RNA–Protein interactions for RNA: ENST00000432877.5

CNOT9-204, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 3

Gene CNOT9, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-204ENST00000432877 NKTRP30414 1462 aaKnown RBP27.13■■□□□ 1.93
CNOT9-204ENST00000432877 XIRP1Q702N8 1843 aaKnown RBP27.11■■□□□ 1.93
CNOT9-204ENST00000432877 MSH6P52701 1360 aa27.11■■□□□ 1.93
CNOT9-204ENST00000432877 PPP1R15AO75807 674 aaPredicted RBP27.11■■□□□ 1.93
CNOT9-204ENST00000432877 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.11■■□□□ 1.93
CNOT9-204ENST00000432877 PLEKHG1Q9ULL1 1385 aa27.1■■□□□ 1.93
CNOT9-204ENST00000432877 TBX22Q9Y458 520 aa27.1■■□□□ 1.93
CNOT9-204ENST00000432877 RBM33Q96EV2 1170 aaKnown RBP27.09■■□□□ 1.93
CNOT9-204ENST00000432877 SLAIN2Q9P270 581 aa27.09■■□□□ 1.93
CNOT9-204ENST00000432877 ZFYVE9O95405 1425 aa27.07■■□□□ 1.92
CNOT9-204ENST00000432877 RIMS2Q9UQ26 1411 aa27.07■■□□□ 1.92
CNOT9-204ENST00000432877 NWD1Q149M9 1564 aa27.05■■□□□ 1.92
CNOT9-204ENST00000432877 NCOA3Q9Y6Q9 1424 aa27.05■■□□□ 1.92
CNOT9-204ENST00000432877 ROCK1Q13464 1354 aa27.01■■□□□ 1.91
CNOT9-204ENST00000432877 CHGAP10645 457 aaKnown RBP27■■□□□ 1.91
CNOT9-204ENST00000432877 ROBO1Q9Y6N7 1651 aa26.98■■□□□ 1.91
CNOT9-204ENST00000432877 POTEAQ6S8J7 498 aa26.98■■□□□ 1.91
CNOT9-204ENST00000432877 PIK3R4Q99570 1358 aa26.97■■□□□ 1.91
CNOT9-204ENST00000432877 JCADQ9P266 1359 aa26.97■■□□□ 1.91
CNOT9-204ENST00000432877 TMEM131LA2VDJ0 1609 aa26.96■■□□□ 1.91
CNOT9-204ENST00000432877 CADPS2Q86UW7 1296 aa26.95■■□□□ 1.9
CNOT9-204ENST00000432877 C19orf44Q9H6X5 657 aa26.95■■□□□ 1.9
CNOT9-204ENST00000432877 C14orf37Q86TY3 774 aa26.94■■□□□ 1.9
CNOT9-204ENST00000432877 UNC13BO14795 1591 aa26.92■■□□□ 1.9
CNOT9-204ENST00000432877 ATF3P18847 181 aa26.91■■□□□ 1.9
CNOT9-204ENST00000432877 NUP155O75694 1391 aa26.91■■□□□ 1.9
CNOT9-204ENST00000432877 ADAMTS13Q76LX8 1427 aa26.9■■□□□ 1.9
CNOT9-204ENST00000432877 GCC2Q8IWJ2 1684 aa26.9■■□□□ 1.9
CNOT9-204ENST00000432877 CHD2O14647 1828 aaKnown RBP26.9■■□□□ 1.9
CNOT9-204ENST00000432877 NUTM2DQ5VT03 806 aaPredicted RBP26.88■■□□□ 1.89
CNOT9-204ENST00000432877 DIP2AQ14689 1571 aa26.87■■□□□ 1.89
CNOT9-204ENST00000432877 SPATA31A6Q5VVP1 1343 aa26.87■■□□□ 1.89
CNOT9-204ENST00000432877 AMOTL2Q9Y2J4 779 aa26.86■■□□□ 1.89
CNOT9-204ENST00000432877 IQGAP3Q86VI3 1631 aa26.83■■□□□ 1.88
CNOT9-204ENST00000432877 E9PCH4 1651 aa26.82■■□□□ 1.88
CNOT9-204ENST00000432877 PHLPP1O60346 1717 aa26.82■■□□□ 1.88
CNOT9-204ENST00000432877 MYO5BQ9ULV0 1848 aa26.81■■□□□ 1.88
CNOT9-204ENST00000432877 ITGAEP38570 1179 aa26.79■■□□□ 1.88
CNOT9-204ENST00000432877 ZNF772Q68DY9 489 aaPredicted RBP26.79■■□□□ 1.88
CNOT9-204ENST00000432877 TRPM2O94759 1503 aa26.79■■□□□ 1.88
CNOT9-204ENST00000432877 MEX3CQ5U5Q3 659 aaKnown RBP26.77■■□□□ 1.88
CNOT9-204ENST00000432877 COL16A1Q07092 1604 aaPredicted RBP26.76■■□□□ 1.87
CNOT9-204ENST00000432877 DCCP43146 1447 aa26.75■■□□□ 1.87
CNOT9-204ENST00000432877 BRINP3Q76B58 766 aa26.75■■□□□ 1.87
CNOT9-204ENST00000432877 PTPRUQ92729 1446 aa26.74■■□□□ 1.87
CNOT9-204ENST00000432877 ZNF326Q5BKZ1 582 aaKnown RBP26.74■■□□□ 1.87
CNOT9-204ENST00000432877 AHDC1Q5TGY3 1603 aaPredicted RBP26.73■■□□□ 1.87
CNOT9-204ENST00000432877 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.72■■□□□ 1.87
CNOT9-204ENST00000432877 SETBP1Q9Y6X0 1596 aa26.67■■□□□ 1.86
CNOT9-204ENST00000432877 LRP6O75581 1613 aa26.67■■□□□ 1.86
CNOT9-204ENST00000432877 LRRC59Q96AG4 307 aaKnown RBP26.66■■□□□ 1.86
CNOT9-204ENST00000432877 METP08581 1390 aa26.65■■□□□ 1.86
CNOT9-204ENST00000432877 SETD5Q9C0A6 1442 aa26.64■■□□□ 1.85
CNOT9-204ENST00000432877 RXRBP28702 533 aa26.63■■□□□ 1.85
CNOT9-204ENST00000432877 SHPRHQ149N8 1683 aa26.61■■□□□ 1.85
CNOT9-204ENST00000432877 PPARGC1BQ86YN6 1023 aaKnown RBP26.61■■□□□ 1.85
CNOT9-204ENST00000432877 MST1RQ04912 1400 aa26.61■■□□□ 1.85
CNOT9-204ENST00000432877 NUTM2BA6NNL0 878 aaPredicted RBP26.6■■□□□ 1.85
CNOT9-204ENST00000432877 NUTM2EB1AL46 878 aaPredicted RBP26.6■■□□□ 1.85
CNOT9-204ENST00000432877 NUTM2AQ8IVF1 878 aaPredicted RBP26.6■■□□□ 1.85
CNOT9-204ENST00000432877 NRXN3Q9Y4C0 1643 aa26.59■■□□□ 1.85
CNOT9-204ENST00000432877 VGFO15240 615 aaPredicted RBP26.59■■□□□ 1.85
CNOT9-204ENST00000432877 ASXL1Q8IXJ9 1541 aa26.59■■□□□ 1.85
CNOT9-204ENST00000432877 XRN1Q8IZH2 1706 aaKnown RBP26.59■■□□□ 1.85
CNOT9-204ENST00000432877 UPF1Q92900 1129 aaKnown RBP eCLIP26.58■■□□□ 1.85
CNOT9-204ENST00000432877 TRIM52Q96A61 297 aa26.58■■□□□ 1.85
CNOT9-204ENST00000432877 ADGRL3Q9HAR2 1447 aa26.57■■□□□ 1.84
CNOT9-204ENST00000432877 SPHKAPQ2M3C7 1700 aa26.56■■□□□ 1.84
CNOT9-204ENST00000432877 RPGRIP1LQ68CZ1 1315 aa26.55■■□□□ 1.84
CNOT9-204ENST00000432877 AFF2P51816 1311 aa26.53■■□□□ 1.84
CNOT9-204ENST00000432877 RRBP1Q9P2E9 1410 aaKnown RBP26.53■■□□□ 1.84
CNOT9-204ENST00000432877 CDK12Q9NYV4 1490 aaPredicted RBP26.53■■□□□ 1.84
CNOT9-204ENST00000432877 NAIPQ13075 1403 aa26.52■■□□□ 1.84
CNOT9-204ENST00000432877 NEXMIFQ5QGS0 1516 aa26.52■■□□□ 1.84
CNOT9-204ENST00000432877 QTRT2Q9H974 415 aaKnown RBP26.48■■□□□ 1.83
CNOT9-204ENST00000432877 SETD1AO15047 1707 aaKnown RBP26.48■■□□□ 1.83
CNOT9-204ENST00000432877 PTCH1Q13635 1447 aa26.48■■□□□ 1.83
CNOT9-204ENST00000432877 PNPLA6Q8IY17 1366 aa26.47■■□□□ 1.83
CNOT9-204ENST00000432877 CLTCL1P53675 1640 aa26.47■■□□□ 1.83
CNOT9-204ENST00000432877 DDX17Q92841 729 aaKnown RBP26.47■■□□□ 1.83
CNOT9-204ENST00000432877 C8orf37Q96NL8 207 aa26.47■■□□□ 1.83
CNOT9-204ENST00000432877 C1orf167Q5SNV9 1468 aa26.47■■□□□ 1.83
CNOT9-204ENST00000432877 RBM6P78332 1123 aaKnown RBP26.46■■□□□ 1.83
CNOT9-204ENST00000432877 NHSL1Q5SYE7 1610 aa26.46■■□□□ 1.83
CNOT9-204ENST00000432877 SLC4A1APQ9BWU0 796 aaKnown RBP26.45■■□□□ 1.82
CNOT9-204ENST00000432877 SOS2Q07890 1332 aaPredicted RBP26.43■■□□□ 1.82
CNOT9-204ENST00000432877 PRAG1Q86YV5 1406 aa26.43■■□□□ 1.82
CNOT9-204ENST00000432877 NGLY1Q96IV0 654 aa26.42■■□□□ 1.82
CNOT9-204ENST00000432877 ROBO2Q9HCK4 1378 aa26.42■■□□□ 1.82
CNOT9-204ENST00000432877 HFM1A2PYH4 1435 aa26.41■■□□□ 1.82
CNOT9-204ENST00000432877 ORAI2Q96SN7 254 aa26.4■■□□□ 1.82
CNOT9-204ENST00000432877 KIF1BO60333 1816 aa26.39■■□□□ 1.81
CNOT9-204ENST00000432877 ADAMTS2O95450 1211 aa26.37■■□□□ 1.81
CNOT9-204ENST00000432877 NALCNQ8IZF0 1738 aa26.35■■□□□ 1.81
CNOT9-204ENST00000432877 LAMC1P11047 1609 aa26.33■■□□□ 1.81
CNOT9-204ENST00000432877 FNBP4Q8N3X1 1017 aaPredicted RBP26.33■■□□□ 1.81
CNOT9-204ENST00000432877 USP21Q9UK80 565 aa26.32■■□□□ 1.8
CNOT9-204ENST00000432877 TRPC5Q9UL62 973 aaPredicted RBP26.32■■□□□ 1.8
CNOT9-204ENST00000432877 NPHP3Q7Z494 1330 aa26.32■■□□□ 1.8
CNOT9-204ENST00000432877 RGS12O14924 1447 aa26.3■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms