RNA–Protein interactions for RNA: ENST00000431037.2

PMS2P1-201, Transcript of PMS1 homolog 2, mismatch repair system component pseudogene 1, humanhuman

BASIC

Gene PMS2P1, Length 1,228 nt, Biotype unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P1-201ENST00000431037 MSH6P52701 1360 aa26.75■■□□□ 1.87
PMS2P1-201ENST00000431037 ZFYVE9O95405 1425 aa26.74■■□□□ 1.87
PMS2P1-201ENST00000431037 ANKRD50Q9ULJ7 1429 aa26.74■■□□□ 1.87
PMS2P1-201ENST00000431037 GCC2Q8IWJ2 1684 aa26.73■■□□□ 1.87
PMS2P1-201ENST00000431037 PLEKHG1Q9ULL1 1385 aa26.72■■□□□ 1.87
PMS2P1-201ENST00000431037 CHD2O14647 1828 aaKnown RBP26.71■■□□□ 1.87
PMS2P1-201ENST00000431037 MYO5BQ9ULV0 1848 aa26.7■■□□□ 1.87
PMS2P1-201ENST00000431037 BCANQ96GW7 911 aa26.7■■□□□ 1.86
PMS2P1-201ENST00000431037 TMEM131LA2VDJ0 1609 aa26.69■■□□□ 1.86
PMS2P1-201ENST00000431037 HDGFP51858 240 aaKnown RBP26.69■■□□□ 1.86
PMS2P1-201ENST00000431037 PHLPP1O60346 1717 aa26.68■■□□□ 1.86
PMS2P1-201ENST00000431037 UNC13BO14795 1591 aa26.68■■□□□ 1.86
PMS2P1-201ENST00000431037 RIMS2Q9UQ26 1411 aa26.67■■□□□ 1.86
PMS2P1-201ENST00000431037 RBM33Q96EV2 1170 aaKnown RBP26.67■■□□□ 1.86
PMS2P1-201ENST00000431037 PPP1R15AO75807 674 aaPredicted RBP26.66■■□□□ 1.86
PMS2P1-201ENST00000431037 NCOA3Q9Y6Q9 1424 aa26.65■■□□□ 1.86
PMS2P1-201ENST00000431037 FAM50AQ14320 339 aaKnown RBP26.65■■□□□ 1.86
PMS2P1-201ENST00000431037 SLAIN2Q9P270 581 aa26.65■■□□□ 1.86
PMS2P1-201ENST00000431037 DIP2AQ14689 1571 aa26.64■■□□□ 1.86
PMS2P1-201ENST00000431037 JCADQ9P266 1359 aa26.63■■□□□ 1.85
PMS2P1-201ENST00000431037 POTEAQ6S8J7 498 aa26.61■■□□□ 1.85
PMS2P1-201ENST00000431037 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.61■■□□□ 1.85
PMS2P1-201ENST00000431037 TBX22Q9Y458 520 aa26.6■■□□□ 1.85
PMS2P1-201ENST00000431037 COL16A1Q07092 1604 aaPredicted RBP26.59■■□□□ 1.85
PMS2P1-201ENST00000431037 E9PCH4 1651 aa26.59■■□□□ 1.85
PMS2P1-201ENST00000431037 PIK3R4Q99570 1358 aa26.58■■□□□ 1.84
PMS2P1-201ENST00000431037 IQGAP3Q86VI3 1631 aa26.57■■□□□ 1.84
PMS2P1-201ENST00000431037 ROCK1Q13464 1354 aa26.55■■□□□ 1.84
PMS2P1-201ENST00000431037 ADAMTS13Q76LX8 1427 aa26.54■■□□□ 1.84
PMS2P1-201ENST00000431037 TRPM2O94759 1503 aa26.52■■□□□ 1.84
PMS2P1-201ENST00000431037 AHDC1Q5TGY3 1603 aaPredicted RBP26.52■■□□□ 1.84
PMS2P1-201ENST00000431037 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.51■■□□□ 1.83
PMS2P1-201ENST00000431037 SPATA31A6Q5VVP1 1343 aa26.51■■□□□ 1.83
PMS2P1-201ENST00000431037 C14orf37Q86TY3 774 aa26.51■■□□□ 1.83
PMS2P1-201ENST00000431037 CADPS2Q86UW7 1296 aa26.51■■□□□ 1.83
PMS2P1-201ENST00000431037 CHGAP10645 457 aaKnown RBP26.5■■□□□ 1.83
PMS2P1-201ENST00000431037 C19orf44Q9H6X5 657 aa26.49■■□□□ 1.83
PMS2P1-201ENST00000431037 SHPRHQ149N8 1683 aa26.49■■□□□ 1.83
PMS2P1-201ENST00000431037 SETD1AO15047 1707 aaKnown RBP26.48■■□□□ 1.83
PMS2P1-201ENST00000431037 ATF3P18847 181 aa26.46■■□□□ 1.83
PMS2P1-201ENST00000431037 LRP6O75581 1613 aa26.45■■□□□ 1.82
PMS2P1-201ENST00000431037 DCCP43146 1447 aa26.45■■□□□ 1.82
PMS2P1-201ENST00000431037 NUP155O75694 1391 aa26.42■■□□□ 1.82
PMS2P1-201ENST00000431037 NUTM2DQ5VT03 806 aaPredicted RBP26.41■■□□□ 1.82
PMS2P1-201ENST00000431037 PPARGC1BQ86YN6 1023 aaKnown RBP26.41■■□□□ 1.82
PMS2P1-201ENST00000431037 XRN1Q8IZH2 1706 aaKnown RBP26.41■■□□□ 1.82
PMS2P1-201ENST00000431037 SETBP1Q9Y6X0 1596 aa26.41■■□□□ 1.82
PMS2P1-201ENST00000431037 MEX3CQ5U5Q3 659 aaKnown RBP26.4■■□□□ 1.82
PMS2P1-201ENST00000431037 ZNF772Q68DY9 489 aaPredicted RBP26.4■■□□□ 1.82
PMS2P1-201ENST00000431037 AMOTL2Q9Y2J4 779 aa26.38■■□□□ 1.81
PMS2P1-201ENST00000431037 SPHKAPQ2M3C7 1700 aa26.38■■□□□ 1.81
PMS2P1-201ENST00000431037 NRXN3Q9Y4C0 1643 aa26.38■■□□□ 1.81
PMS2P1-201ENST00000431037 PTPRUQ92729 1446 aa26.38■■□□□ 1.81
PMS2P1-201ENST00000431037 ASXL1Q8IXJ9 1541 aa26.34■■□□□ 1.81
PMS2P1-201ENST00000431037 BRINP3Q76B58 766 aa26.34■■□□□ 1.81
PMS2P1-201ENST00000431037 NHSL1Q5SYE7 1610 aa26.32■■□□□ 1.8
PMS2P1-201ENST00000431037 MST1RQ04912 1400 aa26.3■■□□□ 1.8
PMS2P1-201ENST00000431037 SETD5Q9C0A6 1442 aa26.3■■□□□ 1.8
PMS2P1-201ENST00000431037 CDK12Q9NYV4 1490 aaPredicted RBP26.29■■□□□ 1.8
PMS2P1-201ENST00000431037 ADGRL3Q9HAR2 1447 aa26.26■■□□□ 1.79
PMS2P1-201ENST00000431037 ITGAEP38570 1179 aa26.24■■□□□ 1.79
PMS2P1-201ENST00000431037 ZNF326Q5BKZ1 582 aaKnown RBP26.24■■□□□ 1.79
PMS2P1-201ENST00000431037 TRIM52Q96A61 297 aa26.24■■□□□ 1.79
PMS2P1-201ENST00000431037 NEXMIFQ5QGS0 1516 aa26.24■■□□□ 1.79
PMS2P1-201ENST00000431037 METP08581 1390 aa26.23■■□□□ 1.79
PMS2P1-201ENST00000431037 RXRBP28702 533 aa26.23■■□□□ 1.79
PMS2P1-201ENST00000431037 NALCNQ8IZF0 1738 aa26.22■■□□□ 1.79
PMS2P1-201ENST00000431037 CLTCL1P53675 1640 aa26.22■■□□□ 1.79
PMS2P1-201ENST00000431037 UPF1Q92900 1129 aaKnown RBP eCLIP26.22■■□□□ 1.79
PMS2P1-201ENST00000431037 NUTM2BA6NNL0 878 aaPredicted RBP26.21■■□□□ 1.79
PMS2P1-201ENST00000431037 NUTM2EB1AL46 878 aaPredicted RBP26.21■■□□□ 1.79
PMS2P1-201ENST00000431037 NUTM2AQ8IVF1 878 aaPredicted RBP26.21■■□□□ 1.79
PMS2P1-201ENST00000431037 LRRC59Q96AG4 307 aaKnown RBP26.21■■□□□ 1.79
PMS2P1-201ENST00000431037 KIF1BO60333 1816 aa26.18■■□□□ 1.78
PMS2P1-201ENST00000431037 AFF2P51816 1311 aa26.18■■□□□ 1.78
PMS2P1-201ENST00000431037 LAMC1P11047 1609 aa26.16■■□□□ 1.78
PMS2P1-201ENST00000431037 PTCH1Q13635 1447 aa26.15■■□□□ 1.78
PMS2P1-201ENST00000431037 PNPLA6Q8IY17 1366 aa26.15■■□□□ 1.78
PMS2P1-201ENST00000431037 PRAG1Q86YV5 1406 aa26.12■■□□□ 1.77
PMS2P1-201ENST00000431037 C1orf167Q5SNV9 1468 aa26.11■■□□□ 1.77
PMS2P1-201ENST00000431037 C8orf37Q96NL8 207 aa26.09■■□□□ 1.77
PMS2P1-201ENST00000431037 RGS12O14924 1447 aa26.08■■□□□ 1.77
PMS2P1-201ENST00000431037 NAIPQ13075 1403 aa26.07■■□□□ 1.76
PMS2P1-201ENST00000431037 VGFO15240 615 aaPredicted RBP26.07■■□□□ 1.76
PMS2P1-201ENST00000431037 RBM6P78332 1123 aaKnown RBP26.07■■□□□ 1.76
PMS2P1-201ENST00000431037 RRBP1Q9P2E9 1410 aaKnown RBP26.05■■□□□ 1.76
PMS2P1-201ENST00000431037 DDX17Q92841 729 aaKnown RBP26.05■■□□□ 1.76
PMS2P1-201ENST00000431037 QTRT2Q9H974 415 aaKnown RBP26.04■■□□□ 1.76
PMS2P1-201ENST00000431037 ROBO2Q9HCK4 1378 aa26.03■■□□□ 1.76
PMS2P1-201ENST00000431037 SOS2Q07890 1332 aaPredicted RBP26.02■■□□□ 1.76
PMS2P1-201ENST00000431037 RPGRIP1LQ68CZ1 1315 aa26.02■■□□□ 1.76
PMS2P1-201ENST00000431037 HFM1A2PYH4 1435 aa26.02■■□□□ 1.76
PMS2P1-201ENST00000431037 NGLY1Q96IV0 654 aa26.01■■□□□ 1.75
PMS2P1-201ENST00000431037 PPLO60437 1756 aa26■■□□□ 1.75
PMS2P1-201ENST00000431037 COL22A1Q8NFW1 1626 aaPredicted RBP25.99■■□□□ 1.75
PMS2P1-201ENST00000431037 CDC42BPGQ6DT37 1551 aa25.99■■□□□ 1.75
PMS2P1-201ENST00000431037 ADAMTS2O95450 1211 aa25.98■■□□□ 1.75
PMS2P1-201ENST00000431037 ORAI2Q96SN7 254 aa25.95■■□□□ 1.74
PMS2P1-201ENST00000431037 ATAD2Q6PL18 1390 aa25.95■■□□□ 1.74
PMS2P1-201ENST00000431037 USP21Q9UK80 565 aa25.92■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms