RNA–Protein interactions for RNA: ENST00000433535.6

RPUSD3-206, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-206ENST00000433535 SENP3Q9H4L4 574 aaPredicted RBP33.38■■■□□ 2.93
RPUSD3-206ENST00000433535 MED1Q15648 1581 aaPredicted RBP33.38■■■□□ 2.93
RPUSD3-206ENST00000433535 NUP155O75694 1391 aa33.37■■■□□ 2.93
RPUSD3-206ENST00000433535 RIMS2Q9UQ26 1411 aa33.36■■■□□ 2.93
RPUSD3-206ENST00000433535 NWD1Q149M9 1564 aa33.35■■■□□ 2.93
RPUSD3-206ENST00000433535 BCANQ96GW7 911 aa33.34■■■□□ 2.93
RPUSD3-206ENST00000433535 TMEM94Q12767 1356 aa33.33■■■□□ 2.93
RPUSD3-206ENST00000433535 KCNA6P17658 529 aa33.32■■■□□ 2.92
RPUSD3-206ENST00000433535 CHGAP10645 457 aaKnown RBP33.31■■■□□ 2.92
RPUSD3-206ENST00000433535 PLEKHG1Q9ULL1 1385 aa33.31■■■□□ 2.92
RPUSD3-206ENST00000433535 PPP1R15AO75807 674 aaPredicted RBP33.3■■■□□ 2.92
RPUSD3-206ENST00000433535 NKTRP30414 1462 aaKnown RBP33.3■■■□□ 2.92
RPUSD3-206ENST00000433535 RRBP1Q9P2E9 1410 aaKnown RBP33.29■■■□□ 2.92
RPUSD3-206ENST00000433535 RBM33Q96EV2 1170 aaKnown RBP33.27■■■□□ 2.92
RPUSD3-206ENST00000433535 SOCS7O14512 581 aa33.26■■■□□ 2.91
RPUSD3-206ENST00000433535 PROSER2Q86WR7 435 aaPredicted RBP33.25■■■□□ 2.91
RPUSD3-206ENST00000433535 SPHKAPQ2M3C7 1700 aa33.23■■■□□ 2.91
RPUSD3-206ENST00000433535 CHD2O14647 1828 aaKnown RBP33.23■■■□□ 2.91
RPUSD3-206ENST00000433535 NUTM2DQ5VT03 806 aaPredicted RBP33.22■■■□□ 2.91
RPUSD3-206ENST00000433535 HDGFP51858 240 aaKnown RBP33.21■■■□□ 2.91
RPUSD3-206ENST00000433535 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.18■■■□□ 2.9
RPUSD3-206ENST00000433535 ADAMTS13Q76LX8 1427 aa33.17■■■□□ 2.9
RPUSD3-206ENST00000433535 NAIPQ13075 1403 aa33.15■■■□□ 2.9
RPUSD3-206ENST00000433535 DIP2AQ14689 1571 aa33.15■■■□□ 2.9
RPUSD3-206ENST00000433535 ROBO1Q9Y6N7 1651 aa33.15■■■□□ 2.9
RPUSD3-206ENST00000433535 FAM135BQ49AJ0 1406 aa33.14■■■□□ 2.9
RPUSD3-206ENST00000433535 TBX22Q9Y458 520 aa33.12■■■□□ 2.89
RPUSD3-206ENST00000433535 MSH6P52701 1360 aa33.11■■■□□ 2.89
RPUSD3-206ENST00000433535 CLTCL1P53675 1640 aa33.08■■■□□ 2.89
RPUSD3-206ENST00000433535 PHF23Q9BUL5 403 aaPredicted RBP33.07■■■□□ 2.88
RPUSD3-206ENST00000433535 TRPM2O94759 1503 aa33.06■■■□□ 2.88
RPUSD3-206ENST00000433535 NRXN3Q9Y4C0 1643 aa33.05■■■□□ 2.88
RPUSD3-206ENST00000433535 HFM1A2PYH4 1435 aa33.02■■■□□ 2.88
RPUSD3-206ENST00000433535 PIK3R4Q99570 1358 aa33.02■■■□□ 2.88
RPUSD3-206ENST00000433535 SETBP1Q9Y6X0 1596 aa33■■■□□ 2.87
RPUSD3-206ENST00000433535 ZNF326Q5BKZ1 582 aaKnown RBP33■■■□□ 2.87
RPUSD3-206ENST00000433535 PTPRUQ92729 1446 aa32.99■■■□□ 2.87
RPUSD3-206ENST00000433535 C14orf37Q86TY3 774 aa32.97■■■□□ 2.87
RPUSD3-206ENST00000433535 NEXMIFQ5QGS0 1516 aa32.97■■■□□ 2.87
RPUSD3-206ENST00000433535 NCOA3Q9Y6Q9 1424 aa32.96■■■□□ 2.87
RPUSD3-206ENST00000433535 SLAIN2Q9P270 581 aa32.96■■■□□ 2.87
RPUSD3-206ENST00000433535 KIF1BO60333 1816 aa32.95■■■□□ 2.87
RPUSD3-206ENST00000433535 XRN1Q8IZH2 1706 aaKnown RBP32.95■■■□□ 2.87
RPUSD3-206ENST00000433535 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.95■■■□□ 2.87
RPUSD3-206ENST00000433535 PHLPP1O60346 1717 aa32.94■■■□□ 2.86
RPUSD3-206ENST00000433535 TRIM52Q96A61 297 aa32.94■■■□□ 2.86
RPUSD3-206ENST00000433535 AMOTL2Q9Y2J4 779 aa32.93■■■□□ 2.86
RPUSD3-206ENST00000433535 METP08581 1390 aa32.87■■■□□ 2.85
RPUSD3-206ENST00000433535 COL16A1Q07092 1604 aaPredicted RBP32.85■■■□□ 2.85
RPUSD3-206ENST00000433535 C19orf44Q9H6X5 657 aa32.85■■■□□ 2.85
RPUSD3-206ENST00000433535 SLC4A1APQ9BWU0 796 aaKnown RBP32.84■■■□□ 2.85
RPUSD3-206ENST00000433535 CADPS2Q86UW7 1296 aa32.83■■■□□ 2.85
RPUSD3-206ENST00000433535 RGS17Q9UGC6 210 aaPredicted RBP32.83■■■□□ 2.85
RPUSD3-206ENST00000433535 ATF3P18847 181 aa32.82■■■□□ 2.84
RPUSD3-206ENST00000433535 AHDC1Q5TGY3 1603 aaPredicted RBP32.77■■■□□ 2.84
RPUSD3-206ENST00000433535 JCADQ9P266 1359 aa32.77■■■□□ 2.84
RPUSD3-206ENST00000433535 SETD1AO15047 1707 aaKnown RBP32.77■■■□□ 2.84
RPUSD3-206ENST00000433535 DCCP43146 1447 aa32.77■■■□□ 2.84
RPUSD3-206ENST00000433535 FOXD1Q16676 465 aa32.75■■■□□ 2.83
RPUSD3-206ENST00000433535 PPLO60437 1756 aa32.74■■■□□ 2.83
RPUSD3-206ENST00000433535 NALCNQ8IZF0 1738 aa32.74■■■□□ 2.83
RPUSD3-206ENST00000433535 ADGRL3Q9HAR2 1447 aa32.7■■■□□ 2.83
RPUSD3-206ENST00000433535 MST1RQ04912 1400 aa32.69■■■□□ 2.82
RPUSD3-206ENST00000433535 ASXL1Q8IXJ9 1541 aa32.69■■■□□ 2.82
RPUSD3-206ENST00000433535 BRINP3Q76B58 766 aa32.69■■■□□ 2.82
RPUSD3-206ENST00000433535 VGFO15240 615 aaPredicted RBP32.68■■■□□ 2.82
RPUSD3-206ENST00000433535 RPGRIP1LQ68CZ1 1315 aa32.66■■■□□ 2.82
RPUSD3-206ENST00000433535 LRP6O75581 1613 aa32.66■■■□□ 2.82
RPUSD3-206ENST00000433535 SHPRHQ149N8 1683 aa32.66■■■□□ 2.82
RPUSD3-206ENST00000433535 POTEAQ6S8J7 498 aa32.65■■■□□ 2.82
RPUSD3-206ENST00000433535 PTCH1Q13635 1447 aa32.64■■■□□ 2.82
RPUSD3-206ENST00000433535 CCDC144AA2RUR9 1427 aa32.63■■■□□ 2.81
RPUSD3-206ENST00000433535 NHSL1Q5SYE7 1610 aa32.62■■■□□ 2.81
RPUSD3-206ENST00000433535 ROBO2Q9HCK4 1378 aa32.61■■■□□ 2.81
RPUSD3-206ENST00000433535 SPATA31A6Q5VVP1 1343 aa32.59■■■□□ 2.81
RPUSD3-206ENST00000433535 MPHOSPH9Q99550 1183 aa32.59■■■□□ 2.81
RPUSD3-206ENST00000433535 SPATA31E1Q6ZUB1 1445 aa32.57■■■□□ 2.8
RPUSD3-206ENST00000433535 IFT172Q9UG01 1749 aa32.57■■■□□ 2.8
RPUSD3-206ENST00000433535 PRAG1Q86YV5 1406 aa32.56■■■□□ 2.8
RPUSD3-206ENST00000433535 RGL3Q3MIN7 710 aa32.53■■■□□ 2.8
RPUSD3-206ENST00000433535 ADGRF5Q8IZF2 1346 aa32.52■■■□□ 2.8
RPUSD3-206ENST00000433535 MEX3CQ5U5Q3 659 aaKnown RBP32.51■■■□□ 2.79
RPUSD3-206ENST00000433535 DDX17Q92841 729 aaKnown RBP32.51■■■□□ 2.79
RPUSD3-206ENST00000433535 SETD5Q9C0A6 1442 aa32.51■■■□□ 2.79
RPUSD3-206ENST00000433535 C1orf167Q5SNV9 1468 aa32.5■■■□□ 2.79
RPUSD3-206ENST00000433535 NUTM2BA6NNL0 878 aaPredicted RBP32.46■■■□□ 2.79
RPUSD3-206ENST00000433535 NUTM2EB1AL46 878 aaPredicted RBP32.46■■■□□ 2.79
RPUSD3-206ENST00000433535 NUTM2AQ8IVF1 878 aaPredicted RBP32.46■■■□□ 2.79
RPUSD3-206ENST00000433535 ANKRD30BQ9BXX2 1392 aa32.45■■■□□ 2.79
RPUSD3-206ENST00000433535 LAMC1P11047 1609 aa32.42■■■□□ 2.78
RPUSD3-206ENST00000433535 PIK3C2GO75747 1445 aa32.42■■■□□ 2.78
RPUSD3-206ENST00000433535 RAB3GAP2Q9H2M9 1393 aa32.41■■■□□ 2.78
RPUSD3-206ENST00000433535 CDC42BPGQ6DT37 1551 aa32.41■■■□□ 2.78
RPUSD3-206ENST00000433535 LRRC59Q96AG4 307 aaKnown RBP32.4■■■□□ 2.78
RPUSD3-206ENST00000433535 PNPLA6Q8IY17 1366 aa32.4■■■□□ 2.78
RPUSD3-206ENST00000433535 ORAI2Q96SN7 254 aa32.39■■■□□ 2.78
RPUSD3-206ENST00000433535 KNDC1Q76NI1 1749 aa32.38■■■□□ 2.77
RPUSD3-206ENST00000433535 STK26Q9P289 416 aa32.38■■■□□ 2.77
RPUSD3-206ENST00000433535 TECPR2O15040 1411 aa32.37■■■□□ 2.77
RPUSD3-206ENST00000433535 ZNF772Q68DY9 489 aaPredicted RBP32.37■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms