RNA–Protein interactions for RNA: ENST00000435354.1

LINC01006-204, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 2 BASIC

Gene LINC01006, Length 545 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-204ENST00000435354 NUP155O75694 1391 aa21.99■■□□□ 1.11
LINC01006-204ENST00000435354 RIMS2Q9UQ26 1411 aa21.97■■□□□ 1.11
LINC01006-204ENST00000435354 KCNA6P17658 529 aa21.96■■□□□ 1.11
LINC01006-204ENST00000435354 RRBP1Q9P2E9 1410 aaKnown RBP21.96■■□□□ 1.11
LINC01006-204ENST00000435354 NWD1Q149M9 1564 aa21.95■■□□□ 1.11
LINC01006-204ENST00000435354 MED1Q15648 1581 aaPredicted RBP21.95■■□□□ 1.1
LINC01006-204ENST00000435354 TMEM94Q12767 1356 aa21.94■■□□□ 1.1
LINC01006-204ENST00000435354 PLEKHG1Q9ULL1 1385 aa21.94■■□□□ 1.1
LINC01006-204ENST00000435354 SENP3Q9H4L4 574 aaPredicted RBP21.92■■□□□ 1.1
LINC01006-204ENST00000435354 NKTRP30414 1462 aaKnown RBP21.91■■□□□ 1.1
LINC01006-204ENST00000435354 BCANQ96GW7 911 aa21.91■■□□□ 1.1
LINC01006-204ENST00000435354 CHGAP10645 457 aaKnown RBP21.9■■□□□ 1.1
LINC01006-204ENST00000435354 CHD2O14647 1828 aaKnown RBP21.9■■□□□ 1.1
LINC01006-204ENST00000435354 SOCS7O14512 581 aa21.89■■□□□ 1.09
LINC01006-204ENST00000435354 PPP1R15AO75807 674 aaPredicted RBP21.89■■□□□ 1.09
LINC01006-204ENST00000435354 PROSER2Q86WR7 435 aaPredicted RBP21.89■■□□□ 1.09
LINC01006-204ENST00000435354 RBM33Q96EV2 1170 aaKnown RBP21.89■■□□□ 1.09
LINC01006-204ENST00000435354 HDGFP51858 240 aaKnown RBP21.88■■□□□ 1.09
LINC01006-204ENST00000435354 SPHKAPQ2M3C7 1700 aa21.87■■□□□ 1.09
LINC01006-204ENST00000435354 NUTM2DQ5VT03 806 aaPredicted RBP21.86■■□□□ 1.09
LINC01006-204ENST00000435354 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.86■■□□□ 1.09
LINC01006-204ENST00000435354 NAIPQ13075 1403 aa21.86■■□□□ 1.09
LINC01006-204ENST00000435354 ADAMTS13Q76LX8 1427 aa21.86■■□□□ 1.09
LINC01006-204ENST00000435354 FAM135BQ49AJ0 1406 aa21.84■■□□□ 1.09
LINC01006-204ENST00000435354 TBX22Q9Y458 520 aa21.84■■□□□ 1.09
LINC01006-204ENST00000435354 DIP2AQ14689 1571 aa21.82■■□□□ 1.08
LINC01006-204ENST00000435354 ROBO1Q9Y6N7 1651 aa21.8■■□□□ 1.08
LINC01006-204ENST00000435354 MSH6P52701 1360 aa21.79■■□□□ 1.08
LINC01006-204ENST00000435354 CLTCL1P53675 1640 aa21.78■■□□□ 1.08
LINC01006-204ENST00000435354 HFM1A2PYH4 1435 aa21.78■■□□□ 1.08
LINC01006-204ENST00000435354 NRXN3Q9Y4C0 1643 aa21.77■■□□□ 1.08
LINC01006-204ENST00000435354 PIK3R4Q99570 1358 aa21.76■■□□□ 1.07
LINC01006-204ENST00000435354 TRPM2O94759 1503 aa21.76■■□□□ 1.07
LINC01006-204ENST00000435354 SETBP1Q9Y6X0 1596 aa21.74■■□□□ 1.07
LINC01006-204ENST00000435354 PTPRUQ92729 1446 aa21.74■■□□□ 1.07
LINC01006-204ENST00000435354 NCOA3Q9Y6Q9 1424 aa21.73■■□□□ 1.07
LINC01006-204ENST00000435354 SLAIN2Q9P270 581 aa21.72■■□□□ 1.07
LINC01006-204ENST00000435354 NEXMIFQ5QGS0 1516 aa21.71■■□□□ 1.07
LINC01006-204ENST00000435354 PHF23Q9BUL5 403 aaPredicted RBP21.71■■□□□ 1.07
LINC01006-204ENST00000435354 ZNF326Q5BKZ1 582 aaKnown RBP21.7■■□□□ 1.06
LINC01006-204ENST00000435354 XRN1Q8IZH2 1706 aaKnown RBP21.69■■□□□ 1.06
LINC01006-204ENST00000435354 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.69■■□□□ 1.06
LINC01006-204ENST00000435354 KIF1BO60333 1816 aa21.69■■□□□ 1.06
LINC01006-204ENST00000435354 AMOTL2Q9Y2J4 779 aa21.69■■□□□ 1.06
LINC01006-204ENST00000435354 TRIM52Q96A61 297 aa21.68■■□□□ 1.06
LINC01006-204ENST00000435354 PHLPP1O60346 1717 aa21.66■■□□□ 1.06
LINC01006-204ENST00000435354 METP08581 1390 aa21.66■■□□□ 1.06
LINC01006-204ENST00000435354 C14orf37Q86TY3 774 aa21.66■■□□□ 1.06
LINC01006-204ENST00000435354 C19orf44Q9H6X5 657 aa21.65■■□□□ 1.06
LINC01006-204ENST00000435354 SLC4A1APQ9BWU0 796 aaKnown RBP21.64■■□□□ 1.05
LINC01006-204ENST00000435354 RGS17Q9UGC6 210 aaPredicted RBP21.64■■□□□ 1.05
LINC01006-204ENST00000435354 COL16A1Q07092 1604 aaPredicted RBP21.62■■□□□ 1.05
LINC01006-204ENST00000435354 CADPS2Q86UW7 1296 aa21.62■■□□□ 1.05
LINC01006-204ENST00000435354 ATF3P18847 181 aa21.6■■□□□ 1.05
LINC01006-204ENST00000435354 SETD1AO15047 1707 aaKnown RBP21.59■■□□□ 1.05
LINC01006-204ENST00000435354 DCCP43146 1447 aa21.58■■□□□ 1.05
LINC01006-204ENST00000435354 AHDC1Q5TGY3 1603 aaPredicted RBP21.58■■□□□ 1.04
LINC01006-204ENST00000435354 FOXD1Q16676 465 aa21.57■■□□□ 1.04
LINC01006-204ENST00000435354 JCADQ9P266 1359 aa21.57■■□□□ 1.04
LINC01006-204ENST00000435354 PPLO60437 1756 aa21.56■■□□□ 1.04
LINC01006-204ENST00000435354 VGFO15240 615 aaPredicted RBP21.54■■□□□ 1.04
LINC01006-204ENST00000435354 NALCNQ8IZF0 1738 aa21.54■■□□□ 1.04
LINC01006-204ENST00000435354 RPGRIP1LQ68CZ1 1315 aa21.54■■□□□ 1.04
LINC01006-204ENST00000435354 BRINP3Q76B58 766 aa21.53■■□□□ 1.04
LINC01006-204ENST00000435354 MST1RQ04912 1400 aa21.53■■□□□ 1.04
LINC01006-204ENST00000435354 ADGRL3Q9HAR2 1447 aa21.53■■□□□ 1.04
LINC01006-204ENST00000435354 ASXL1Q8IXJ9 1541 aa21.51■■□□□ 1.03
LINC01006-204ENST00000435354 POTEAQ6S8J7 498 aa21.5■■□□□ 1.03
LINC01006-204ENST00000435354 MPHOSPH9Q99550 1183 aa21.5■■□□□ 1.03
LINC01006-204ENST00000435354 PTCH1Q13635 1447 aa21.49■■□□□ 1.03
LINC01006-204ENST00000435354 LRP6O75581 1613 aa21.49■■□□□ 1.03
LINC01006-204ENST00000435354 SHPRHQ149N8 1683 aa21.49■■□□□ 1.03
LINC01006-204ENST00000435354 ROBO2Q9HCK4 1378 aa21.48■■□□□ 1.03
LINC01006-204ENST00000435354 CCDC144AA2RUR9 1427 aa21.48■■□□□ 1.03
LINC01006-204ENST00000435354 PRAG1Q86YV5 1406 aa21.48■■□□□ 1.03
LINC01006-204ENST00000435354 SPATA31E1Q6ZUB1 1445 aa21.47■■□□□ 1.03
LINC01006-204ENST00000435354 NHSL1Q5SYE7 1610 aa21.47■■□□□ 1.03
LINC01006-204ENST00000435354 SPATA31A6Q5VVP1 1343 aa21.46■■□□□ 1.03
LINC01006-204ENST00000435354 IFT172Q9UG01 1749 aa21.46■■□□□ 1.03
LINC01006-204ENST00000435354 ADGRF5Q8IZF2 1346 aa21.44■■□□□ 1.02
LINC01006-204ENST00000435354 SETD5Q9C0A6 1442 aa21.42■■□□□ 1.02
LINC01006-204ENST00000435354 C1orf167Q5SNV9 1468 aa21.41■■□□□ 1.02
LINC01006-204ENST00000435354 RGL3Q3MIN7 710 aa21.41■■□□□ 1.02
LINC01006-204ENST00000435354 DDX17Q92841 729 aaKnown RBP21.4■■□□□ 1.02
LINC01006-204ENST00000435354 ANKRD30BQ9BXX2 1392 aa21.39■■□□□ 1.02
LINC01006-204ENST00000435354 LAMC1P11047 1609 aa21.37■■□□□ 1.01
LINC01006-204ENST00000435354 MEX3CQ5U5Q3 659 aaKnown RBP21.36■■□□□ 1.01
LINC01006-204ENST00000435354 PIK3C2GO75747 1445 aa21.36■■□□□ 1.01
LINC01006-204ENST00000435354 RAB3GAP2Q9H2M9 1393 aa21.36■■□□□ 1.01
LINC01006-204ENST00000435354 ACIN1Q9UKV3 1341 aaKnown RBP21.35■■□□□ 1.01
LINC01006-204ENST00000435354 TECPR2O15040 1411 aa21.35■■□□□ 1.01
LINC01006-204ENST00000435354 NUTM2BA6NNL0 878 aaPredicted RBP21.34■■□□□ 1.01
LINC01006-204ENST00000435354 NUTM2EB1AL46 878 aaPredicted RBP21.34■■□□□ 1.01
LINC01006-204ENST00000435354 NUTM2AQ8IVF1 878 aaPredicted RBP21.34■■□□□ 1.01
LINC01006-204ENST00000435354 ORAI2Q96SN7 254 aa21.34■■□□□ 1.01
LINC01006-204ENST00000435354 CDC42BPGQ6DT37 1551 aa21.34■■□□□ 1.01
LINC01006-204ENST00000435354 LRRC59Q96AG4 307 aaKnown RBP21.33■■□□□ 1.01
LINC01006-204ENST00000435354 LRPPRCP42704 1394 aaKnown RBP21.33■■□□□ 1
LINC01006-204ENST00000435354 PNPLA6Q8IY17 1366 aa21.33■■□□□ 1
LINC01006-204ENST00000435354 KNDC1Q76NI1 1749 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms