00000436354 AFF2P51816 1311 aa27.97■■■□□ 2.07
UBXN1-203ENST00000436354 ADGRL3Q9HAR2 1447 aa27.96■■■□□ 2.07
UBXN1-203ENST00000436354 NEXMIFQ5QGS0 1516 aa27.92■■■□□ 2.06
UBXN1-203ENST00000436354 NALCNQ8IZF0 1738 aa27.92■■■□□ 2.06
UBXN1-203ENST00000436354 CLTCL1P53675 1640 aa27.92■■■□□ 2.06
UBXN1-203ENST00000436354 PNPLA6Q8IY17 1366 aa27.89■■■□□ 2.06
UBXN1-203ENST00000436354 KIF1BO60333 1816 aa27.89■■■□□ 2.06
UBXN1-203ENST00000436354 DDX17Q92841 729 aaKnown RBP27.88■■■□□ 2.05
UBXN1-203ENST00000436354 C8orf37Q96NL8 207 aa27.88■■■□□ 2.05
UBXN1-203ENST00000436354 PPARGC1BQ86YN6 1023 aaKnown RBP27.86■■■□□ 2.05
UBXN1-203ENST00000436354 QTRT2Q9H974 415 aaKnown RBP27.86■■■□□ 2.05
UBXN1-203ENST00000436354 RBM6P78332 1123 aaKnown RBP27.85■■■□□ 2.05
UBXN1-203ENST00000436354 C1orf167Q5SNV9 1468 aa27.84■■■□□ 2.05
UBXN1-203ENST00000436354 VGFO15240 615 aaPredicted RBP27.82■■■□□ 2.04
UBXN1-203ENST00000436354 PTCH1Q13635 1447 aa27.82■■■□□ 2.04
UBXN1-203ENST00000436354 LAMC1P11047 1609 aa27.81■■■□□ 2.04
UBXN1-203ENST00000436354 NGLY1Q96IV0 654 aa27.8■■■□□ 2.04
UBXN1-203ENST00000436354 RGS12O14924 1447 aa27.8■■■□□ 2.04
UBXN1-203ENST00000436354 ADAMTS2O95450 1211 aa27.78■■■□□ 2.04
UBXN1-203ENST00000436354 NAIPQ13075 1403 aa27.77■■■□□ 2.04
UBXN1-203ENST00000436354 ROBO2Q9HCK4 1378 aa27.76■■■□□ 2.03
UBXN1-203ENST00000436354 SOS2Q07890 1332 aaPredicted RBP27.76■■■□□ 2.03
UBXN1-203ENST00000436354 RPGRIP1LQ68CZ1 1315 aa27.75■■■□□ 2.03
UBXN1-203ENST00000436354 ORAI2Q96SN7 254 aa27.75■■■□□ 2.03
UBXN1-203ENST00000436354 PRAG1Q86YV5 1406 aa27.75■■■□□ 2.03
UBXN1-203ENST00000436354 RRBP1Q9P2E9 1410 aaKnown RBP27.72■■■□□ 2.03
UBXN1-203ENST00000436354 HFM1A2PYH4 1435 aa27.71■■■□□ 2.03
UBXN1-203ENST00000436354 USP21Q9UK80 565 aa27.7■■■□□ 2.02
UBXN1-203ENST00000436354 TRPC5Q9UL62 973 aaPredicted RBP27.68■■■□□ 2.02
UBXN1-203ENST00000436354 PPLO60437 1756 aa27.68■■■□□ 2.02
UBXN1-203ENST00000436354 ATAD2Q6PL18 1390 aa27.66■■■□□ 2.02
UBXN1-203ENST00000436354 FNBP4Q8N3X1 1017 aaPredicted RBP27.66■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms