RNA–Protein interactions for RNA: ENST00000432213.1

SEC13-212, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 594 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-212ENST00000432213 STAG3Q9UJ98 1225 aa22.13■■□□□ 1.13
SEC13-212ENST00000432213 RPRD2Q5VT52 1461 aaKnown RBP22.13■■□□□ 1.13
SEC13-212ENST00000432213 IQGAP3Q86VI3 1631 aa22.13■■□□□ 1.13
SEC13-212ENST00000432213 TMEM94Q12767 1356 aa22.12■■□□□ 1.13
SEC13-212ENST00000432213 KCNA6P17658 529 aa22.06■■□□□ 1.12
SEC13-212ENST00000432213 NKTRP30414 1462 aaKnown RBP22.06■■□□□ 1.12
SEC13-212ENST00000432213 RIMS2Q9UQ26 1411 aa22.06■■□□□ 1.12
SEC13-212ENST00000432213 PPARGC1BQ86YN6 1023 aaKnown RBP22.05■■□□□ 1.12
SEC13-212ENST00000432213 SLC52A1Q9NWF4 448 aa22.03■■□□□ 1.12
SEC13-212ENST00000432213 RGS17Q9UGC6 210 aaPredicted RBP22.03■■□□□ 1.12
SEC13-212ENST00000432213 PLEKHG1Q9ULL1 1385 aa22.02■■□□□ 1.12
SEC13-212ENST00000432213 FAM135BQ49AJ0 1406 aa22.02■■□□□ 1.12
SEC13-212ENST00000432213 ROCK1Q13464 1354 aa22.01■■□□□ 1.11
SEC13-212ENST00000432213 ADAMTS13Q76LX8 1427 aa22■■□□□ 1.11
SEC13-212ENST00000432213 NRXN3Q9Y4C0 1643 aa22■■□□□ 1.11
SEC13-212ENST00000432213 NUTM2DQ5VT03 806 aaPredicted RBP22■■□□□ 1.11
SEC13-212ENST00000432213 PROSER2Q86WR7 435 aaPredicted RBP22■■□□□ 1.11
SEC13-212ENST00000432213 PHLPP1O60346 1717 aa22■■□□□ 1.11
SEC13-212ENST00000432213 SPHKAPQ2M3C7 1700 aa22■■□□□ 1.11
SEC13-212ENST00000432213 PHF23Q9BUL5 403 aaPredicted RBP21.99■■□□□ 1.11
SEC13-212ENST00000432213 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.97■■□□□ 1.11
SEC13-212ENST00000432213 ITGAEP38570 1179 aa21.96■■□□□ 1.11
SEC13-212ENST00000432213 BCANQ96GW7 911 aa21.95■■□□□ 1.1
SEC13-212ENST00000432213 COL16A1Q07092 1604 aaPredicted RBP21.95■■□□□ 1.1
SEC13-212ENST00000432213 CHGAP10645 457 aaKnown RBP21.93■■□□□ 1.1
SEC13-212ENST00000432213 DIP2AQ14689 1571 aa21.93■■□□□ 1.1
SEC13-212ENST00000432213 PTPRUQ92729 1446 aa21.92■■□□□ 1.1
SEC13-212ENST00000432213 NUP155O75694 1391 aa21.92■■□□□ 1.1
SEC13-212ENST00000432213 CLTCL1P53675 1640 aa21.91■■□□□ 1.1
SEC13-212ENST00000432213 PPP1R15AO75807 674 aaPredicted RBP21.91■■□□□ 1.1
SEC13-212ENST00000432213 SETD1AO15047 1707 aaKnown RBP21.91■■□□□ 1.1
SEC13-212ENST00000432213 XRN1Q8IZH2 1706 aaKnown RBP21.91■■□□□ 1.1
SEC13-212ENST00000432213 MSH6P52701 1360 aa21.9■■□□□ 1.1
SEC13-212ENST00000432213 TRPM2O94759 1503 aa21.87■■□□□ 1.09
SEC13-212ENST00000432213 TBX22Q9Y458 520 aa21.87■■□□□ 1.09
SEC13-212ENST00000432213 POTEAQ6S8J7 498 aa21.86■■□□□ 1.09
SEC13-212ENST00000432213 SLAIN2Q9P270 581 aa21.85■■□□□ 1.09
SEC13-212ENST00000432213 SETBP1Q9Y6X0 1596 aa21.85■■□□□ 1.09
SEC13-212ENST00000432213 LRP6O75581 1613 aa21.84■■□□□ 1.09
SEC13-212ENST00000432213 NEXMIFQ5QGS0 1516 aa21.83■■□□□ 1.09
SEC13-212ENST00000432213 AHDC1Q5TGY3 1603 aaPredicted RBP21.82■■□□□ 1.08
SEC13-212ENST00000432213 NALCNQ8IZF0 1738 aa21.81■■□□□ 1.08
SEC13-212ENST00000432213 RRBP1Q9P2E9 1410 aaKnown RBP21.8■■□□□ 1.08
SEC13-212ENST00000432213 KIF1BO60333 1816 aa21.8■■□□□ 1.08
SEC13-212ENST00000432213 SHPRHQ149N8 1683 aa21.8■■□□□ 1.08
SEC13-212ENST00000432213 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.8■■□□□ 1.08
SEC13-212ENST00000432213 NAIPQ13075 1403 aa21.79■■□□□ 1.08
SEC13-212ENST00000432213 NCOA3Q9Y6Q9 1424 aa21.79■■□□□ 1.08
SEC13-212ENST00000432213 METP08581 1390 aa21.78■■□□□ 1.08
SEC13-212ENST00000432213 PIK3R4Q99570 1358 aa21.78■■□□□ 1.08
SEC13-212ENST00000432213 HDGFP51858 240 aaKnown RBP21.76■■□□□ 1.07
SEC13-212ENST00000432213 AMOTL2Q9Y2J4 779 aa21.76■■□□□ 1.07
SEC13-212ENST00000432213 NHSL1Q5SYE7 1610 aa21.76■■□□□ 1.07
SEC13-212ENST00000432213 JCADQ9P266 1359 aa21.75■■□□□ 1.07
SEC13-212ENST00000432213 C14orf37Q86TY3 774 aa21.74■■□□□ 1.07
SEC13-212ENST00000432213 ASXL1Q8IXJ9 1541 aa21.73■■□□□ 1.07
SEC13-212ENST00000432213 MST1RQ04912 1400 aa21.72■■□□□ 1.07
SEC13-212ENST00000432213 C19orf44Q9H6X5 657 aa21.71■■□□□ 1.07
SEC13-212ENST00000432213 PPLO60437 1756 aa21.71■■□□□ 1.07
SEC13-212ENST00000432213 BRINP3Q76B58 766 aa21.7■■□□□ 1.06
SEC13-212ENST00000432213 ZNF326Q5BKZ1 582 aaKnown RBP21.68■■□□□ 1.06
SEC13-212ENST00000432213 CADPS2Q86UW7 1296 aa21.68■■□□□ 1.06
SEC13-212ENST00000432213 DCCP43146 1447 aa21.67■■□□□ 1.06
SEC13-212ENST00000432213 ATF3P18847 181 aa21.66■■□□□ 1.06
SEC13-212ENST00000432213 DDX17Q92841 729 aaKnown RBP21.65■■□□□ 1.06
SEC13-212ENST00000432213 HFM1A2PYH4 1435 aa21.64■■□□□ 1.06
SEC13-212ENST00000432213 ADGRL3Q9HAR2 1447 aa21.64■■□□□ 1.06
SEC13-212ENST00000432213 IFT172Q9UG01 1749 aa21.6■■□□□ 1.05
SEC13-212ENST00000432213 SPATA31A6Q5VVP1 1343 aa21.6■■□□□ 1.05
SEC13-212ENST00000432213 LAMC1P11047 1609 aa21.59■■□□□ 1.05
SEC13-212ENST00000432213 ROBO2Q9HCK4 1378 aa21.59■■□□□ 1.05
SEC13-212ENST00000432213 SETD5Q9C0A6 1442 aa21.58■■□□□ 1.05
SEC13-212ENST00000432213 FOXD1Q16676 465 aa21.58■■□□□ 1.05
SEC13-212ENST00000432213 NUTM2BA6NNL0 878 aaPredicted RBP21.56■■□□□ 1.04
SEC13-212ENST00000432213 NUTM2EB1AL46 878 aaPredicted RBP21.56■■□□□ 1.04
SEC13-212ENST00000432213 NUTM2AQ8IVF1 878 aaPredicted RBP21.56■■□□□ 1.04
SEC13-212ENST00000432213 PTCH1Q13635 1447 aa21.55■■□□□ 1.04
SEC13-212ENST00000432213 TRIM52Q96A61 297 aa21.55■■□□□ 1.04
SEC13-212ENST00000432213 C1orf167Q5SNV9 1468 aa21.55■■□□□ 1.04
SEC13-212ENST00000432213 MEX3CQ5U5Q3 659 aaKnown RBP21.54■■□□□ 1.04
SEC13-212ENST00000432213 PNPLA6Q8IY17 1366 aa21.53■■□□□ 1.04
SEC13-212ENST00000432213 PRAG1Q86YV5 1406 aa21.53■■□□□ 1.04
SEC13-212ENST00000432213 SLC4A1APQ9BWU0 796 aaKnown RBP21.5■■□□□ 1.03
SEC13-212ENST00000432213 ORAI2Q96SN7 254 aa21.48■■□□□ 1.03
SEC13-212ENST00000432213 AFF2P51816 1311 aa21.48■■□□□ 1.03
SEC13-212ENST00000432213 SPATA31E1Q6ZUB1 1445 aa21.47■■□□□ 1.03
SEC13-212ENST00000432213 ADGRF5Q8IZF2 1346 aa21.47■■□□□ 1.03
SEC13-212ENST00000432213 KNDC1Q76NI1 1749 aa21.46■■□□□ 1.03
SEC13-212ENST00000432213 CDC42BPGQ6DT37 1551 aa21.46■■□□□ 1.03
SEC13-212ENST00000432213 COL22A1Q8NFW1 1626 aaPredicted RBP21.45■■□□□ 1.02
SEC13-212ENST00000432213 ZNF772Q68DY9 489 aaPredicted RBP21.45■■□□□ 1.02
SEC13-212ENST00000432213 VGFO15240 615 aaPredicted RBP21.44■■□□□ 1.02
SEC13-212ENST00000432213 RGS12O14924 1447 aa21.43■■□□□ 1.02
SEC13-212ENST00000432213 MARF1Q9Y4F3 1742 aaKnown RBP21.43■■□□□ 1.02
SEC13-212ENST00000432213 RGPD8O14715 1765 aaPredicted RBP21.43■■□□□ 1.02
SEC13-212ENST00000432213 RPGRIP1LQ68CZ1 1315 aa21.42■■□□□ 1.02
SEC13-212ENST00000432213 UPF1Q92900 1129 aaKnown RBP eCLIP21.42■■□□□ 1.02
SEC13-212ENST00000432213 LRRC59Q96AG4 307 aaKnown RBP21.42■■□□□ 1.02
SEC13-212ENST00000432213 PLEKHH1Q9ULM0 1364 aa21.41■■□□□ 1.02
SEC13-212ENST00000432213 C8orf37Q96NL8 207 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms