RNA–Protein interactions for RNA: ENST00000431547.1

RFTN1-202, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 5

Gene RFTN1, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-202ENST00000431547 MED14O60244 1454 aa26.93■■□□□ 1.9
RFTN1-202ENST00000431547 SPATA31E1Q6ZUB1 1445 aa26.92■■□□□ 1.9
RFTN1-202ENST00000431547 RPGRIP1LQ68CZ1 1315 aa26.91■■□□□ 1.9
RFTN1-202ENST00000431547 NPHP4O75161 1426 aaPredicted RBP26.9■■□□□ 1.9
RFTN1-202ENST00000431547 NEURL4Q96JN8 1562 aa26.88■■□□□ 1.89
RFTN1-202ENST00000431547 KIF1BO60333 1816 aa26.88■■□□□ 1.89
RFTN1-202ENST00000431547 RGL3Q3MIN7 710 aa26.88■■□□□ 1.89
RFTN1-202ENST00000431547 PPP1R15AO75807 674 aaPredicted RBP26.87■■□□□ 1.89
RFTN1-202ENST00000431547 MYO5BQ9ULV0 1848 aa26.86■■□□□ 1.89
RFTN1-202ENST00000431547 NUTM2DQ5VT03 806 aaPredicted RBP26.85■■□□□ 1.89
RFTN1-202ENST00000431547 POLR1AO95602 1720 aaPredicted RBP26.85■■□□□ 1.89
RFTN1-202ENST00000431547 PLEKHG1Q9ULL1 1385 aa26.84■■□□□ 1.89
RFTN1-202ENST00000431547 VGFO15240 615 aaPredicted RBP26.83■■□□□ 1.89
RFTN1-202ENST00000431547 NEXMIFQ5QGS0 1516 aa26.82■■□□□ 1.88
RFTN1-202ENST00000431547 SIN3AQ96ST3 1273 aa26.79■■□□□ 1.88
RFTN1-202ENST00000431547 BCANQ96GW7 911 aa26.78■■□□□ 1.88
RFTN1-202ENST00000431547 IQGAP1P46940 1657 aa26.77■■□□□ 1.88
RFTN1-202ENST00000431547 SLC26A8Q96RN1 970 aa26.75■■□□□ 1.87
RFTN1-202ENST00000431547 STAC3Q96MF2 364 aa26.74■■□□□ 1.87
RFTN1-202ENST00000431547 TBX22Q9Y458 520 aa26.74■■□□□ 1.87
RFTN1-202ENST00000431547 NEUROD1Q13562 356 aa26.73■■□□□ 1.87
RFTN1-202ENST00000431547 CLSPNQ9HAW4 1339 aa26.72■■□□□ 1.87
RFTN1-202ENST00000431547 SENP3Q9H4L4 574 aaPredicted RBP26.72■■□□□ 1.87
RFTN1-202ENST00000431547 ADGRF5Q8IZF2 1346 aa26.71■■□□□ 1.87
RFTN1-202ENST00000431547 ADAMTS13Q76LX8 1427 aa26.71■■□□□ 1.87
RFTN1-202ENST00000431547 DCAF11Q8TEB1 546 aa26.7■■□□□ 1.86
RFTN1-202ENST00000431547 PPLO60437 1756 aa26.69■■□□□ 1.86
RFTN1-202ENST00000431547 SETBP1Q9Y6X0 1596 aa26.69■■□□□ 1.86
RFTN1-202ENST00000431547 ZNF335Q9H4Z2 1342 aaPredicted RBP26.68■■□□□ 1.86
RFTN1-202ENST00000431547 MYOM2P54296 1465 aa26.68■■□□□ 1.86
RFTN1-202ENST00000431547 CCER1Q8TC90 406 aaPredicted RBP26.66■■□□□ 1.86
RFTN1-202ENST00000431547 KDM2AQ9Y2K7 1162 aa26.66■■□□□ 1.86
RFTN1-202ENST00000431547 IFT172Q9UG01 1749 aa26.65■■□□□ 1.86
RFTN1-202ENST00000431547 DIP2AQ14689 1571 aa26.64■■□□□ 1.86
RFTN1-202ENST00000431547 NRXN1Q9ULB1 1477 aa26.64■■□□□ 1.86
RFTN1-202ENST00000431547 L3MBTL2Q969R5 705 aa26.64■■□□□ 1.86
RFTN1-202ENST00000431547 PIK3R4Q99570 1358 aa26.63■■□□□ 1.85
RFTN1-202ENST00000431547 PIK3C2GO75747 1445 aa26.63■■□□□ 1.85
RFTN1-202ENST00000431547 NRXN3Q9Y4C0 1643 aa26.62■■□□□ 1.85
RFTN1-202ENST00000431547 KCNA6P17658 529 aa26.62■■□□□ 1.85
RFTN1-202ENST00000431547 LTBP4Q8N2S1 1624 aa26.59■■□□□ 1.85
RFTN1-202ENST00000431547 C14orf93Q9H972 538 aaKnown RBP26.59■■□□□ 1.85
RFTN1-202ENST00000431547 METP08581 1390 aa26.58■■□□□ 1.85
RFTN1-202ENST00000431547 ALKQ9UM73 1620 aa26.57■■□□□ 1.84
RFTN1-202ENST00000431547 TONSLQ96HA7 1378 aa26.56■■□□□ 1.84
RFTN1-202ENST00000431547 CFAP70Q5T0N1 1121 aa26.54■■□□□ 1.84
RFTN1-202ENST00000431547 CPS1P31327 1500 aa26.54■■□□□ 1.84
RFTN1-202ENST00000431547 AMOTL2Q9Y2J4 779 aa26.53■■□□□ 1.84
RFTN1-202ENST00000431547 PTPRUQ92729 1446 aa26.52■■□□□ 1.84
RFTN1-202ENST00000431547 CERKQ8TCT0 537 aa26.51■■□□□ 1.83
RFTN1-202ENST00000431547 TIMELESSQ9UNS1 1208 aa26.51■■□□□ 1.83
RFTN1-202ENST00000431547 NWD1Q149M9 1564 aa26.5■■□□□ 1.83
RFTN1-202ENST00000431547 PRAG1Q86YV5 1406 aa26.5■■□□□ 1.83
RFTN1-202ENST00000431547 TMEM132EQ6IEE7 984 aa26.48■■□□□ 1.83
RFTN1-202ENST00000431547 NKTRP30414 1462 aaKnown RBP26.48■■□□□ 1.83
RFTN1-202ENST00000431547 SETD1AO15047 1707 aaKnown RBP26.48■■□□□ 1.83
RFTN1-202ENST00000431547 PROSER2Q86WR7 435 aaPredicted RBP26.47■■□□□ 1.83
RFTN1-202ENST00000431547 STRCP1A6NGW2 1772 aa26.47■■□□□ 1.83
RFTN1-202ENST00000431547 CHD2O14647 1828 aaKnown RBP26.46■■□□□ 1.83
RFTN1-202ENST00000431547 LRRC7Q96NW7 1537 aa26.46■■□□□ 1.83
RFTN1-202ENST00000431547 LAMC1P11047 1609 aa26.44■■□□□ 1.82
RFTN1-202ENST00000431547 LRPPRCP42704 1394 aaKnown RBP26.44■■□□□ 1.82
RFTN1-202ENST00000431547 ASXL1Q8IXJ9 1541 aa26.43■■□□□ 1.82
RFTN1-202ENST00000431547 ABCC11Q96J66 1382 aa26.42■■□□□ 1.82
RFTN1-202ENST00000431547 XRN1Q8IZH2 1706 aaKnown RBP26.41■■□□□ 1.82
RFTN1-202ENST00000431547 TMEM94Q12767 1356 aa26.41■■□□□ 1.82
RFTN1-202ENST00000431547 IQSEC2Q5JU85 1478 aa26.41■■□□□ 1.82
RFTN1-202ENST00000431547 YTHDC2Q9H6S0 1430 aaKnown RBP26.4■■□□□ 1.82
RFTN1-202ENST00000431547 NBPF8Q3BBV2 869 aa26.4■■□□□ 1.82
RFTN1-202ENST00000431547 STK26Q9P289 416 aa26.4■■□□□ 1.82
RFTN1-202ENST00000431547 ADGRB1O14514 1584 aa26.39■■□□□ 1.82
RFTN1-202ENST00000431547 NCOA3Q9Y6Q9 1424 aa26.39■■□□□ 1.81
RFTN1-202ENST00000431547 NBPF1Q3BBV0 1214 aa26.38■■□□□ 1.81
RFTN1-202ENST00000431547 SIRT1Q96EB6 747 aa26.38■■□□□ 1.81
RFTN1-202ENST00000431547 TECPR2O15040 1411 aa26.38■■□□□ 1.81
RFTN1-202ENST00000431547 PTCH1Q13635 1447 aa26.38■■□□□ 1.81
RFTN1-202ENST00000431547 ROBO2Q9HCK4 1378 aa26.37■■□□□ 1.81
RFTN1-202ENST00000431547 RBM33Q96EV2 1170 aaKnown RBP26.37■■□□□ 1.81
RFTN1-202ENST00000431547 KIAA1210Q9ULL0 1709 aa26.35■■□□□ 1.81
RFTN1-202ENST00000431547 FAM135BQ49AJ0 1406 aa26.31■■□□□ 1.8
RFTN1-202ENST00000431547 C19orf44Q9H6X5 657 aa26.3■■□□□ 1.8
RFTN1-202ENST00000431547 TRAK1Q9UPV9 953 aa26.3■■□□□ 1.8
RFTN1-202ENST00000431547 WAPLQ7Z5K2 1190 aa26.29■■□□□ 1.8
RFTN1-202ENST00000431547 C14orf37Q86TY3 774 aa26.29■■□□□ 1.8
RFTN1-202ENST00000431547 ROCK2O75116 1388 aaKnown RBP26.29■■□□□ 1.8
RFTN1-202ENST00000431547 DLC1Q96QB1 1528 aa26.28■■□□□ 1.8
RFTN1-202ENST00000431547 TRPM1Q7Z4N2 1603 aa26.28■■□□□ 1.8
RFTN1-202ENST00000431547 MSH6P52701 1360 aa26.27■■□□□ 1.8
RFTN1-202ENST00000431547 KNDC1Q76NI1 1749 aa26.26■■□□□ 1.79
RFTN1-202ENST00000431547 GPRASP1Q5JY77 1395 aa26.26■■□□□ 1.79
RFTN1-202ENST00000431547 PRAM1Q96QH2 718 aa26.26■■□□□ 1.79
RFTN1-202ENST00000431547 RALGAPBQ86X10 1494 aa26.25■■□□□ 1.79
RFTN1-202ENST00000431547 PLEKHH1Q9ULM0 1364 aa26.24■■□□□ 1.79
RFTN1-202ENST00000431547 XIRP1Q702N8 1843 aaKnown RBP26.24■■□□□ 1.79
RFTN1-202ENST00000431547 TOM1O60784 492 aa26.24■■□□□ 1.79
RFTN1-202ENST00000431547 POGKQ9P215 609 aa26.24■■□□□ 1.79
RFTN1-202ENST00000431547 ADGRL3Q9HAR2 1447 aa26.23■■□□□ 1.79
RFTN1-202ENST00000431547 UBAP1LF5GYI3 381 aa26.23■■□□□ 1.79
RFTN1-202ENST00000431547 CARD11Q9BXL7 1154 aa26.21■■□□□ 1.79
RFTN1-202ENST00000431547 ATF3P18847 181 aa26.2■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms