RNA–Protein interactions for RNA: ENST00000430710.7

CHD8-202, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD8, Length 7,420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-202ENST00000430710 STK31Q9BXU1 1019 aa7.57□□□□□ -1.2
CHD8-202ENST00000430710 CCDC18Q5T9S5 1454 aa7.57□□□□□ -1.2
CHD8-202ENST00000430710 NUP155O75694 1391 aa7.56□□□□□ -1.2
CHD8-202ENST00000430710 H3BQV1 296 aa7.56□□□□□ -1.2
CHD8-202ENST00000430710 IFFO2Q5TF58 517 aa7.56□□□□□ -1.2
CHD8-202ENST00000430710 CNTLNQ9NXG0 1405 aa7.56□□□□□ -1.2
CHD8-202ENST00000430710 WIZO95785 1651 aa7.56□□□□□ -1.2
CHD8-202ENST00000430710 C22orf23Q9BZE7 217 aa7.56□□□□□ -1.2
CHD8-202ENST00000430710 CLSTN1O94985 981 aa7.56□□□□□ -1.2
CHD8-202ENST00000430710 TAF3Q5VWG9 929 aa7.56□□□□□ -1.2
CHD8-202ENST00000430710 DNAJC5BQ9UF47 199 aa7.56□□□□□ -1.2
CHD8-202ENST00000430710 DDX19BQ9UMR2 479 aa7.56□□□□□ -1.2
CHD8-202ENST00000430710 MCTP1Q6DN14 999 aa7.55□□□□□ -1.2
CHD8-202ENST00000430710 FBXW7Q969H0 707 aa7.55□□□□□ -1.2
CHD8-202ENST00000430710 HOMER1Q86YM7 354 aa7.55□□□□□ -1.2
CHD8-202ENST00000430710 USP47Q96K76 1375 aa7.55□□□□□ -1.2
CHD8-202ENST00000430710 COG6Q9Y2V7 657 aa7.55□□□□□ -1.2
CHD8-202ENST00000430710 APPP05067 770 aa7.54□□□□□ -1.2
CHD8-202ENST00000430710 FAM184AQ8NB25 1140 aa7.54□□□□□ -1.2
CHD8-202ENST00000430710 IFT57Q9NWB7 429 aa7.54□□□□□ -1.2
CHD8-202ENST00000430710 LETM1O95202 739 aaPredicted RBP7.54□□□□□ -1.2
CHD8-202ENST00000430710 LTV1Q96GA3 475 aaPredicted RBP7.54□□□□□ -1.2
CHD8-202ENST00000430710 TOP2AP11388 1531 aaKnown RBP7.54□□□□□ -1.2
CHD8-202ENST00000430710 MBD3O95983 291 aa7.54□□□□□ -1.2
CHD8-202ENST00000430710 ATF3P18847 181 aa7.54□□□□□ -1.2
CHD8-202ENST00000430710 MROH2BQ7Z745 1585 aa7.54□□□□□ -1.2
CHD8-202ENST00000430710 FRAT2O75474 233 aaPredicted RBP7.53□□□□□ -1.2
CHD8-202ENST00000430710 TPD52L1Q16890 204 aaPredicted RBP7.53□□□□□ -1.2
CHD8-202ENST00000430710 HSP90B2PQ58FF3 399 aa7.53□□□□□ -1.2
CHD8-202ENST00000430710 SASS6Q6UVJ0 657 aa7.53□□□□□ -1.2
CHD8-202ENST00000430710 MNS1Q8NEH6 495 aa7.53□□□□□ -1.2
CHD8-202ENST00000430710 ROCK1Q13464 1354 aa7.53□□□□□ -1.2
CHD8-202ENST00000430710 AK7Q96M32 723 aa7.53□□□□□ -1.2
CHD8-202ENST00000430710 CWC22Q9HCG8 908 aaKnown RBP7.53□□□□□ -1.2
CHD8-202ENST00000430710 CCDC7Q96M83 1385 aa7.53□□□□□ -1.2
CHD8-202ENST00000430710 INTS3Q68E01 1043 aaKnown RBP7.52□□□□□ -1.2
CHD8-202ENST00000430710 BACH2Q9BYV9 841 aa7.52□□□□□ -1.2
CHD8-202ENST00000430710 FOXD4L6Q3SYB3 417 aaPredicted RBP7.52□□□□□ -1.21
CHD8-202ENST00000430710 FOXD4L3Q6VB84 417 aaPredicted RBP7.52□□□□□ -1.21
CHD8-202ENST00000430710 UBE2Q2Q8WVN8 375 aa7.52□□□□□ -1.21
CHD8-202ENST00000430710 PANK3Q9H999 370 aa7.52□□□□□ -1.21
CHD8-202ENST00000430710 RILPL2Q969X0 211 aa7.52□□□□□ -1.21
CHD8-202ENST00000430710 RAPGEF2Q9Y4G8 1499 aa7.52□□□□□ -1.21
CHD8-202ENST00000430710 ST20-MTHFSA0A0A6YYL1 179 aa7.52□□□□□ -1.21
CHD8-202ENST00000430710 RUFY2Q8WXA3 655 aa7.52□□□□□ -1.21
CHD8-202ENST00000430710 TERF2IPQ9NYB0 399 aa7.52□□□□□ -1.21
CHD8-202ENST00000430710 BRD4O60885 1362 aaPredicted RBP7.52□□□□□ -1.21
CHD8-202ENST00000430710 IPO7O95373 1038 aaKnown RBP7.51□□□□□ -1.21
CHD8-202ENST00000430710 SLC4A10Q6U841 1118 aa7.51□□□□□ -1.21
CHD8-202ENST00000430710 GRPEL1Q9HAV7 217 aa7.51□□□□□ -1.21
CHD8-202ENST00000430710 HOOK1Q9UJC3 728 aaKnown RBP7.51□□□□□ -1.21
CHD8-202ENST00000430710 ESPNB1AK53 854 aa7.51□□□□□ -1.21
CHD8-202ENST00000430710 GTF2E1P29083 439 aaPredicted RBP7.51□□□□□ -1.21
CHD8-202ENST00000430710 UBAP1LF5GYI3 381 aa7.51□□□□□ -1.21
CHD8-202ENST00000430710 RBM10P98175 930 aaKnown RBP7.51□□□□□ -1.21
CHD8-202ENST00000430710 CREBRFQ8IUR6 639 aa7.51□□□□□ -1.21
CHD8-202ENST00000430710 DZIP1LQ8IYY4 767 aaKnown RBP7.51□□□□□ -1.21
CHD8-202ENST00000430710 RUFY1Q96T51 708 aa7.51□□□□□ -1.21
CHD8-202ENST00000430710 WASHC2AQ641Q2 1341 aa7.5□□□□□ -1.21
CHD8-202ENST00000430710 WASHC2CQ9Y4E1 1318 aa7.5□□□□□ -1.21
CHD8-202ENST00000430710 EFCAB2Q5VUJ9 269 aa7.5□□□□□ -1.21
CHD8-202ENST00000430710 RASSF8Q8NHQ8 419 aa7.5□□□□□ -1.21
CHD8-202ENST00000430710 BICD2Q8TD16 824 aa7.5□□□□□ -1.21
CHD8-202ENST00000430710 CEP89Q96ST8 783 aa7.5□□□□□ -1.21
CHD8-202ENST00000430710 RDXP35241 583 aaKnown RBP7.5□□□□□ -1.21
CHD8-202ENST00000430710 CDR1P51861 262 aa7.5□□□□□ -1.21
CHD8-202ENST00000430710 ERCC4Q92889 916 aaPredicted RBP7.5□□□□□ -1.21
CHD8-202ENST00000430710 WWC3Q9ULE0 1092 aa7.5□□□□□ -1.21
CHD8-202ENST00000430710 UQCRHLA0A096LP55 91 aa7.5□□□□□ -1.21
CHD8-202ENST00000430710 UQCRHP07919 91 aa7.5□□□□□ -1.21
CHD8-202ENST00000430710 ANKRD20A12PQ8NF67 263 aa7.5□□□□□ -1.21
CHD8-202ENST00000430710 BCL2L13Q9BXK5 485 aa7.5□□□□□ -1.21
CHD8-202ENST00000430710 TSPY26PQ9H489 355 aa7.5□□□□□ -1.21
CHD8-202ENST00000430710 CAVIN1Q6NZI2 390 aaKnown RBP7.5□□□□□ -1.21
CHD8-202ENST00000430710 NAT10Q9H0A0 1025 aaKnown RBP7.5□□□□□ -1.21
CHD8-202ENST00000430710 ZKSCAN1P17029 563 aaPredicted RBP7.5□□□□□ -1.21
CHD8-202ENST00000430710 LEKR1Q6ZMV7 388 aa7.5□□□□□ -1.21
CHD8-202ENST00000430710 C16orf71Q8IYS4 520 aaPredicted RBP7.5□□□□□ -1.21
CHD8-202ENST00000430710 SMC3Q9UQE7 1217 aa7.49□□□□□ -1.21
CHD8-202ENST00000430710 CARMIL2Q6F5E8 1435 aa7.49□□□□□ -1.21
CHD8-202ENST00000430710 CCP110O43303 1012 aa7.49□□□□□ -1.21
CHD8-202ENST00000430710 GORABQ5T7V8 394 aa7.49□□□□□ -1.21
CHD8-202ENST00000430710 PES1O00541 588 aaKnown RBP7.49□□□□□ -1.21
CHD8-202ENST00000430710 PDS5BQ9NTI5 1447 aa7.49□□□□□ -1.21
CHD8-202ENST00000430710 MCM2P49736 904 aa7.49□□□□□ -1.21
CHD8-202ENST00000430710 DHX8Q14562 1220 aaKnown RBP7.49□□□□□ -1.21
CHD8-202ENST00000430710 CCDC144AA2RUR9 1427 aa7.49□□□□□ -1.21
CHD8-202ENST00000430710 MAPK8IP2Q13387 824 aaPredicted RBP7.49□□□□□ -1.21
CHD8-202ENST00000430710 SMG6Q86US8 1419 aaKnown RBP7.48□□□□□ -1.21
CHD8-202ENST00000430710 PDCL3Q9H2J4 239 aa7.48□□□□□ -1.21
CHD8-202ENST00000430710 APAF1O14727 1248 aa7.48□□□□□ -1.21
CHD8-202ENST00000430710 ADAMTS2O95450 1211 aa7.48□□□□□ -1.21
CHD8-202ENST00000430710 RRP7AQ9Y3A4 280 aaKnown RBP7.48□□□□□ -1.21
CHD8-202ENST00000430710 CUX1P39880 1505 aa7.48□□□□□ -1.21
CHD8-202ENST00000430710 NGDNQ8NEJ9 315 aaKnown RBP7.48□□□□□ -1.21
CHD8-202ENST00000430710 UACAQ9BZF9 1416 aa7.48□□□□□ -1.21
CHD8-202ENST00000430710 H0YHG0 523 aa7.48□□□□□ -1.21
CHD8-202ENST00000430710 RNF20Q5VTR2 975 aa7.47□□□□□ -1.21
CHD8-202ENST00000430710 CPLX2Q6PUV4 134 aaKnown RBP7.47□□□□□ -1.21
CHD8-202ENST00000430710 PDCL2Q8N4E4 241 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms