RNA–Protein interactions for RNA: ENST00000433496.5

RFC4-207, Transcript of replication factor C subunit 4, humanhuman

TSL 5 BASIC

Gene RFC4, Length 1,111 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-207ENST00000433496 PPP1R15AO75807 674 aaPredicted RBP14.61□□□□□ -0.07
RFC4-207ENST00000433496 CHGAP10645 457 aaKnown RBP14.61□□□□□ -0.07
RFC4-207ENST00000433496 HDGFP51858 240 aaKnown RBP14.61□□□□□ -0.07
RFC4-207ENST00000433496 DISP3Q9P2K9 1392 aa14.6□□□□□ -0.07
RFC4-207ENST00000433496 XIRP1Q702N8 1843 aaKnown RBP14.6□□□□□ -0.07
RFC4-207ENST00000433496 RIMS2Q9UQ26 1411 aa14.58□□□□□ -0.07
RFC4-207ENST00000433496 ZFYVE9O95405 1425 aa14.57□□□□□ -0.08
RFC4-207ENST00000433496 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.56□□□□□ -0.08
RFC4-207ENST00000433496 SLC26A8Q96RN1 970 aa14.56□□□□□ -0.08
RFC4-207ENST00000433496 PLEKHG1Q9ULL1 1385 aa14.56□□□□□ -0.08
RFC4-207ENST00000433496 NKTRP30414 1462 aaKnown RBP14.56□□□□□ -0.08
RFC4-207ENST00000433496 NWD1Q149M9 1564 aa14.56□□□□□ -0.08
RFC4-207ENST00000433496 CHD2O14647 1828 aaKnown RBP14.55□□□□□ -0.08
RFC4-207ENST00000433496 KIF1BO60333 1816 aa14.55□□□□□ -0.08
RFC4-207ENST00000433496 KCNA6P17658 529 aa14.54□□□□□ -0.08
RFC4-207ENST00000433496 NAIPQ13075 1403 aa14.54□□□□□ -0.08
RFC4-207ENST00000433496 DIP2AQ14689 1571 aa14.54□□□□□ -0.08
RFC4-207ENST00000433496 ALKQ9UM73 1620 aa14.54□□□□□ -0.08
RFC4-207ENST00000433496 HFM1A2PYH4 1435 aa14.53□□□□□ -0.08
RFC4-207ENST00000433496 HSPA1LP34931 641 aa14.53□□□□□ -0.08
RFC4-207ENST00000433496 TMEM94Q12767 1356 aa14.51□□□□□ -0.09
RFC4-207ENST00000433496 PROSER2Q86WR7 435 aaPredicted RBP14.51□□□□□ -0.09
RFC4-207ENST00000433496 TRIM52Q96A61 297 aa14.51□□□□□ -0.09
RFC4-207ENST00000433496 TRPM2O94759 1503 aa14.51□□□□□ -0.09
RFC4-207ENST00000433496 CLTCL1P53675 1640 aa14.5□□□□□ -0.09
RFC4-207ENST00000433496 ZNF326Q5BKZ1 582 aaKnown RBP14.49□□□□□ -0.09
RFC4-207ENST00000433496 NUTM2DQ5VT03 806 aaPredicted RBP14.49□□□□□ -0.09
RFC4-207ENST00000433496 MED1Q15648 1581 aaPredicted RBP14.48□□□□□ -0.09
RFC4-207ENST00000433496 MSH6P52701 1360 aa14.47□□□□□ -0.09
RFC4-207ENST00000433496 ROBO1Q9Y6N7 1651 aa14.46□□□□□ -0.09
RFC4-207ENST00000433496 TBX22Q9Y458 520 aa14.46□□□□□ -0.09
RFC4-207ENST00000433496 ADAMTS13Q76LX8 1427 aa14.45□□□□□ -0.1
RFC4-207ENST00000433496 C14orf37Q86TY3 774 aa14.45□□□□□ -0.1
RFC4-207ENST00000433496 PIK3R4Q99570 1358 aa14.45□□□□□ -0.1
RFC4-207ENST00000433496 SETBP1Q9Y6X0 1596 aa14.44□□□□□ -0.1
RFC4-207ENST00000433496 RBM33Q96EV2 1170 aaKnown RBP14.44□□□□□ -0.1
RFC4-207ENST00000433496 SLC4A1APQ9BWU0 796 aaKnown RBP14.44□□□□□ -0.1
RFC4-207ENST00000433496 NRXN3Q9Y4C0 1643 aa14.43□□□□□ -0.1
RFC4-207ENST00000433496 NEXMIFQ5QGS0 1516 aa14.42□□□□□ -0.1
RFC4-207ENST00000433496 FAM135BQ49AJ0 1406 aa14.41□□□□□ -0.1
RFC4-207ENST00000433496 PHLPP1O60346 1717 aa14.41□□□□□ -0.1
RFC4-207ENST00000433496 XRN1Q8IZH2 1706 aaKnown RBP14.41□□□□□ -0.1
RFC4-207ENST00000433496 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.41□□□□□ -0.1
RFC4-207ENST00000433496 NCOA3Q9Y6Q9 1424 aa14.41□□□□□ -0.1
RFC4-207ENST00000433496 PPLO60437 1756 aa14.39□□□□□ -0.11
RFC4-207ENST00000433496 ILDR2Q71H61 639 aa14.39□□□□□ -0.11
RFC4-207ENST00000433496 ADRA2BP18089 450 aa14.38□□□□□ -0.11
RFC4-207ENST00000433496 ACIN1Q9UKV3 1341 aaKnown RBP14.38□□□□□ -0.11
RFC4-207ENST00000433496 ATF3P18847 181 aa14.37□□□□□ -0.11
RFC4-207ENST00000433496 SLAIN2Q9P270 581 aa14.37□□□□□ -0.11
RFC4-207ENST00000433496 AMOTL2Q9Y2J4 779 aa14.37□□□□□ -0.11
RFC4-207ENST00000433496 CCDC144AA2RUR9 1427 aa14.36□□□□□ -0.11
RFC4-207ENST00000433496 PTPRUQ92729 1446 aa14.35□□□□□ -0.11
RFC4-207ENST00000433496 VGFO15240 615 aaPredicted RBP14.35□□□□□ -0.11
RFC4-207ENST00000433496 CADPS2Q86UW7 1296 aa14.35□□□□□ -0.11
RFC4-207ENST00000433496 SOCS7O14512 581 aa14.34□□□□□ -0.11
RFC4-207ENST00000433496 C19orf44Q9H6X5 657 aa14.34□□□□□ -0.11
RFC4-207ENST00000433496 RPGRIP1LQ68CZ1 1315 aa14.34□□□□□ -0.11
RFC4-207ENST00000433496 DCCP43146 1447 aa14.33□□□□□ -0.11
RFC4-207ENST00000433496 SETD1AO15047 1707 aaKnown RBP14.33□□□□□ -0.12
RFC4-207ENST00000433496 METP08581 1390 aa14.33□□□□□ -0.12
RFC4-207ENST00000433496 SETD5Q9C0A6 1442 aa14.32□□□□□ -0.12
RFC4-207ENST00000433496 NALCNQ8IZF0 1738 aa14.32□□□□□ -0.12
RFC4-207ENST00000433496 IFT172Q9UG01 1749 aa14.32□□□□□ -0.12
RFC4-207ENST00000433496 MPHOSPH9Q99550 1183 aa14.32□□□□□ -0.12
RFC4-207ENST00000433496 COL16A1Q07092 1604 aaPredicted RBP14.3□□□□□ -0.12
RFC4-207ENST00000433496 AHDC1Q5TGY3 1603 aaPredicted RBP14.3□□□□□ -0.12
RFC4-207ENST00000433496 ADGRL3Q9HAR2 1447 aa14.29□□□□□ -0.12
RFC4-207ENST00000433496 PTCH1Q13635 1447 aa14.28□□□□□ -0.12
RFC4-207ENST00000433496 JCADQ9P266 1359 aa14.28□□□□□ -0.12
RFC4-207ENST00000433496 SHPRHQ149N8 1683 aa14.26□□□□□ -0.13
RFC4-207ENST00000433496 ASXL1Q8IXJ9 1541 aa14.26□□□□□ -0.13
RFC4-207ENST00000433496 ANKRD30BQ9BXX2 1392 aa14.26□□□□□ -0.13
RFC4-207ENST00000433496 RAB3GAP2Q9H2M9 1393 aa14.26□□□□□ -0.13
RFC4-207ENST00000433496 RGL3Q3MIN7 710 aa14.26□□□□□ -0.13
RFC4-207ENST00000433496 SPATA31E1Q6ZUB1 1445 aa14.25□□□□□ -0.13
RFC4-207ENST00000433496 NHSL1Q5SYE7 1610 aa14.25□□□□□ -0.13
RFC4-207ENST00000433496 MST1RQ04912 1400 aa14.24□□□□□ -0.13
RFC4-207ENST00000433496 LAMC1P11047 1609 aa14.24□□□□□ -0.13
RFC4-207ENST00000433496 BRINP3Q76B58 766 aa14.23□□□□□ -0.13
RFC4-207ENST00000433496 KNDC1Q76NI1 1749 aa14.23□□□□□ -0.13
RFC4-207ENST00000433496 PRAG1Q86YV5 1406 aa14.23□□□□□ -0.13
RFC4-207ENST00000433496 ROBO2Q9HCK4 1378 aa14.22□□□□□ -0.13
RFC4-207ENST00000433496 SPATA31A6Q5VVP1 1343 aa14.21□□□□□ -0.13
RFC4-207ENST00000433496 ADGRF5Q8IZF2 1346 aa14.21□□□□□ -0.13
RFC4-207ENST00000433496 MEX3CQ5U5Q3 659 aaKnown RBP14.21□□□□□ -0.13
RFC4-207ENST00000433496 PIK3C2GO75747 1445 aa14.2□□□□□ -0.14
RFC4-207ENST00000433496 CDC42BPGQ6DT37 1551 aa14.2□□□□□ -0.14
RFC4-207ENST00000433496 MYOM2P54296 1465 aa14.18□□□□□ -0.14
RFC4-207ENST00000433496 STK26Q9P289 416 aa14.18□□□□□ -0.14
RFC4-207ENST00000433496 C1orf167Q5SNV9 1468 aa14.18□□□□□ -0.14
RFC4-207ENST00000433496 PIAS4Q8N2W9 510 aaPredicted RBP14.17□□□□□ -0.14
RFC4-207ENST00000433496 LRPPRCP42704 1394 aaKnown RBP14.17□□□□□ -0.14
RFC4-207ENST00000433496 TECPR2O15040 1411 aa14.15□□□□□ -0.14
RFC4-207ENST00000433496 LRP6O75581 1613 aa14.15□□□□□ -0.14
RFC4-207ENST00000433496 LRRC59Q96AG4 307 aaKnown RBP14.15□□□□□ -0.14
RFC4-207ENST00000433496 RGS17Q9UGC6 210 aaPredicted RBP14.15□□□□□ -0.14
RFC4-207ENST00000433496 YTHDC2Q9H6S0 1430 aaKnown RBP14.15□□□□□ -0.14
RFC4-207ENST00000433496 NUTM2BA6NNL0 878 aaPredicted RBP14.14□□□□□ -0.15
RFC4-207ENST00000433496 NUTM2EB1AL46 878 aaPredicted RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms