RNA–Protein interactions for RNA: ENST00000434503.5

LMBR1-210, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-210ENST00000434503 NWD1Q149M9 1564 aa31.94■■■□□ 2.7
LMBR1-210ENST00000434503 NKTRP30414 1462 aaKnown RBP31.93■■■□□ 2.7
LMBR1-210ENST00000434503 RGS17Q9UGC6 210 aaPredicted RBP31.93■■■□□ 2.7
LMBR1-210ENST00000434503 ZFYVE9O95405 1425 aa31.92■■■□□ 2.7
LMBR1-210ENST00000434503 MYO5BQ9ULV0 1848 aa31.91■■■□□ 2.7
LMBR1-210ENST00000434503 ROBO1Q9Y6N7 1651 aa31.9■■■□□ 2.7
LMBR1-210ENST00000434503 PLEKHG1Q9ULL1 1385 aa31.88■■■□□ 2.69
LMBR1-210ENST00000434503 GCC2Q8IWJ2 1684 aa31.88■■■□□ 2.69
LMBR1-210ENST00000434503 RIMS2Q9UQ26 1411 aa31.87■■■□□ 2.69
LMBR1-210ENST00000434503 HDGFP51858 240 aaKnown RBP31.87■■■□□ 2.69
LMBR1-210ENST00000434503 TMEM131LA2VDJ0 1609 aa31.86■■■□□ 2.69
LMBR1-210ENST00000434503 UNC13BO14795 1591 aa31.85■■■□□ 2.69
LMBR1-210ENST00000434503 MSH6P52701 1360 aa31.85■■■□□ 2.69
LMBR1-210ENST00000434503 PPP1R15AO75807 674 aaPredicted RBP31.85■■■□□ 2.69
LMBR1-210ENST00000434503 CHD2O14647 1828 aaKnown RBP31.84■■■□□ 2.69
LMBR1-210ENST00000434503 SLAIN2Q9P270 581 aa31.8■■■□□ 2.68
LMBR1-210ENST00000434503 TBX22Q9Y458 520 aa31.8■■■□□ 2.68
LMBR1-210ENST00000434503 E9PCH4 1651 aa31.79■■■□□ 2.68
LMBR1-210ENST00000434503 CHGAP10645 457 aaKnown RBP31.78■■■□□ 2.68
LMBR1-210ENST00000434503 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.78■■■□□ 2.68
LMBR1-210ENST00000434503 ROCK1Q13464 1354 aa31.78■■■□□ 2.68
LMBR1-210ENST00000434503 PPARGC1BQ86YN6 1023 aaKnown RBP31.77■■■□□ 2.68
LMBR1-210ENST00000434503 IQGAP3Q86VI3 1631 aa31.74■■■□□ 2.67
LMBR1-210ENST00000434503 POTEAQ6S8J7 498 aa31.73■■■□□ 2.67
LMBR1-210ENST00000434503 NUTM2DQ5VT03 806 aaPredicted RBP31.71■■■□□ 2.67
LMBR1-210ENST00000434503 ADAMTS13Q76LX8 1427 aa31.71■■■□□ 2.67
LMBR1-210ENST00000434503 NCOA3Q9Y6Q9 1424 aa31.71■■■□□ 2.67
LMBR1-210ENST00000434503 PHLPP1O60346 1717 aa31.71■■■□□ 2.67
LMBR1-210ENST00000434503 NUP155O75694 1391 aa31.68■■■□□ 2.66
LMBR1-210ENST00000434503 DIP2AQ14689 1571 aa31.67■■■□□ 2.66
LMBR1-210ENST00000434503 PIK3R4Q99570 1358 aa31.66■■■□□ 2.66
LMBR1-210ENST00000434503 JCADQ9P266 1359 aa31.66■■■□□ 2.66
LMBR1-210ENST00000434503 C14orf37Q86TY3 774 aa31.65■■■□□ 2.66
LMBR1-210ENST00000434503 ITGAEP38570 1179 aa31.62■■■□□ 2.65
LMBR1-210ENST00000434503 C19orf44Q9H6X5 657 aa31.61■■■□□ 2.65
LMBR1-210ENST00000434503 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.61■■■□□ 2.65
LMBR1-210ENST00000434503 COL16A1Q07092 1604 aaPredicted RBP31.6■■■□□ 2.65
LMBR1-210ENST00000434503 CADPS2Q86UW7 1296 aa31.6■■■□□ 2.65
LMBR1-210ENST00000434503 TRPM2O94759 1503 aa31.58■■■□□ 2.65
LMBR1-210ENST00000434503 ATF3P18847 181 aa31.57■■■□□ 2.64
LMBR1-210ENST00000434503 AMOTL2Q9Y2J4 779 aa31.57■■■□□ 2.64
LMBR1-210ENST00000434503 PTPRUQ92729 1446 aa31.55■■■□□ 2.64
LMBR1-210ENST00000434503 AHDC1Q5TGY3 1603 aaPredicted RBP31.51■■■□□ 2.63
LMBR1-210ENST00000434503 SPATA31A6Q5VVP1 1343 aa31.5■■■□□ 2.63
LMBR1-210ENST00000434503 SPHKAPQ2M3C7 1700 aa31.5■■■□□ 2.63
LMBR1-210ENST00000434503 NRXN3Q9Y4C0 1643 aa31.49■■■□□ 2.63
LMBR1-210ENST00000434503 LRP6O75581 1613 aa31.47■■■□□ 2.63
LMBR1-210ENST00000434503 SETBP1Q9Y6X0 1596 aa31.47■■■□□ 2.63
LMBR1-210ENST00000434503 ZNF326Q5BKZ1 582 aaKnown RBP31.46■■■□□ 2.63
LMBR1-210ENST00000434503 BRINP3Q76B58 766 aa31.45■■■□□ 2.63
LMBR1-210ENST00000434503 XRN1Q8IZH2 1706 aaKnown RBP31.44■■■□□ 2.62
LMBR1-210ENST00000434503 SHPRHQ149N8 1683 aa31.44■■■□□ 2.62
LMBR1-210ENST00000434503 DCCP43146 1447 aa31.43■■■□□ 2.62
LMBR1-210ENST00000434503 SETD1AO15047 1707 aaKnown RBP31.42■■■□□ 2.62
LMBR1-210ENST00000434503 MEX3CQ5U5Q3 659 aaKnown RBP31.42■■■□□ 2.62
LMBR1-210ENST00000434503 METP08581 1390 aa31.4■■■□□ 2.62
LMBR1-210ENST00000434503 ZNF772Q68DY9 489 aaPredicted RBP31.38■■■□□ 2.61
LMBR1-210ENST00000434503 RRBP1Q9P2E9 1410 aaKnown RBP31.38■■■□□ 2.61
LMBR1-210ENST00000434503 CLTCL1P53675 1640 aa31.36■■■□□ 2.61
LMBR1-210ENST00000434503 ASXL1Q8IXJ9 1541 aa31.35■■■□□ 2.61
LMBR1-210ENST00000434503 MST1RQ04912 1400 aa31.35■■■□□ 2.61
LMBR1-210ENST00000434503 NEXMIFQ5QGS0 1516 aa31.34■■■□□ 2.61
LMBR1-210ENST00000434503 NUTM2BA6NNL0 878 aaPredicted RBP31.3■■■□□ 2.6
LMBR1-210ENST00000434503 NUTM2EB1AL46 878 aaPredicted RBP31.3■■■□□ 2.6
LMBR1-210ENST00000434503 NUTM2AQ8IVF1 878 aaPredicted RBP31.3■■■□□ 2.6
LMBR1-210ENST00000434503 SETD5Q9C0A6 1442 aa31.3■■■□□ 2.6
LMBR1-210ENST00000434503 KIF1BO60333 1816 aa31.29■■■□□ 2.6
LMBR1-210ENST00000434503 NHSL1Q5SYE7 1610 aa31.29■■■□□ 2.6
LMBR1-210ENST00000434503 NAIPQ13075 1403 aa31.29■■■□□ 2.6
LMBR1-210ENST00000434503 ADGRL3Q9HAR2 1447 aa31.29■■■□□ 2.6
LMBR1-210ENST00000434503 TRIM52Q96A61 297 aa31.26■■■□□ 2.59
LMBR1-210ENST00000434503 LRRC59Q96AG4 307 aaKnown RBP31.26■■■□□ 2.59
LMBR1-210ENST00000434503 NALCNQ8IZF0 1738 aa31.24■■■□□ 2.59
LMBR1-210ENST00000434503 RXRBP28702 533 aa31.23■■■□□ 2.59
LMBR1-210ENST00000434503 DDX17Q92841 729 aaKnown RBP31.21■■■□□ 2.59
LMBR1-210ENST00000434503 VGFO15240 615 aaPredicted RBP31.2■■■□□ 2.59
LMBR1-210ENST00000434503 UPF1Q92900 1129 aaKnown RBP eCLIP31.2■■■□□ 2.59
LMBR1-210ENST00000434503 AFF2P51816 1311 aa31.2■■■□□ 2.58
LMBR1-210ENST00000434503 PNPLA6Q8IY17 1366 aa31.17■■■□□ 2.58
LMBR1-210ENST00000434503 PTCH1Q13635 1447 aa31.15■■■□□ 2.58
LMBR1-210ENST00000434503 C1orf167Q5SNV9 1468 aa31.15■■■□□ 2.58
LMBR1-210ENST00000434503 CDK12Q9NYV4 1490 aaPredicted RBP31.14■■■□□ 2.58
LMBR1-210ENST00000434503 RPGRIP1LQ68CZ1 1315 aa31.14■■■□□ 2.58
LMBR1-210ENST00000434503 ROBO2Q9HCK4 1378 aa31.13■■■□□ 2.57
LMBR1-210ENST00000434503 HFM1A2PYH4 1435 aa31.13■■■□□ 2.57
LMBR1-210ENST00000434503 C8orf37Q96NL8 207 aa31.11■■■□□ 2.57
LMBR1-210ENST00000434503 SLC4A1APQ9BWU0 796 aaKnown RBP31.11■■■□□ 2.57
LMBR1-210ENST00000434503 LAMC1P11047 1609 aa31.09■■■□□ 2.57
LMBR1-210ENST00000434503 PRAG1Q86YV5 1406 aa31.08■■■□□ 2.57
LMBR1-210ENST00000434503 ORAI2Q96SN7 254 aa31.08■■■□□ 2.57
LMBR1-210ENST00000434503 QTRT2Q9H974 415 aaKnown RBP31.07■■■□□ 2.56
LMBR1-210ENST00000434503 PPLO60437 1756 aa31.07■■■□□ 2.56
LMBR1-210ENST00000434503 SOS2Q07890 1332 aaPredicted RBP31.05■■■□□ 2.56
LMBR1-210ENST00000434503 RBM6P78332 1123 aaKnown RBP31.03■■■□□ 2.56
LMBR1-210ENST00000434503 ADAMTS2O95450 1211 aa31.02■■■□□ 2.56
LMBR1-210ENST00000434503 NGLY1Q96IV0 654 aa31.02■■■□□ 2.56
LMBR1-210ENST00000434503 RGS12O14924 1447 aa30.98■■■□□ 2.55
LMBR1-210ENST00000434503 FOXD1Q16676 465 aa30.98■■■□□ 2.55
LMBR1-210ENST00000434503 ADGRF5Q8IZF2 1346 aa30.93■■■□□ 2.54
LMBR1-210ENST00000434503 CDC42BPGQ6DT37 1551 aa30.92■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms