RNA–Protein interactions for RNA: ENST00000435022.5

HMG20B-205, Transcript of high mobility group 20B, humanhuman

TSL 5

Gene HMG20B, Length 616 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-205ENST00000435022 NWD1Q149M9 1564 aa34.35■■■■□ 3.09
HMG20B-205ENST00000435022 SOCS7O14512 581 aa34.32■■■■□ 3.08
HMG20B-205ENST00000435022 ITGAEP38570 1179 aa34.31■■■■□ 3.08
HMG20B-205ENST00000435022 RIMS2Q9UQ26 1411 aa34.3■■■■□ 3.08
HMG20B-205ENST00000435022 TMEM94Q12767 1356 aa34.29■■■■□ 3.08
HMG20B-205ENST00000435022 KCNA6P17658 529 aa34.28■■■■□ 3.08
HMG20B-205ENST00000435022 PLEKHG1Q9ULL1 1385 aa34.26■■■■□ 3.08
HMG20B-205ENST00000435022 SENP3Q9H4L4 574 aaPredicted RBP34.25■■■■□ 3.07
HMG20B-205ENST00000435022 NKTRP30414 1462 aaKnown RBP34.25■■■■□ 3.07
HMG20B-205ENST00000435022 NUP155O75694 1391 aa34.24■■■■□ 3.07
HMG20B-205ENST00000435022 RBM33Q96EV2 1170 aaKnown RBP34.23■■■■□ 3.07
HMG20B-205ENST00000435022 CHD2O14647 1828 aaKnown RBP34.21■■■■□ 3.07
HMG20B-205ENST00000435022 RRBP1Q9P2E9 1410 aaKnown RBP34.21■■■■□ 3.07
HMG20B-205ENST00000435022 ADAMTS13Q76LX8 1427 aa34.17■■■■□ 3.06
HMG20B-205ENST00000435022 PROSER2Q86WR7 435 aaPredicted RBP34.16■■■■□ 3.06
HMG20B-205ENST00000435022 FAM135BQ49AJ0 1406 aa34.14■■■■□ 3.06
HMG20B-205ENST00000435022 CHGAP10645 457 aaKnown RBP34.14■■■■□ 3.06
HMG20B-205ENST00000435022 SPHKAPQ2M3C7 1700 aa34.13■■■■□ 3.05
HMG20B-205ENST00000435022 NUTM2DQ5VT03 806 aaPredicted RBP34.13■■■■□ 3.05
HMG20B-205ENST00000435022 BCANQ96GW7 911 aa34.13■■■■□ 3.05
HMG20B-205ENST00000435022 ROBO1Q9Y6N7 1651 aa34.12■■■■□ 3.05
HMG20B-205ENST00000435022 PPP1R15AO75807 674 aaPredicted RBP34.12■■■■□ 3.05
HMG20B-205ENST00000435022 DIP2AQ14689 1571 aa34.07■■■■□ 3.05
HMG20B-205ENST00000435022 NAIPQ13075 1403 aa34.07■■■■□ 3.04
HMG20B-205ENST00000435022 TBX22Q9Y458 520 aa34.07■■■■□ 3.04
HMG20B-205ENST00000435022 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.06■■■■□ 3.04
HMG20B-205ENST00000435022 NRXN3Q9Y4C0 1643 aa34.05■■■■□ 3.04
HMG20B-205ENST00000435022 HDGFP51858 240 aaKnown RBP34.05■■■■□ 3.04
HMG20B-205ENST00000435022 CLTCL1P53675 1640 aa34.01■■■■□ 3.04
HMG20B-205ENST00000435022 MSH6P52701 1360 aa34.01■■■■□ 3.04
HMG20B-205ENST00000435022 PTPRUQ92729 1446 aa34■■■■□ 3.03
HMG20B-205ENST00000435022 TRPM2O94759 1503 aa33.97■■■■□ 3.03
HMG20B-205ENST00000435022 SETBP1Q9Y6X0 1596 aa33.96■■■■□ 3.03
HMG20B-205ENST00000435022 PIK3R4Q99570 1358 aa33.96■■■■□ 3.03
HMG20B-205ENST00000435022 PHF23Q9BUL5 403 aaPredicted RBP33.93■■■■□ 3.02
HMG20B-205ENST00000435022 NCOA3Q9Y6Q9 1424 aa33.93■■■■□ 3.02
HMG20B-205ENST00000435022 XRN1Q8IZH2 1706 aaKnown RBP33.93■■■■□ 3.02
HMG20B-205ENST00000435022 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.93■■■■□ 3.02
HMG20B-205ENST00000435022 SLAIN2Q9P270 581 aa33.92■■■■□ 3.02
HMG20B-205ENST00000435022 HFM1A2PYH4 1435 aa33.92■■■■□ 3.02
HMG20B-205ENST00000435022 NEXMIFQ5QGS0 1516 aa33.92■■■■□ 3.02
HMG20B-205ENST00000435022 RGS17Q9UGC6 210 aaPredicted RBP33.91■■■■□ 3.02
HMG20B-205ENST00000435022 PHLPP1O60346 1717 aa33.89■■■■□ 3.02
HMG20B-205ENST00000435022 COL16A1Q07092 1604 aaPredicted RBP33.86■■■■□ 3.01
HMG20B-205ENST00000435022 AMOTL2Q9Y2J4 779 aa33.85■■■■□ 3.01
HMG20B-205ENST00000435022 METP08581 1390 aa33.83■■■■□ 3.01
HMG20B-205ENST00000435022 KIF1BO60333 1816 aa33.82■■■■□ 3
HMG20B-205ENST00000435022 ZNF326Q5BKZ1 582 aaKnown RBP33.81■■■■□ 3
HMG20B-205ENST00000435022 C19orf44Q9H6X5 657 aa33.78■■■■□ 3
HMG20B-205ENST00000435022 C14orf37Q86TY3 774 aa33.77■■■■□ 3
HMG20B-205ENST00000435022 SETD1AO15047 1707 aaKnown RBP33.76■■■□□ 2.99
HMG20B-205ENST00000435022 AHDC1Q5TGY3 1603 aaPredicted RBP33.75■■■□□ 2.99
HMG20B-205ENST00000435022 CADPS2Q86UW7 1296 aa33.73■■■□□ 2.99
HMG20B-205ENST00000435022 TRIM52Q96A61 297 aa33.73■■■□□ 2.99
HMG20B-205ENST00000435022 DCCP43146 1447 aa33.71■■■□□ 2.99
HMG20B-205ENST00000435022 JCADQ9P266 1359 aa33.71■■■□□ 2.99
HMG20B-205ENST00000435022 NALCNQ8IZF0 1738 aa33.69■■■□□ 2.98
HMG20B-205ENST00000435022 ATF3P18847 181 aa33.68■■■□□ 2.98
HMG20B-205ENST00000435022 POTEAQ6S8J7 498 aa33.67■■■□□ 2.98
HMG20B-205ENST00000435022 SLC4A1APQ9BWU0 796 aaKnown RBP33.67■■■□□ 2.98
HMG20B-205ENST00000435022 LRP6O75581 1613 aa33.67■■■□□ 2.98
HMG20B-205ENST00000435022 PPLO60437 1756 aa33.67■■■□□ 2.98
HMG20B-205ENST00000435022 MST1RQ04912 1400 aa33.66■■■□□ 2.98
HMG20B-205ENST00000435022 BRINP3Q76B58 766 aa33.65■■■□□ 2.98
HMG20B-205ENST00000435022 ASXL1Q8IXJ9 1541 aa33.63■■■□□ 2.97
HMG20B-205ENST00000435022 ADGRL3Q9HAR2 1447 aa33.63■■■□□ 2.97
HMG20B-205ENST00000435022 FOXD1Q16676 465 aa33.63■■■□□ 2.97
HMG20B-205ENST00000435022 SHPRHQ149N8 1683 aa33.63■■■□□ 2.97
HMG20B-205ENST00000435022 NHSL1Q5SYE7 1610 aa33.59■■■□□ 2.97
HMG20B-205ENST00000435022 PTCH1Q13635 1447 aa33.56■■■□□ 2.96
HMG20B-205ENST00000435022 PRAG1Q86YV5 1406 aa33.56■■■□□ 2.96
HMG20B-205ENST00000435022 ROBO2Q9HCK4 1378 aa33.55■■■□□ 2.96
HMG20B-205ENST00000435022 VGFO15240 615 aaPredicted RBP33.54■■■□□ 2.96
HMG20B-205ENST00000435022 RPGRIP1LQ68CZ1 1315 aa33.53■■■□□ 2.96
HMG20B-205ENST00000435022 SPATA31A6Q5VVP1 1343 aa33.52■■■□□ 2.96
HMG20B-205ENST00000435022 SPATA31E1Q6ZUB1 1445 aa33.51■■■□□ 2.95
HMG20B-205ENST00000435022 IFT172Q9UG01 1749 aa33.5■■■□□ 2.95
HMG20B-205ENST00000435022 SETD5Q9C0A6 1442 aa33.48■■■□□ 2.95
HMG20B-205ENST00000435022 DDX17Q92841 729 aaKnown RBP33.47■■■□□ 2.95
HMG20B-205ENST00000435022 CCDC144AA2RUR9 1427 aa33.46■■■□□ 2.95
HMG20B-205ENST00000435022 C1orf167Q5SNV9 1468 aa33.46■■■□□ 2.95
HMG20B-205ENST00000435022 MPHOSPH9Q99550 1183 aa33.46■■■□□ 2.95
HMG20B-205ENST00000435022 ADGRF5Q8IZF2 1346 aa33.45■■■□□ 2.95
HMG20B-205ENST00000435022 LAMC1P11047 1609 aa33.42■■■□□ 2.94
HMG20B-205ENST00000435022 RGL3Q3MIN7 710 aa33.36■■■□□ 2.93
HMG20B-205ENST00000435022 PNPLA6Q8IY17 1366 aa33.35■■■□□ 2.93
HMG20B-205ENST00000435022 MEX3CQ5U5Q3 659 aaKnown RBP33.35■■■□□ 2.93
HMG20B-205ENST00000435022 NUTM2BA6NNL0 878 aaPredicted RBP33.33■■■□□ 2.93
HMG20B-205ENST00000435022 NUTM2EB1AL46 878 aaPredicted RBP33.33■■■□□ 2.93
HMG20B-205ENST00000435022 NUTM2AQ8IVF1 878 aaPredicted RBP33.33■■■□□ 2.93
HMG20B-205ENST00000435022 ORAI2Q96SN7 254 aa33.33■■■□□ 2.93
HMG20B-205ENST00000435022 PIK3C2GO75747 1445 aa33.33■■■□□ 2.93
HMG20B-205ENST00000435022 CDC42BPGQ6DT37 1551 aa33.33■■■□□ 2.93
HMG20B-205ENST00000435022 TECPR2O15040 1411 aa33.32■■■□□ 2.92
HMG20B-205ENST00000435022 ANKRD30BQ9BXX2 1392 aa33.32■■■□□ 2.92
HMG20B-205ENST00000435022 KNDC1Q76NI1 1749 aa33.31■■■□□ 2.92
HMG20B-205ENST00000435022 LRRC59Q96AG4 307 aaKnown RBP33.3■■■□□ 2.92
HMG20B-205ENST00000435022 LRPPRCP42704 1394 aaKnown RBP33.26■■■□□ 2.92
HMG20B-205ENST00000435022 ZNF772Q68DY9 489 aaPredicted RBP33.26■■■□□ 2.91
HMG20B-205ENST00000435022 SOS2Q07890 1332 aaPredicted RBP33.26■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms