RNA–Protein interactions for RNA: ENST00000433028.6

CHEK2-213, Transcript of checkpoint kinase 2, humanhuman

TSL 5

Gene CHEK2, Length 1,349 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-213ENST00000433028 KCNA6P17658 529 aa20.41■□□□□ 0.86
CHEK2-213ENST00000433028 NWD1Q149M9 1564 aa20.41■□□□□ 0.86
CHEK2-213ENST00000433028 MED1Q15648 1581 aaPredicted RBP20.4■□□□□ 0.86
CHEK2-213ENST00000433028 PPARGC1BQ86YN6 1023 aaKnown RBP20.4■□□□□ 0.86
CHEK2-213ENST00000433028 SLC26A8Q96RN1 970 aa20.4■□□□□ 0.86
CHEK2-213ENST00000433028 CHD2O14647 1828 aaKnown RBP20.38■□□□□ 0.85
CHEK2-213ENST00000433028 SOCS7O14512 581 aa20.38■□□□□ 0.85
CHEK2-213ENST00000433028 ITGAEP38570 1179 aa20.38■□□□□ 0.85
CHEK2-213ENST00000433028 NUP155O75694 1391 aa20.38■□□□□ 0.85
CHEK2-213ENST00000433028 PLEKHG1Q9ULL1 1385 aa20.38■□□□□ 0.85
CHEK2-213ENST00000433028 RIMS2Q9UQ26 1411 aa20.38■□□□□ 0.85
CHEK2-213ENST00000433028 NKTRP30414 1462 aaKnown RBP20.38■□□□□ 0.85
CHEK2-213ENST00000433028 RRBP1Q9P2E9 1410 aaKnown RBP20.36■□□□□ 0.85
CHEK2-213ENST00000433028 TMEM94Q12767 1356 aa20.36■□□□□ 0.85
CHEK2-213ENST00000433028 HDGFP51858 240 aaKnown RBP20.36■□□□□ 0.85
CHEK2-213ENST00000433028 SPHKAPQ2M3C7 1700 aa20.34■□□□□ 0.85
CHEK2-213ENST00000433028 PPP1R15AO75807 674 aaPredicted RBP20.32■□□□□ 0.84
CHEK2-213ENST00000433028 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.32■□□□□ 0.84
CHEK2-213ENST00000433028 BCANQ96GW7 911 aa20.32■□□□□ 0.84
CHEK2-213ENST00000433028 PROSER2Q86WR7 435 aaPredicted RBP20.31■□□□□ 0.84
CHEK2-213ENST00000433028 FAM135BQ49AJ0 1406 aa20.31■□□□□ 0.84
CHEK2-213ENST00000433028 DIP2AQ14689 1571 aa20.3■□□□□ 0.84
CHEK2-213ENST00000433028 CHGAP10645 457 aaKnown RBP20.29■□□□□ 0.84
CHEK2-213ENST00000433028 TBX22Q9Y458 520 aa20.29■□□□□ 0.84
CHEK2-213ENST00000433028 ADAMTS13Q76LX8 1427 aa20.28■□□□□ 0.84
CHEK2-213ENST00000433028 ROBO1Q9Y6N7 1651 aa20.27■□□□□ 0.84
CHEK2-213ENST00000433028 NAIPQ13075 1403 aa20.27■□□□□ 0.84
CHEK2-213ENST00000433028 RBM33Q96EV2 1170 aaKnown RBP20.27■□□□□ 0.83
CHEK2-213ENST00000433028 PIK3R4Q99570 1358 aa20.25■□□□□ 0.83
CHEK2-213ENST00000433028 MSH6P52701 1360 aa20.25■□□□□ 0.83
CHEK2-213ENST00000433028 NCOA3Q9Y6Q9 1424 aa20.23■□□□□ 0.83
CHEK2-213ENST00000433028 NUTM2DQ5VT03 806 aaPredicted RBP20.23■□□□□ 0.83
CHEK2-213ENST00000433028 NRXN3Q9Y4C0 1643 aa20.22■□□□□ 0.83
CHEK2-213ENST00000433028 TRPM2O94759 1503 aa20.22■□□□□ 0.83
CHEK2-213ENST00000433028 CLTCL1P53675 1640 aa20.21■□□□□ 0.83
CHEK2-213ENST00000433028 KIF1BO60333 1816 aa20.2■□□□□ 0.82
CHEK2-213ENST00000433028 SETBP1Q9Y6X0 1596 aa20.2■□□□□ 0.82
CHEK2-213ENST00000433028 HFM1A2PYH4 1435 aa20.2■□□□□ 0.82
CHEK2-213ENST00000433028 SLAIN2Q9P270 581 aa20.18■□□□□ 0.82
CHEK2-213ENST00000433028 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.18■□□□□ 0.82
CHEK2-213ENST00000433028 PHLPP1O60346 1717 aa20.16■□□□□ 0.82
CHEK2-213ENST00000433028 XRN1Q8IZH2 1706 aaKnown RBP20.16■□□□□ 0.82
CHEK2-213ENST00000433028 PTPRUQ92729 1446 aa20.16■□□□□ 0.82
CHEK2-213ENST00000433028 NEXMIFQ5QGS0 1516 aa20.15■□□□□ 0.82
CHEK2-213ENST00000433028 ZNF326Q5BKZ1 582 aaKnown RBP20.13■□□□□ 0.81
CHEK2-213ENST00000433028 AMOTL2Q9Y2J4 779 aa20.13■□□□□ 0.81
CHEK2-213ENST00000433028 C19orf44Q9H6X5 657 aa20.12■□□□□ 0.81
CHEK2-213ENST00000433028 C14orf37Q86TY3 774 aa20.1■□□□□ 0.81
CHEK2-213ENST00000433028 CADPS2Q86UW7 1296 aa20.1■□□□□ 0.81
CHEK2-213ENST00000433028 COL16A1Q07092 1604 aaPredicted RBP20.1■□□□□ 0.81
CHEK2-213ENST00000433028 TRIM52Q96A61 297 aa20.08■□□□□ 0.81
CHEK2-213ENST00000433028 RGS17Q9UGC6 210 aaPredicted RBP20.08■□□□□ 0.81
CHEK2-213ENST00000433028 DCCP43146 1447 aa20.08■□□□□ 0.8
CHEK2-213ENST00000433028 METP08581 1390 aa20.08■□□□□ 0.8
CHEK2-213ENST00000433028 AHDC1Q5TGY3 1603 aaPredicted RBP20.07■□□□□ 0.8
CHEK2-213ENST00000433028 SETD1AO15047 1707 aaKnown RBP20.06■□□□□ 0.8
CHEK2-213ENST00000433028 ATF3P18847 181 aa20.06■□□□□ 0.8
CHEK2-213ENST00000433028 SLC4A1APQ9BWU0 796 aaKnown RBP20.06■□□□□ 0.8
CHEK2-213ENST00000433028 PPLO60437 1756 aa20.05■□□□□ 0.8
CHEK2-213ENST00000433028 JCADQ9P266 1359 aa20.05■□□□□ 0.8
CHEK2-213ENST00000433028 POTEDQ86YR6 584 aa20.04■□□□□ 0.8
CHEK2-213ENST00000433028 NALCNQ8IZF0 1738 aa20.01■□□□□ 0.79
CHEK2-213ENST00000433028 SHPRHQ149N8 1683 aa20.01■□□□□ 0.79
CHEK2-213ENST00000433028 RPGRIP1LQ68CZ1 1315 aa20.01■□□□□ 0.79
CHEK2-213ENST00000433028 VGFO15240 615 aaPredicted RBP20.01■□□□□ 0.79
CHEK2-213ENST00000433028 ADGRL3Q9HAR2 1447 aa19.99■□□□□ 0.79
CHEK2-213ENST00000433028 BRINP3Q76B58 766 aa19.99■□□□□ 0.79
CHEK2-213ENST00000433028 MST1RQ04912 1400 aa19.98■□□□□ 0.79
CHEK2-213ENST00000433028 NHSL1Q5SYE7 1610 aa19.98■□□□□ 0.79
CHEK2-213ENST00000433028 ASXL1Q8IXJ9 1541 aa19.98■□□□□ 0.79
CHEK2-213ENST00000433028 PTCH1Q13635 1447 aa19.97■□□□□ 0.79
CHEK2-213ENST00000433028 PRAG1Q86YV5 1406 aa19.97■□□□□ 0.79
CHEK2-213ENST00000433028 SPATA31A6Q5VVP1 1343 aa19.96■□□□□ 0.79
CHEK2-213ENST00000433028 POTEAQ6S8J7 498 aa19.96■□□□□ 0.79
CHEK2-213ENST00000433028 IFT172Q9UG01 1749 aa19.95■□□□□ 0.78
CHEK2-213ENST00000433028 LRP6O75581 1613 aa19.93■□□□□ 0.78
CHEK2-213ENST00000433028 CCDC144AA2RUR9 1427 aa19.93■□□□□ 0.78
CHEK2-213ENST00000433028 MPHOSPH9Q99550 1183 aa19.93■□□□□ 0.78
CHEK2-213ENST00000433028 ROBO2Q9HCK4 1378 aa19.92■□□□□ 0.78
CHEK2-213ENST00000433028 SPATA31E1Q6ZUB1 1445 aa19.91■□□□□ 0.78
CHEK2-213ENST00000433028 SETD5Q9C0A6 1442 aa19.91■□□□□ 0.78
CHEK2-213ENST00000433028 ACIN1Q9UKV3 1341 aaKnown RBP19.91■□□□□ 0.78
CHEK2-213ENST00000433028 LAMC1P11047 1609 aa19.89■□□□□ 0.78
CHEK2-213ENST00000433028 C1orf167Q5SNV9 1468 aa19.87■□□□□ 0.77
CHEK2-213ENST00000433028 ANKRD30BQ9BXX2 1392 aa19.87■□□□□ 0.77
CHEK2-213ENST00000433028 MSH5O43196 834 aa19.86■□□□□ 0.77
CHEK2-213ENST00000433028 ADGRF5Q8IZF2 1346 aa19.85■□□□□ 0.77
CHEK2-213ENST00000433028 MEX3CQ5U5Q3 659 aaKnown RBP19.84■□□□□ 0.77
CHEK2-213ENST00000433028 LRRC59Q96AG4 307 aaKnown RBP19.84■□□□□ 0.77
CHEK2-213ENST00000433028 KNDC1Q76NI1 1749 aa19.84■□□□□ 0.77
CHEK2-213ENST00000433028 CDC42BPGQ6DT37 1551 aa19.83■□□□□ 0.77
CHEK2-213ENST00000433028 RGL3Q3MIN7 710 aa19.83■□□□□ 0.77
CHEK2-213ENST00000433028 TECPR2O15040 1411 aa19.83■□□□□ 0.76
CHEK2-213ENST00000433028 ZNF772Q68DY9 489 aaPredicted RBP19.82■□□□□ 0.76
CHEK2-213ENST00000433028 PIK3C2GO75747 1445 aa19.82■□□□□ 0.76
CHEK2-213ENST00000433028 DDX17Q92841 729 aaKnown RBP19.81■□□□□ 0.76
CHEK2-213ENST00000433028 PNPLA6Q8IY17 1366 aa19.8■□□□□ 0.76
CHEK2-213ENST00000433028 LRPPRCP42704 1394 aaKnown RBP19.79■□□□□ 0.76
CHEK2-213ENST00000433028 NUTM2BA6NNL0 878 aaPredicted RBP19.78■□□□□ 0.76
CHEK2-213ENST00000433028 NUTM2EB1AL46 878 aaPredicted RBP19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms