RNA–Protein interactions for RNA: ENST00000435024.1

LINC00460-201, long intergenic non-protein coding RNA 460, humanhuman

TSL 1 (best) BASIC

Gene LINC00460, Length 631 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00460-201ENST00000435024 NCKAP5LQ9HCH0 1330 aa11.29□□□□□ -0.6
LINC00460-201ENST00000435024 CLTCL1P53675 1640 aa11.28□□□□□ -0.6
LINC00460-201ENST00000435024 SCAF11Q99590 1463 aaKnown RBP11.28□□□□□ -0.6
LINC00460-201ENST00000435024 SLIT1O75093 1534 aa11.28□□□□□ -0.6
LINC00460-201ENST00000435024 TMEM131LA2VDJ0 1609 aa11.27□□□□□ -0.6
LINC00460-201ENST00000435024 RIMS2Q9UQ26 1411 aa11.27□□□□□ -0.6
LINC00460-201ENST00000435024 POLR1AO95602 1720 aaPredicted RBP11.27□□□□□ -0.61
LINC00460-201ENST00000435024 VGFO15240 615 aaPredicted RBP11.27□□□□□ -0.61
LINC00460-201ENST00000435024 ZEB1P37275 1124 aaPredicted RBP11.27□□□□□ -0.61
LINC00460-201ENST00000435024 POTEHQ6S545 545 aa11.27□□□□□ -0.61
LINC00460-201ENST00000435024 ANKRD30BQ9BXX2 1392 aa11.27□□□□□ -0.61
LINC00460-201ENST00000435024 RGL3Q3MIN7 710 aa11.26□□□□□ -0.61
LINC00460-201ENST00000435024 NPHP4O75161 1426 aaPredicted RBP11.26□□□□□ -0.61
LINC00460-201ENST00000435024 ARHGAP23Q9P227 1491 aa11.25□□□□□ -0.61
LINC00460-201ENST00000435024 STAC3Q96MF2 364 aa11.25□□□□□ -0.61
LINC00460-201ENST00000435024 MYO5BQ9ULV0 1848 aa11.24□□□□□ -0.61
LINC00460-201ENST00000435024 DHX57Q6P158 1386 aaKnown RBP11.24□□□□□ -0.61
LINC00460-201ENST00000435024 MED14O60244 1454 aa11.24□□□□□ -0.61
LINC00460-201ENST00000435024 LTKP29376 864 aa11.23□□□□□ -0.61
LINC00460-201ENST00000435024 NEURL4Q96JN8 1562 aa11.23□□□□□ -0.61
LINC00460-201ENST00000435024 STRCQ7RTU9 1775 aa11.23□□□□□ -0.61
LINC00460-201ENST00000435024 ZFYVE9O95405 1425 aa11.22□□□□□ -0.61
LINC00460-201ENST00000435024 IQGAP1P46940 1657 aa11.22□□□□□ -0.61
LINC00460-201ENST00000435024 NUTM2DQ5VT03 806 aaPredicted RBP11.22□□□□□ -0.61
LINC00460-201ENST00000435024 CCER1Q8TC90 406 aaPredicted RBP11.22□□□□□ -0.61
LINC00460-201ENST00000435024 PLEKHG1Q9ULL1 1385 aa11.22□□□□□ -0.61
LINC00460-201ENST00000435024 CLSPNQ9HAW4 1339 aa11.21□□□□□ -0.61
LINC00460-201ENST00000435024 NEUROD1Q13562 356 aa11.21□□□□□ -0.61
LINC00460-201ENST00000435024 SPATA31E1Q6ZUB1 1445 aa11.2□□□□□ -0.62
LINC00460-201ENST00000435024 DCAF11Q8TEB1 546 aa11.19□□□□□ -0.62
LINC00460-201ENST00000435024 NEXMIFQ5QGS0 1516 aa11.19□□□□□ -0.62
LINC00460-201ENST00000435024 SLC26A8Q96RN1 970 aa11.18□□□□□ -0.62
LINC00460-201ENST00000435024 TBX22Q9Y458 520 aa11.18□□□□□ -0.62
LINC00460-201ENST00000435024 DIP2AQ14689 1571 aa11.18□□□□□ -0.62
LINC00460-201ENST00000435024 TONSLQ96HA7 1378 aa11.17□□□□□ -0.62
LINC00460-201ENST00000435024 KDM2AQ9Y2K7 1162 aa11.17□□□□□ -0.62
LINC00460-201ENST00000435024 PPLO60437 1756 aa11.17□□□□□ -0.62
LINC00460-201ENST00000435024 SIN3AQ96ST3 1273 aa11.16□□□□□ -0.62
LINC00460-201ENST00000435024 PIK3R4Q99570 1358 aa11.16□□□□□ -0.62
LINC00460-201ENST00000435024 MYOM2P54296 1465 aa11.15□□□□□ -0.62
LINC00460-201ENST00000435024 SETBP1Q9Y6X0 1596 aa11.15□□□□□ -0.62
LINC00460-201ENST00000435024 KCNA6P17658 529 aa11.14□□□□□ -0.63
LINC00460-201ENST00000435024 CPS1P31327 1500 aa11.14□□□□□ -0.63
LINC00460-201ENST00000435024 ADGRF5Q8IZF2 1346 aa11.13□□□□□ -0.63
LINC00460-201ENST00000435024 ZNF335Q9H4Z2 1342 aaPredicted RBP11.13□□□□□ -0.63
LINC00460-201ENST00000435024 IFT172Q9UG01 1749 aa11.13□□□□□ -0.63
LINC00460-201ENST00000435024 TIMELESSQ9UNS1 1208 aa11.13□□□□□ -0.63
LINC00460-201ENST00000435024 L3MBTL2Q969R5 705 aa11.12□□□□□ -0.63
LINC00460-201ENST00000435024 PIK3C2GO75747 1445 aa11.11□□□□□ -0.63
LINC00460-201ENST00000435024 ADAMTS13Q76LX8 1427 aa11.11□□□□□ -0.63
LINC00460-201ENST00000435024 LAMC1P11047 1609 aa11.11□□□□□ -0.63
LINC00460-201ENST00000435024 C14orf37Q86TY3 774 aa11.11□□□□□ -0.63
LINC00460-201ENST00000435024 PROSER2Q86WR7 435 aaPredicted RBP11.11□□□□□ -0.63
LINC00460-201ENST00000435024 ALKQ9UM73 1620 aa11.1□□□□□ -0.63
LINC00460-201ENST00000435024 CERKQ8TCT0 537 aa11.1□□□□□ -0.63
LINC00460-201ENST00000435024 C14orf93Q9H972 538 aaKnown RBP11.1□□□□□ -0.63
LINC00460-201ENST00000435024 AMOTL2Q9Y2J4 779 aa11.1□□□□□ -0.63
LINC00460-201ENST00000435024 NKTRP30414 1462 aaKnown RBP11.09□□□□□ -0.63
LINC00460-201ENST00000435024 NRXN1Q9ULB1 1477 aa11.08□□□□□ -0.64
LINC00460-201ENST00000435024 CHD2O14647 1828 aaKnown RBP11.08□□□□□ -0.64
LINC00460-201ENST00000435024 CFAP70Q5T0N1 1121 aa11.08□□□□□ -0.64
LINC00460-201ENST00000435024 IQSEC2Q5JU85 1478 aa11.07□□□□□ -0.64
LINC00460-201ENST00000435024 METP08581 1390 aa11.07□□□□□ -0.64
LINC00460-201ENST00000435024 NRXN3Q9Y4C0 1643 aa11.07□□□□□ -0.64
LINC00460-201ENST00000435024 STK26Q9P289 416 aa11.07□□□□□ -0.64
LINC00460-201ENST00000435024 NWD1Q149M9 1564 aa11.07□□□□□ -0.64
LINC00460-201ENST00000435024 LTBP4Q8N2S1 1624 aa11.06□□□□□ -0.64
LINC00460-201ENST00000435024 LRPPRCP42704 1394 aaKnown RBP11.05□□□□□ -0.64
LINC00460-201ENST00000435024 MSH6P52701 1360 aa11.05□□□□□ -0.64
LINC00460-201ENST00000435024 TOM1O60784 492 aa11.05□□□□□ -0.64
LINC00460-201ENST00000435024 TMEM132EQ6IEE7 984 aa11.05□□□□□ -0.64
LINC00460-201ENST00000435024 PRAG1Q86YV5 1406 aa11.05□□□□□ -0.64
LINC00460-201ENST00000435024 POGKQ9P215 609 aa11.05□□□□□ -0.64
LINC00460-201ENST00000435024 NCOA3Q9Y6Q9 1424 aa11.05□□□□□ -0.64
LINC00460-201ENST00000435024 TMEM94Q12767 1356 aa11.04□□□□□ -0.64
LINC00460-201ENST00000435024 KIAA1210Q9ULL0 1709 aa11.04□□□□□ -0.64
LINC00460-201ENST00000435024 YTHDC2Q9H6S0 1430 aaKnown RBP11.04□□□□□ -0.64
LINC00460-201ENST00000435024 LRRC7Q96NW7 1537 aa11.04□□□□□ -0.64
LINC00460-201ENST00000435024 ROCK2O75116 1388 aaKnown RBP11.03□□□□□ -0.64
LINC00460-201ENST00000435024 ABCC11Q96J66 1382 aa11.03□□□□□ -0.64
LINC00460-201ENST00000435024 PTCH1Q13635 1447 aa11.03□□□□□ -0.64
LINC00460-201ENST00000435024 ATF3P18847 181 aa11.03□□□□□ -0.64
LINC00460-201ENST00000435024 SIRT1Q96EB6 747 aa11.03□□□□□ -0.64
LINC00460-201ENST00000435024 C19orf44Q9H6X5 657 aa11.03□□□□□ -0.64
LINC00460-201ENST00000435024 PTPRUQ92729 1446 aa11.02□□□□□ -0.64
LINC00460-201ENST00000435024 SETD1AO15047 1707 aaKnown RBP11.02□□□□□ -0.65
LINC00460-201ENST00000435024 XRN1Q8IZH2 1706 aaKnown RBP11.02□□□□□ -0.65
LINC00460-201ENST00000435024 UBAP1LF5GYI3 381 aa11.02□□□□□ -0.65
LINC00460-201ENST00000435024 CADPS2Q86UW7 1296 aa11.02□□□□□ -0.65
LINC00460-201ENST00000435024 PIAS4Q8N2W9 510 aaPredicted RBP11.02□□□□□ -0.65
LINC00460-201ENST00000435024 TRAK1Q9UPV9 953 aa11.02□□□□□ -0.65
LINC00460-201ENST00000435024 EIF3AQ14152 1382 aaKnown RBP11.02□□□□□ -0.65
LINC00460-201ENST00000435024 STRCP1A6NGW2 1772 aa11.01□□□□□ -0.65
LINC00460-201ENST00000435024 CARD11Q9BXL7 1154 aa11.01□□□□□ -0.65
LINC00460-201ENST00000435024 FAM135BQ49AJ0 1406 aa11.01□□□□□ -0.65
LINC00460-201ENST00000435024 SCAF1Q9H7N4 1312 aaKnown RBP11□□□□□ -0.65
LINC00460-201ENST00000435024 KNDC1Q76NI1 1749 aa11□□□□□ -0.65
LINC00460-201ENST00000435024 TECPR2O15040 1411 aa11□□□□□ -0.65
LINC00460-201ENST00000435024 SLC24A1O60721 1099 aa10.99□□□□□ -0.65
LINC00460-201ENST00000435024 RBM33Q96EV2 1170 aaKnown RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms