RNA–Protein interactions for RNA: ENST00000435997.2

SPTLC1P4-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 4, humanhuman

BASIC

Gene SPTLC1P4, Length 260 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P4-201ENST00000435997 FAM50AQ14320 339 aaKnown RBP17.03■□□□□ 0.32
SPTLC1P4-201ENST00000435997 FAM135BQ49AJ0 1406 aa17.03■□□□□ 0.32
SPTLC1P4-201ENST00000435997 ROCK1Q13464 1354 aa17.02■□□□□ 0.32
SPTLC1P4-201ENST00000435997 KCNA6P17658 529 aa17.02■□□□□ 0.32
SPTLC1P4-201ENST00000435997 PLEKHG1Q9ULL1 1385 aa17■□□□□ 0.31
SPTLC1P4-201ENST00000435997 SLC26A8Q96RN1 970 aa16.99■□□□□ 0.31
SPTLC1P4-201ENST00000435997 TMEM131LA2VDJ0 1609 aa16.99■□□□□ 0.31
SPTLC1P4-201ENST00000435997 GCC2Q8IWJ2 1684 aa16.97■□□□□ 0.31
SPTLC1P4-201ENST00000435997 RIMS2Q9UQ26 1411 aa16.96■□□□□ 0.31
SPTLC1P4-201ENST00000435997 IQGAP3Q86VI3 1631 aa16.96■□□□□ 0.31
SPTLC1P4-201ENST00000435997 E9PCH4 1651 aa16.94■□□□□ 0.3
SPTLC1P4-201ENST00000435997 ADAMTS13Q76LX8 1427 aa16.94■□□□□ 0.3
SPTLC1P4-201ENST00000435997 ROBO1Q9Y6N7 1651 aa16.93■□□□□ 0.3
SPTLC1P4-201ENST00000435997 PROSER2Q86WR7 435 aaPredicted RBP16.92■□□□□ 0.3
SPTLC1P4-201ENST00000435997 RGS17Q9UGC6 210 aaPredicted RBP16.92■□□□□ 0.3
SPTLC1P4-201ENST00000435997 DIP2AQ14689 1571 aa16.91■□□□□ 0.3
SPTLC1P4-201ENST00000435997 RBM33Q96EV2 1170 aaKnown RBP16.91■□□□□ 0.3
SPTLC1P4-201ENST00000435997 MSH6P52701 1360 aa16.9■□□□□ 0.3
SPTLC1P4-201ENST00000435997 NCOA3Q9Y6Q9 1424 aa16.9■□□□□ 0.3
SPTLC1P4-201ENST00000435997 MYO5BQ9ULV0 1848 aa16.89■□□□□ 0.29
SPTLC1P4-201ENST00000435997 TBX22Q9Y458 520 aa16.89■□□□□ 0.29
SPTLC1P4-201ENST00000435997 HDGFP51858 240 aaKnown RBP16.88■□□□□ 0.29
SPTLC1P4-201ENST00000435997 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.88■□□□□ 0.29
SPTLC1P4-201ENST00000435997 CHD2O14647 1828 aaKnown RBP16.88■□□□□ 0.29
SPTLC1P4-201ENST00000435997 PIK3R4Q99570 1358 aa16.88■□□□□ 0.29
SPTLC1P4-201ENST00000435997 PPP1R15AO75807 674 aaPredicted RBP16.87■□□□□ 0.29
SPTLC1P4-201ENST00000435997 NUP155O75694 1391 aa16.87■□□□□ 0.29
SPTLC1P4-201ENST00000435997 BCANQ96GW7 911 aa16.84■□□□□ 0.29
SPTLC1P4-201ENST00000435997 SLAIN2Q9P270 581 aa16.84■□□□□ 0.29
SPTLC1P4-201ENST00000435997 COL16A1Q07092 1604 aaPredicted RBP16.83■□□□□ 0.28
SPTLC1P4-201ENST00000435997 SETBP1Q9Y6X0 1596 aa16.82■□□□□ 0.28
SPTLC1P4-201ENST00000435997 TRPM2O94759 1503 aa16.82■□□□□ 0.28
SPTLC1P4-201ENST00000435997 PTPRUQ92729 1446 aa16.82■□□□□ 0.28
SPTLC1P4-201ENST00000435997 NRXN3Q9Y4C0 1643 aa16.81■□□□□ 0.28
SPTLC1P4-201ENST00000435997 RRBP1Q9P2E9 1410 aaKnown RBP16.81■□□□□ 0.28
SPTLC1P4-201ENST00000435997 JCADQ9P266 1359 aa16.81■□□□□ 0.28
SPTLC1P4-201ENST00000435997 CHGAP10645 457 aaKnown RBP16.81■□□□□ 0.28
SPTLC1P4-201ENST00000435997 NUTM2DQ5VT03 806 aaPredicted RBP16.8■□□□□ 0.28
SPTLC1P4-201ENST00000435997 AHDC1Q5TGY3 1603 aaPredicted RBP16.8■□□□□ 0.28
SPTLC1P4-201ENST00000435997 DCCP43146 1447 aa16.79■□□□□ 0.28
SPTLC1P4-201ENST00000435997 XRN1Q8IZH2 1706 aaKnown RBP16.79■□□□□ 0.28
SPTLC1P4-201ENST00000435997 POTEAQ6S8J7 498 aa16.78■□□□□ 0.28
SPTLC1P4-201ENST00000435997 PIAS4Q8N2W9 510 aaPredicted RBP16.78■□□□□ 0.28
SPTLC1P4-201ENST00000435997 PHLPP1O60346 1717 aa16.78■□□□□ 0.28
SPTLC1P4-201ENST00000435997 SPHKAPQ2M3C7 1700 aa16.78■□□□□ 0.28
SPTLC1P4-201ENST00000435997 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.77■□□□□ 0.28
SPTLC1P4-201ENST00000435997 C19orf44Q9H6X5 657 aa16.77■□□□□ 0.28
SPTLC1P4-201ENST00000435997 ITGAEP38570 1179 aa16.76■□□□□ 0.27
SPTLC1P4-201ENST00000435997 CADPS2Q86UW7 1296 aa16.76■□□□□ 0.27
SPTLC1P4-201ENST00000435997 LRP6O75581 1613 aa16.76■□□□□ 0.27
SPTLC1P4-201ENST00000435997 AMOTL2Q9Y2J4 779 aa16.75■□□□□ 0.27
SPTLC1P4-201ENST00000435997 NAIPQ13075 1403 aa16.75■□□□□ 0.27
SPTLC1P4-201ENST00000435997 NEXMIFQ5QGS0 1516 aa16.75■□□□□ 0.27
SPTLC1P4-201ENST00000435997 CLTCL1P53675 1640 aa16.74■□□□□ 0.27
SPTLC1P4-201ENST00000435997 METP08581 1390 aa16.73■□□□□ 0.27
SPTLC1P4-201ENST00000435997 SPATA31A6Q5VVP1 1343 aa16.72■□□□□ 0.27
SPTLC1P4-201ENST00000435997 MST1RQ04912 1400 aa16.71■□□□□ 0.27
SPTLC1P4-201ENST00000435997 ATF3P18847 181 aa16.71■□□□□ 0.27
SPTLC1P4-201ENST00000435997 BRINP3Q76B58 766 aa16.71■□□□□ 0.27
SPTLC1P4-201ENST00000435997 C14orf37Q86TY3 774 aa16.71■□□□□ 0.27
SPTLC1P4-201ENST00000435997 PPARGC1BQ86YN6 1023 aaKnown RBP16.71■□□□□ 0.27
SPTLC1P4-201ENST00000435997 ASXL1Q8IXJ9 1541 aa16.7■□□□□ 0.26
SPTLC1P4-201ENST00000435997 SHPRHQ149N8 1683 aa16.7■□□□□ 0.26
SPTLC1P4-201ENST00000435997 HFM1A2PYH4 1435 aa16.7■□□□□ 0.26
SPTLC1P4-201ENST00000435997 PRAG1Q86YV5 1406 aa16.7■□□□□ 0.26
SPTLC1P4-201ENST00000435997 ADGRL3Q9HAR2 1447 aa16.7■□□□□ 0.26
SPTLC1P4-201ENST00000435997 SETD5Q9C0A6 1442 aa16.68■□□□□ 0.26
SPTLC1P4-201ENST00000435997 PTCH1Q13635 1447 aa16.67■□□□□ 0.26
SPTLC1P4-201ENST00000435997 NHSL1Q5SYE7 1610 aa16.66■□□□□ 0.26
SPTLC1P4-201ENST00000435997 ZNF326Q5BKZ1 582 aaKnown RBP16.65■□□□□ 0.26
SPTLC1P4-201ENST00000435997 SETD1AO15047 1707 aaKnown RBP16.65■□□□□ 0.26
SPTLC1P4-201ENST00000435997 NALCNQ8IZF0 1738 aa16.64■□□□□ 0.25
SPTLC1P4-201ENST00000435997 ZNF772Q68DY9 489 aaPredicted RBP16.61■□□□□ 0.25
SPTLC1P4-201ENST00000435997 ROBO2Q9HCK4 1378 aa16.61■□□□□ 0.25
SPTLC1P4-201ENST00000435997 LAMC1P11047 1609 aa16.6■□□□□ 0.25
SPTLC1P4-201ENST00000435997 C1orf167Q5SNV9 1468 aa16.59■□□□□ 0.25
SPTLC1P4-201ENST00000435997 KIF1BO60333 1816 aa16.59■□□□□ 0.25
SPTLC1P4-201ENST00000435997 RPGRIP1LQ68CZ1 1315 aa16.58■□□□□ 0.24
SPTLC1P4-201ENST00000435997 PNPLA6Q8IY17 1366 aa16.58■□□□□ 0.24
SPTLC1P4-201ENST00000435997 CDK12Q9NYV4 1490 aaPredicted RBP16.58■□□□□ 0.24
SPTLC1P4-201ENST00000435997 VGFO15240 615 aaPredicted RBP16.57■□□□□ 0.24
SPTLC1P4-201ENST00000435997 MEX3CQ5U5Q3 659 aaKnown RBP16.57■□□□□ 0.24
SPTLC1P4-201ENST00000435997 LRRC59Q96AG4 307 aaKnown RBP16.55■□□□□ 0.24
SPTLC1P4-201ENST00000435997 SLC4A1APQ9BWU0 796 aaKnown RBP16.55■□□□□ 0.24
SPTLC1P4-201ENST00000435997 DDX17Q92841 729 aaKnown RBP16.54■□□□□ 0.24
SPTLC1P4-201ENST00000435997 PPLO60437 1756 aa16.54■□□□□ 0.24
SPTLC1P4-201ENST00000435997 SPATA31E1Q6ZUB1 1445 aa16.53■□□□□ 0.24
SPTLC1P4-201ENST00000435997 SOS2Q07890 1332 aaPredicted RBP16.53■□□□□ 0.24
SPTLC1P4-201ENST00000435997 TECPR2O15040 1411 aa16.53■□□□□ 0.24
SPTLC1P4-201ENST00000435997 TRIM52Q96A61 297 aa16.52■□□□□ 0.24
SPTLC1P4-201ENST00000435997 CDC42BPGQ6DT37 1551 aa16.51■□□□□ 0.23
SPTLC1P4-201ENST00000435997 AFF2P51816 1311 aa16.51■□□□□ 0.23
SPTLC1P4-201ENST00000435997 NUTM2BA6NNL0 878 aaPredicted RBP16.51■□□□□ 0.23
SPTLC1P4-201ENST00000435997 NUTM2EB1AL46 878 aaPredicted RBP16.51■□□□□ 0.23
SPTLC1P4-201ENST00000435997 NUTM2AQ8IVF1 878 aaPredicted RBP16.51■□□□□ 0.23
SPTLC1P4-201ENST00000435997 CCDC144AA2RUR9 1427 aa16.5■□□□□ 0.23
SPTLC1P4-201ENST00000435997 RXRBP28702 533 aa16.49■□□□□ 0.23
SPTLC1P4-201ENST00000435997 UPF1Q92900 1129 aaKnown RBP eCLIP16.49■□□□□ 0.23
SPTLC1P4-201ENST00000435997 RGS12O14924 1447 aa16.48■□□□□ 0.23
SPTLC1P4-201ENST00000435997 PIK3C2GO75747 1445 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms