RNA–Protein interactions for RNA: ENST00000434361.5

TNRC18-206, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 3

Gene TNRC18, Length 577 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-206ENST00000434361 RAB3GAP2Q9H2M9 1393 aa24.16■■□□□ 1.46
TNRC18-206ENST00000434361 PIP4K2BP78356 416 aa24.15■■□□□ 1.46
TNRC18-206ENST00000434361 TRIM52Q96A61 297 aa24.15■■□□□ 1.46
TNRC18-206ENST00000434361 HSPA1LP34931 641 aa24.13■■□□□ 1.45
TNRC18-206ENST00000434361 TOM1O60784 492 aa24.12■■□□□ 1.45
TNRC18-206ENST00000434361 STAG3Q9UJ98 1225 aa24.12■■□□□ 1.45
TNRC18-206ENST00000434361 ALKQ9UM73 1620 aa24.11■■□□□ 1.45
TNRC18-206ENST00000434361 SLC4A1APQ9BWU0 796 aaKnown RBP24.11■■□□□ 1.45
TNRC18-206ENST00000434361 ACIN1Q9UKV3 1341 aaKnown RBP24.1■■□□□ 1.45
TNRC18-206ENST00000434361 TXNDC2Q86VQ3 553 aa24.1■■□□□ 1.45
TNRC18-206ENST00000434361 RIMS2Q9UQ26 1411 aa24.1■■□□□ 1.45
TNRC18-206ENST00000434361 MED1Q15648 1581 aaPredicted RBP24.09■■□□□ 1.45
TNRC18-206ENST00000434361 EID1Q9Y6B2 187 aa24.07■■□□□ 1.44
TNRC18-206ENST00000434361 NEXMIFQ5QGS0 1516 aa24.06■■□□□ 1.44
TNRC18-206ENST00000434361 MPHOSPH9Q99550 1183 aa24.06■■□□□ 1.44
TNRC18-206ENST00000434361 NRXN3Q9Y4C0 1643 aa24.05■■□□□ 1.44
TNRC18-206ENST00000434361 LRRC7Q96NW7 1537 aa24.05■■□□□ 1.44
TNRC18-206ENST00000434361 PPLO60437 1756 aa24.04■■□□□ 1.44
TNRC18-206ENST00000434361 PLEKHG1Q9ULL1 1385 aa24.03■■□□□ 1.44
TNRC18-206ENST00000434361 XIRP1Q702N8 1843 aaKnown RBP24.03■■□□□ 1.44
TNRC18-206ENST00000434361 IFT172Q9UG01 1749 aa24.02■■□□□ 1.44
TNRC18-206ENST00000434361 HRCP23327 699 aa24.02■■□□□ 1.44
TNRC18-206ENST00000434361 CHD2O14647 1828 aaKnown RBP24.02■■□□□ 1.44
TNRC18-206ENST00000434361 NWD1Q149M9 1564 aa24.02■■□□□ 1.44
TNRC18-206ENST00000434361 DIP2AQ14689 1571 aa24.01■■□□□ 1.43
TNRC18-206ENST00000434361 FOXD1Q16676 465 aa24.01■■□□□ 1.43
TNRC18-206ENST00000434361 SETBP1Q9Y6X0 1596 aa23.99■■□□□ 1.43
TNRC18-206ENST00000434361 CHGAP10645 457 aaKnown RBP23.98■■□□□ 1.43
TNRC18-206ENST00000434361 ADAMTS13Q76LX8 1427 aa23.96■■□□□ 1.43
TNRC18-206ENST00000434361 SETD1AO15047 1707 aaKnown RBP23.96■■□□□ 1.43
TNRC18-206ENST00000434361 CCDC144AA2RUR9 1427 aa23.95■■□□□ 1.42
TNRC18-206ENST00000434361 SPATA31E1Q6ZUB1 1445 aa23.95■■□□□ 1.42
TNRC18-206ENST00000434361 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.95■■□□□ 1.42
TNRC18-206ENST00000434361 HDGFP51858 240 aaKnown RBP23.93■■□□□ 1.42
TNRC18-206ENST00000434361 SENP3Q9H4L4 574 aaPredicted RBP23.92■■□□□ 1.42
TNRC18-206ENST00000434361 PPP1R15AO75807 674 aaPredicted RBP23.9■■□□□ 1.42
TNRC18-206ENST00000434361 SLC26A8Q96RN1 970 aa23.9■■□□□ 1.42
TNRC18-206ENST00000434361 NKTRP30414 1462 aaKnown RBP23.89■■□□□ 1.42
TNRC18-206ENST00000434361 NUTM2DQ5VT03 806 aaPredicted RBP23.89■■□□□ 1.41
TNRC18-206ENST00000434361 XRN1Q8IZH2 1706 aaKnown RBP23.88■■□□□ 1.41
TNRC18-206ENST00000434361 ANKRD30BQ9BXX2 1392 aa23.88■■□□□ 1.41
TNRC18-206ENST00000434361 ZNF326Q5BKZ1 582 aaKnown RBP23.86■■□□□ 1.41
TNRC18-206ENST00000434361 PHF23Q9BUL5 403 aaPredicted RBP23.85■■□□□ 1.41
TNRC18-206ENST00000434361 TBX22Q9Y458 520 aa23.85■■□□□ 1.41
TNRC18-206ENST00000434361 PIK3R4Q99570 1358 aa23.84■■□□□ 1.41
TNRC18-206ENST00000434361 RPGRIP1LQ68CZ1 1315 aa23.84■■□□□ 1.41
TNRC18-206ENST00000434361 KCNA6P17658 529 aa23.83■■□□□ 1.41
TNRC18-206ENST00000434361 PTPRUQ92729 1446 aa23.81■■□□□ 1.4
TNRC18-206ENST00000434361 BCANQ96GW7 911 aa23.78■■□□□ 1.4
TNRC18-206ENST00000434361 MYOM2P54296 1465 aa23.76■■□□□ 1.39
TNRC18-206ENST00000434361 NRXN1Q9ULB1 1477 aa23.76■■□□□ 1.39
TNRC18-206ENST00000434361 VGFO15240 615 aaPredicted RBP23.76■■□□□ 1.39
TNRC18-206ENST00000434361 METP08581 1390 aa23.76■■□□□ 1.39
TNRC18-206ENST00000434361 TMEM94Q12767 1356 aa23.76■■□□□ 1.39
TNRC18-206ENST00000434361 TRIM26Q12899 539 aaPredicted RBP23.74■■□□□ 1.39
TNRC18-206ENST00000434361 PIK3C2GO75747 1445 aa23.74■■□□□ 1.39
TNRC18-206ENST00000434361 PRAG1Q86YV5 1406 aa23.74■■□□□ 1.39
TNRC18-206ENST00000434361 LAMC1P11047 1609 aa23.73■■□□□ 1.39
TNRC18-206ENST00000434361 FAM135BQ49AJ0 1406 aa23.72■■□□□ 1.39
TNRC18-206ENST00000434361 ASXL1Q8IXJ9 1541 aa23.72■■□□□ 1.39
TNRC18-206ENST00000434361 ROBO1Q9Y6N7 1651 aa23.71■■□□□ 1.39
TNRC18-206ENST00000434361 ADGRF5Q8IZF2 1346 aa23.71■■□□□ 1.39
TNRC18-206ENST00000434361 RGL3Q3MIN7 710 aa23.71■■□□□ 1.39
TNRC18-206ENST00000434361 NCOA3Q9Y6Q9 1424 aa23.7■■□□□ 1.38
TNRC18-206ENST00000434361 KNDC1Q76NI1 1749 aa23.7■■□□□ 1.38
TNRC18-206ENST00000434361 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.7■■□□□ 1.38
TNRC18-206ENST00000434361 RBM33Q96EV2 1170 aaKnown RBP23.69■■□□□ 1.38
TNRC18-206ENST00000434361 NALCNQ8IZF0 1738 aa23.68■■□□□ 1.38
TNRC18-206ENST00000434361 PROSER2Q86WR7 435 aaPredicted RBP23.68■■□□□ 1.38
TNRC18-206ENST00000434361 RGS17Q9UGC6 210 aaPredicted RBP23.67■■□□□ 1.38
TNRC18-206ENST00000434361 AMOTL2Q9Y2J4 779 aa23.66■■□□□ 1.38
TNRC18-206ENST00000434361 PTCH1Q13635 1447 aa23.66■■□□□ 1.38
TNRC18-206ENST00000434361 DHX57Q6P158 1386 aaKnown RBP23.63■■□□□ 1.37
TNRC18-206ENST00000434361 TECPR2O15040 1411 aa23.59■■□□□ 1.37
TNRC18-206ENST00000434361 MSH6P52701 1360 aa23.59■■□□□ 1.37
TNRC18-206ENST00000434361 ADGRB1O14514 1584 aa23.58■■□□□ 1.37
TNRC18-206ENST00000434361 PHLPP1O60346 1717 aa23.58■■□□□ 1.37
TNRC18-206ENST00000434361 DCCP43146 1447 aa23.58■■□□□ 1.36
TNRC18-206ENST00000434361 ROBO2Q9HCK4 1378 aa23.57■■□□□ 1.36
TNRC18-206ENST00000434361 KIAA1210Q9ULL0 1709 aa23.56■■□□□ 1.36
TNRC18-206ENST00000434361 ADGRL3Q9HAR2 1447 aa23.56■■□□□ 1.36
TNRC18-206ENST00000434361 C14orf93Q9H972 538 aaKnown RBP23.54■■□□□ 1.36
TNRC18-206ENST00000434361 LRPPRCP42704 1394 aaKnown RBP23.53■■□□□ 1.36
TNRC18-206ENST00000434361 SLAIN2Q9P270 581 aa23.53■■□□□ 1.36
TNRC18-206ENST00000434361 YTHDC2Q9H6S0 1430 aaKnown RBP23.52■■□□□ 1.36
TNRC18-206ENST00000434361 POTEAQ6S8J7 498 aa23.52■■□□□ 1.36
TNRC18-206ENST00000434361 STAC3Q96MF2 364 aa23.52■■□□□ 1.36
TNRC18-206ENST00000434361 C19orf44Q9H6X5 657 aa23.51■■□□□ 1.35
TNRC18-206ENST00000434361 ABCC11Q96J66 1382 aa23.51■■□□□ 1.35
TNRC18-206ENST00000434361 DCAF11Q8TEB1 546 aa23.5■■□□□ 1.35
TNRC18-206ENST00000434361 CDC42BPGQ6DT37 1551 aa23.49■■□□□ 1.35
TNRC18-206ENST00000434361 COL16A1Q07092 1604 aaPredicted RBP23.49■■□□□ 1.35
TNRC18-206ENST00000434361 CFAP70Q5T0N1 1121 aa23.49■■□□□ 1.35
TNRC18-206ENST00000434361 DLC1Q96QB1 1528 aa23.49■■□□□ 1.35
TNRC18-206ENST00000434361 TMEM132EQ6IEE7 984 aa23.47■■□□□ 1.35
TNRC18-206ENST00000434361 MST1RQ04912 1400 aa23.47■■□□□ 1.35
TNRC18-206ENST00000434361 ARHGEF28Q8N1W1 1705 aaKnown RBP23.47■■□□□ 1.35
TNRC18-206ENST00000434361 JCADQ9P266 1359 aa23.46■■□□□ 1.35
TNRC18-206ENST00000434361 C14orf37Q86TY3 774 aa23.45■■□□□ 1.34
TNRC18-206ENST00000434361 CADPS2Q86UW7 1296 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms