RNA–Protein interactions for RNA: ENST00000431164.1

SH3KBP1-206, Transcript of SH3 domain containing kinase binding protein 1, humanhuman

TSL 3

Gene SH3KBP1, Length 518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1-206ENST00000431164 COL16A1Q07092 1604 aaPredicted RBP16.38■□□□□ 0.21
SH3KBP1-206ENST00000431164 ZFYVE9O95405 1425 aa16.38■□□□□ 0.21
SH3KBP1-206ENST00000431164 SLC52A1Q9NWF4 448 aa16.38■□□□□ 0.21
SH3KBP1-206ENST00000431164 JCADQ9P266 1359 aa16.38■□□□□ 0.21
SH3KBP1-206ENST00000431164 MSH6P52701 1360 aa16.37■□□□□ 0.21
SH3KBP1-206ENST00000431164 LOC105371045A0A1W2PR82 267 aa16.35■□□□□ 0.21
SH3KBP1-206ENST00000431164 NCOA3Q9Y6Q9 1424 aa16.35■□□□□ 0.21
SH3KBP1-206ENST00000431164 ANKRD30AQ9BXX3 1397 aa16.34■□□□□ 0.21
SH3KBP1-206ENST00000431164 PLEKHG1Q9ULL1 1385 aa16.34■□□□□ 0.21
SH3KBP1-206ENST00000431164 FGD6Q6ZV73 1430 aa16.34■□□□□ 0.21
SH3KBP1-206ENST00000431164 TMEM131LA2VDJ0 1609 aa16.34■□□□□ 0.21
SH3KBP1-206ENST00000431164 LRP6O75581 1613 aa16.34■□□□□ 0.21
SH3KBP1-206ENST00000431164 RPRD2Q5VT52 1461 aaKnown RBP16.33■□□□□ 0.2
SH3KBP1-206ENST00000431164 ADGRL2O95490 1459 aa16.32■□□□□ 0.2
SH3KBP1-206ENST00000431164 SRCAPQ6ZRS2 3230 aa16.31■□□□□ 0.2
SH3KBP1-206ENST00000431164 CHIC2Q9UKJ5 165 aa16.31■□□□□ 0.2
SH3KBP1-206ENST00000431164 TBX22Q9Y458 520 aa16.31■□□□□ 0.2
SH3KBP1-206ENST00000431164 GCC2Q8IWJ2 1684 aa16.3■□□□□ 0.2
SH3KBP1-206ENST00000431164 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.3■□□□□ 0.2
SH3KBP1-206ENST00000431164 SHPRHQ149N8 1683 aa16.3■□□□□ 0.2
SH3KBP1-206ENST00000431164 AHDC1Q5TGY3 1603 aaPredicted RBP16.3■□□□□ 0.2
SH3KBP1-206ENST00000431164 RIMS2Q9UQ26 1411 aa16.29■□□□□ 0.2
SH3KBP1-206ENST00000431164 SPATA31A6Q5VVP1 1343 aa16.29■□□□□ 0.2
SH3KBP1-206ENST00000431164 UPF1Q92900 1129 aaKnown RBP eCLIP16.29■□□□□ 0.2
SH3KBP1-206ENST00000431164 ADAMTS13Q76LX8 1427 aa16.28■□□□□ 0.2
SH3KBP1-206ENST00000431164 DIP2AQ14689 1571 aa16.26■□□□□ 0.19
SH3KBP1-206ENST00000431164 HDGFP51858 240 aaKnown RBP16.25■□□□□ 0.19
SH3KBP1-206ENST00000431164 ZNF772Q68DY9 489 aaPredicted RBP16.25■□□□□ 0.19
SH3KBP1-206ENST00000431164 BCANQ96GW7 911 aa16.25■□□□□ 0.19
SH3KBP1-206ENST00000431164 C19orf44Q9H6X5 657 aa16.25■□□□□ 0.19
SH3KBP1-206ENST00000431164 PIK3R4Q99570 1358 aa16.25■□□□□ 0.19
SH3KBP1-206ENST00000431164 ANKRD50Q9ULJ7 1429 aa16.24■□□□□ 0.19
SH3KBP1-206ENST00000431164 CADPS2Q86UW7 1296 aa16.23■□□□□ 0.19
SH3KBP1-206ENST00000431164 CDK12Q9NYV4 1490 aaPredicted RBP16.22■□□□□ 0.19
SH3KBP1-206ENST00000431164 E9PCH4 1651 aa16.21■□□□□ 0.19
SH3KBP1-206ENST00000431164 PTPRUQ92729 1446 aa16.21■□□□□ 0.19
SH3KBP1-206ENST00000431164 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.21■□□□□ 0.19
SH3KBP1-206ENST00000431164 UNC13BO14795 1591 aa16.21■□□□□ 0.18
SH3KBP1-206ENST00000431164 BRINP3Q76B58 766 aa16.2■□□□□ 0.18
SH3KBP1-206ENST00000431164 PPP1R15AO75807 674 aaPredicted RBP16.19■□□□□ 0.18
SH3KBP1-206ENST00000431164 TRIM52Q96A61 297 aa16.19■□□□□ 0.18
SH3KBP1-206ENST00000431164 ATF3P18847 181 aa16.18■□□□□ 0.18
SH3KBP1-206ENST00000431164 RXRBP28702 533 aa16.18■□□□□ 0.18
SH3KBP1-206ENST00000431164 SETD5Q9C0A6 1442 aa16.18■□□□□ 0.18
SH3KBP1-206ENST00000431164 NHSL1Q5SYE7 1610 aa16.17■□□□□ 0.18
SH3KBP1-206ENST00000431164 NRXN3Q9Y4C0 1643 aa16.17■□□□□ 0.18
SH3KBP1-206ENST00000431164 MEX3CQ5U5Q3 659 aaKnown RBP16.17■□□□□ 0.18
SH3KBP1-206ENST00000431164 NUTM2DQ5VT03 806 aaPredicted RBP16.17■□□□□ 0.18
SH3KBP1-206ENST00000431164 DCCP43146 1447 aa16.17■□□□□ 0.18
SH3KBP1-206ENST00000431164 XRN1Q8IZH2 1706 aaKnown RBP16.16■□□□□ 0.18
SH3KBP1-206ENST00000431164 TRPM2O94759 1503 aa16.16■□□□□ 0.18
SH3KBP1-206ENST00000431164 AMOTL2Q9Y2J4 779 aa16.16■□□□□ 0.18
SH3KBP1-206ENST00000431164 APLP2Q06481 763 aa16.15■□□□□ 0.18
SH3KBP1-206ENST00000431164 C14orf37Q86TY3 774 aa16.15■□□□□ 0.18
SH3KBP1-206ENST00000431164 IQGAP3Q86VI3 1631 aa16.15■□□□□ 0.18
SH3KBP1-206ENST00000431164 ASXL1Q8IXJ9 1541 aa16.14■□□□□ 0.18
SH3KBP1-206ENST00000431164 MST1RQ04912 1400 aa16.14■□□□□ 0.17
SH3KBP1-206ENST00000431164 SETBP1Q9Y6X0 1596 aa16.13■□□□□ 0.17
SH3KBP1-206ENST00000431164 AFF2P51816 1311 aa16.12■□□□□ 0.17
SH3KBP1-206ENST00000431164 EP400Q96L91 3159 aa16.11■□□□□ 0.17
SH3KBP1-206ENST00000431164 CHGAP10645 457 aaKnown RBP16.11■□□□□ 0.17
SH3KBP1-206ENST00000431164 NUTM2BA6NNL0 878 aaPredicted RBP16.1■□□□□ 0.17
SH3KBP1-206ENST00000431164 NUTM2EB1AL46 878 aaPredicted RBP16.1■□□□□ 0.17
SH3KBP1-206ENST00000431164 NUTM2AQ8IVF1 878 aaPredicted RBP16.1■□□□□ 0.17
SH3KBP1-206ENST00000431164 RGS12O14924 1447 aa16.1■□□□□ 0.17
SH3KBP1-206ENST00000431164 FAM50AQ14320 339 aaKnown RBP16.09■□□□□ 0.17
SH3KBP1-206ENST00000431164 LRRC59Q96AG4 307 aaKnown RBP16.09■□□□□ 0.17
SH3KBP1-206ENST00000431164 ROCK1Q13464 1354 aa16.09■□□□□ 0.17
SH3KBP1-206ENST00000431164 LAMC1P11047 1609 aa16.08■□□□□ 0.17
SH3KBP1-206ENST00000431164 RBM6P78332 1123 aaKnown RBP16.07■□□□□ 0.16
SH3KBP1-206ENST00000431164 QTRT2Q9H974 415 aaKnown RBP16.07■□□□□ 0.16
SH3KBP1-206ENST00000431164 METP08581 1390 aa16.07■□□□□ 0.16
SH3KBP1-206ENST00000431164 PNPLA6Q8IY17 1366 aa16.07■□□□□ 0.16
SH3KBP1-206ENST00000431164 NALCNQ8IZF0 1738 aa16.05■□□□□ 0.16
SH3KBP1-206ENST00000431164 ADGRL3Q9HAR2 1447 aa16.05■□□□□ 0.16
SH3KBP1-206ENST00000431164 DDX17Q92841 729 aaKnown RBP16.05■□□□□ 0.16
SH3KBP1-206ENST00000431164 SPHKAPQ2M3C7 1700 aa16.04■□□□□ 0.16
SH3KBP1-206ENST00000431164 NUP155O75694 1391 aa16.03■□□□□ 0.16
SH3KBP1-206ENST00000431164 C8orf37Q96NL8 207 aa16.03■□□□□ 0.16
SH3KBP1-206ENST00000431164 NEXMIFQ5QGS0 1516 aa16.01■□□□□ 0.15
SH3KBP1-206ENST00000431164 C1orf167Q5SNV9 1468 aa16.01■□□□□ 0.15
SH3KBP1-206ENST00000431164 SOS2Q07890 1332 aaPredicted RBP16■□□□□ 0.15
SH3KBP1-206ENST00000431164 ADRA2BP18089 450 aa15.99■□□□□ 0.15
SH3KBP1-206ENST00000431164 FNBP4Q8N3X1 1017 aaPredicted RBP15.98■□□□□ 0.15
SH3KBP1-206ENST00000431164 PRAG1Q86YV5 1406 aa15.97■□□□□ 0.15
SH3KBP1-206ENST00000431164 NGLY1Q96IV0 654 aa15.97■□□□□ 0.15
SH3KBP1-206ENST00000431164 COL22A1Q8NFW1 1626 aaPredicted RBP15.97■□□□□ 0.15
SH3KBP1-206ENST00000431164 CLTCL1P53675 1640 aa15.96■□□□□ 0.15
SH3KBP1-206ENST00000431164 PTCH1Q13635 1447 aa15.95■□□□□ 0.14
SH3KBP1-206ENST00000431164 ADAMTS2O95450 1211 aa15.95■□□□□ 0.14
SH3KBP1-206ENST00000431164 ORAI2Q96SN7 254 aa15.95■□□□□ 0.14
SH3KBP1-206ENST00000431164 ATAD2Q6PL18 1390 aa15.95■□□□□ 0.14
SH3KBP1-206ENST00000431164 ATRNO75882 1429 aa15.94■□□□□ 0.14
SH3KBP1-206ENST00000431164 ROBO2Q9HCK4 1378 aa15.93■□□□□ 0.14
SH3KBP1-206ENST00000431164 ZNF326Q5BKZ1 582 aaKnown RBP15.93■□□□□ 0.14
SH3KBP1-206ENST00000431164 USP21Q9UK80 565 aa15.93■□□□□ 0.14
SH3KBP1-206ENST00000431164 TRPC5Q9UL62 973 aaPredicted RBP15.93■□□□□ 0.14
SH3KBP1-206ENST00000431164 KIF1BO60333 1816 aa15.93■□□□□ 0.14
SH3KBP1-206ENST00000431164 MARF1Q9Y4F3 1742 aaKnown RBP15.92■□□□□ 0.14
SH3KBP1-206ENST00000431164 MYOM2P54296 1465 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms