RNA–Protein interactions for RNA: ENST00000430570.5

CPNE1-212, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-212ENST00000430570 ZNF326Q5BKZ1 582 aaKnown RBP36.88■■■■□ 3.49
CPNE1-212ENST00000430570 DHX57Q6P158 1386 aaKnown RBP36.88■■■■□ 3.49
CPNE1-212ENST00000430570 NUTM2DQ5VT03 806 aaPredicted RBP36.87■■■■□ 3.49
CPNE1-212ENST00000430570 MED14O60244 1454 aa36.86■■■■□ 3.49
CPNE1-212ENST00000430570 NPHP4O75161 1426 aaPredicted RBP36.85■■■■□ 3.49
CPNE1-212ENST00000430570 SPATA31E1Q6ZUB1 1445 aa36.82■■■■□ 3.48
CPNE1-212ENST00000430570 HDGFP51858 240 aaKnown RBP36.81■■■■□ 3.48
CPNE1-212ENST00000430570 RGL3Q3MIN7 710 aa36.8■■■■□ 3.48
CPNE1-212ENST00000430570 ABCF1Q8NE71 845 aaKnown RBP eCLIP36.8■■■■□ 3.48
CPNE1-212ENST00000430570 SENP3Q9H4L4 574 aaPredicted RBP36.79■■■■□ 3.48
CPNE1-212ENST00000430570 IQGAP1P46940 1657 aa36.78■■■■□ 3.48
CPNE1-212ENST00000430570 PPP1R15AO75807 674 aaPredicted RBP36.77■■■■□ 3.48
CPNE1-212ENST00000430570 NEXMIFQ5QGS0 1516 aa36.77■■■■□ 3.48
CPNE1-212ENST00000430570 PLEKHG1Q9ULL1 1385 aa36.72■■■■□ 3.47
CPNE1-212ENST00000430570 RPGRIP1LQ68CZ1 1315 aa36.71■■■■□ 3.47
CPNE1-212ENST00000430570 BCANQ96GW7 911 aa36.69■■■■□ 3.46
CPNE1-212ENST00000430570 SLC26A8Q96RN1 970 aa36.67■■■■□ 3.46
CPNE1-212ENST00000430570 SIN3AQ96ST3 1273 aa36.67■■■■□ 3.46
CPNE1-212ENST00000430570 PPLO60437 1756 aa36.65■■■■□ 3.46
CPNE1-212ENST00000430570 ZNF335Q9H4Z2 1342 aaPredicted RBP36.64■■■■□ 3.46
CPNE1-212ENST00000430570 VGFO15240 615 aaPredicted RBP36.62■■■■□ 3.45
CPNE1-212ENST00000430570 IFT172Q9UG01 1749 aa36.6■■■■□ 3.45
CPNE1-212ENST00000430570 ADAMTS13Q76LX8 1427 aa36.6■■■■□ 3.45
CPNE1-212ENST00000430570 ADGRF5Q8IZF2 1346 aa36.58■■■■□ 3.45
CPNE1-212ENST00000430570 NEUROD1Q13562 356 aa36.57■■■■□ 3.44
CPNE1-212ENST00000430570 NRXN3Q9Y4C0 1643 aa36.57■■■■□ 3.44
CPNE1-212ENST00000430570 TBX22Q9Y458 520 aa36.55■■■■□ 3.44
CPNE1-212ENST00000430570 SETBP1Q9Y6X0 1596 aa36.54■■■■□ 3.44
CPNE1-212ENST00000430570 LTBP4Q8N2S1 1624 aa36.53■■■■□ 3.44
CPNE1-212ENST00000430570 DCAF11Q8TEB1 546 aa36.5■■■■□ 3.43
CPNE1-212ENST00000430570 KDM2AQ9Y2K7 1162 aa36.49■■■■□ 3.43
CPNE1-212ENST00000430570 STRCP1A6NGW2 1772 aa36.48■■■■□ 3.43
CPNE1-212ENST00000430570 MYOM2P54296 1465 aa36.46■■■■□ 3.43
CPNE1-212ENST00000430570 DIP2AQ14689 1571 aa36.46■■■■□ 3.43
CPNE1-212ENST00000430570 KCNA6P17658 529 aa36.43■■■■□ 3.42
CPNE1-212ENST00000430570 NRXN1Q9ULB1 1477 aa36.42■■■■□ 3.42
CPNE1-212ENST00000430570 ALKQ9UM73 1620 aa36.42■■■■□ 3.42
CPNE1-212ENST00000430570 METP08581 1390 aa36.41■■■■□ 3.42
CPNE1-212ENST00000430570 PIK3C2GO75747 1445 aa36.41■■■■□ 3.42
CPNE1-212ENST00000430570 L3MBTL2Q969R5 705 aa36.4■■■■□ 3.42
CPNE1-212ENST00000430570 SETD1AO15047 1707 aaKnown RBP36.39■■■■□ 3.42
CPNE1-212ENST00000430570 PTPRUQ92729 1446 aa36.38■■■■□ 3.42
CPNE1-212ENST00000430570 CERKQ8TCT0 537 aa36.38■■■■□ 3.41
CPNE1-212ENST00000430570 CHD2O14647 1828 aaKnown RBP36.38■■■■□ 3.41
CPNE1-212ENST00000430570 PIK3R4Q99570 1358 aa36.37■■■■□ 3.41
CPNE1-212ENST00000430570 CPS1P31327 1500 aa36.36■■■■□ 3.41
CPNE1-212ENST00000430570 STAC3Q96MF2 364 aa36.35■■■■□ 3.41
CPNE1-212ENST00000430570 NWD1Q149M9 1564 aa36.34■■■■□ 3.41
CPNE1-212ENST00000430570 CFAP70Q5T0N1 1121 aa36.34■■■■□ 3.41
CPNE1-212ENST00000430570 CCER1Q8TC90 406 aaPredicted RBP36.34■■■■□ 3.41
CPNE1-212ENST00000430570 C14orf93Q9H972 538 aaKnown RBP36.34■■■■□ 3.41
CPNE1-212ENST00000430570 AMOTL2Q9Y2J4 779 aa36.33■■■■□ 3.41
CPNE1-212ENST00000430570 LRRC7Q96NW7 1537 aa36.3■■■■□ 3.4
CPNE1-212ENST00000430570 CLSPNQ9HAW4 1339 aa36.29■■■■□ 3.4
CPNE1-212ENST00000430570 TMEM132EQ6IEE7 984 aa36.28■■■■□ 3.4
CPNE1-212ENST00000430570 ASXL1Q8IXJ9 1541 aa36.26■■■■□ 3.4
CPNE1-212ENST00000430570 RBM33Q96EV2 1170 aaKnown RBP36.26■■■■□ 3.39
CPNE1-212ENST00000430570 PROSER2Q86WR7 435 aaPredicted RBP36.25■■■■□ 3.39
CPNE1-212ENST00000430570 NKTRP30414 1462 aaKnown RBP36.24■■■■□ 3.39
CPNE1-212ENST00000430570 TONSLQ96HA7 1378 aa36.24■■■■□ 3.39
CPNE1-212ENST00000430570 XRN1Q8IZH2 1706 aaKnown RBP36.23■■■■□ 3.39
CPNE1-212ENST00000430570 PRAG1Q86YV5 1406 aa36.22■■■■□ 3.39
CPNE1-212ENST00000430570 LAMC1P11047 1609 aa36.2■■■■□ 3.38
CPNE1-212ENST00000430570 TMEM94Q12767 1356 aa36.19■■■■□ 3.38
CPNE1-212ENST00000430570 XIRP1Q702N8 1843 aaKnown RBP36.19■■■■□ 3.38
CPNE1-212ENST00000430570 STK26Q9P289 416 aa36.17■■■■□ 3.38
CPNE1-212ENST00000430570 IQSEC2Q5JU85 1478 aa36.16■■■■□ 3.38
CPNE1-212ENST00000430570 LRPPRCP42704 1394 aaKnown RBP36.15■■■■□ 3.38
CPNE1-212ENST00000430570 YTHDC2Q9H6S0 1430 aaKnown RBP36.14■■■■□ 3.38
CPNE1-212ENST00000430570 ADGRB1O14514 1584 aa36.13■■■■□ 3.37
CPNE1-212ENST00000430570 NBPF8Q3BBV2 869 aa36.12■■■■□ 3.37
CPNE1-212ENST00000430570 ROBO2Q9HCK4 1378 aa36.12■■■■□ 3.37
CPNE1-212ENST00000430570 NBPF1Q3BBV0 1214 aa36.1■■■■□ 3.37
CPNE1-212ENST00000430570 ABCC11Q96J66 1382 aa36.09■■■■□ 3.37
CPNE1-212ENST00000430570 PTCH1Q13635 1447 aa36.07■■■■□ 3.37
CPNE1-212ENST00000430570 KIAA1210Q9ULL0 1709 aa36.07■■■■□ 3.37
CPNE1-212ENST00000430570 TECPR2O15040 1411 aa36.06■■■■□ 3.36
CPNE1-212ENST00000430570 NCOA3Q9Y6Q9 1424 aa36.03■■■■□ 3.36
CPNE1-212ENST00000430570 KNDC1Q76NI1 1749 aa36.03■■■■□ 3.36
CPNE1-212ENST00000430570 WAPLQ7Z5K2 1190 aa36.03■■■■□ 3.36
CPNE1-212ENST00000430570 TRAK1Q9UPV9 953 aa36.02■■■■□ 3.36
CPNE1-212ENST00000430570 C14orf37Q86TY3 774 aa36.01■■■■□ 3.35
CPNE1-212ENST00000430570 TIMELESSQ9UNS1 1208 aa36.01■■■■□ 3.35
CPNE1-212ENST00000430570 TRPM1Q7Z4N2 1603 aa36.01■■■■□ 3.35
CPNE1-212ENST00000430570 UBAP1LF5GYI3 381 aa36■■■■□ 3.35
CPNE1-212ENST00000430570 PLEKHH1Q9ULM0 1364 aa35.99■■■■□ 3.35
CPNE1-212ENST00000430570 SIRT1Q96EB6 747 aa35.98■■■■□ 3.35
CPNE1-212ENST00000430570 MSH6P52701 1360 aa35.97■■■■□ 3.35
CPNE1-212ENST00000430570 FBXO41Q8TF61 875 aa35.95■■■■□ 3.35
CPNE1-212ENST00000430570 C19orf44Q9H6X5 657 aa35.95■■■■□ 3.35
CPNE1-212ENST00000430570 DLC1Q96QB1 1528 aa35.94■■■■□ 3.34
CPNE1-212ENST00000430570 FAM135BQ49AJ0 1406 aa35.94■■■■□ 3.34
CPNE1-212ENST00000430570 TOM1O60784 492 aa35.93■■■■□ 3.34
CPNE1-212ENST00000430570 PRAM1Q96QH2 718 aa35.92■■■■□ 3.34
CPNE1-212ENST00000430570 SIPA1L2Q9P2F8 1722 aaPredicted RBP35.92■■■■□ 3.34
CPNE1-212ENST00000430570 ADGRL3Q9HAR2 1447 aa35.91■■■■□ 3.34
CPNE1-212ENST00000430570 NALCNQ8IZF0 1738 aa35.91■■■■□ 3.34
CPNE1-212ENST00000430570 ROCK2O75116 1388 aaKnown RBP35.91■■■■□ 3.34
CPNE1-212ENST00000430570 SAFB2Q14151 953 aaKnown RBP eCLIP35.89■■■■□ 3.343e-13■□□□□ 9.1
CPNE1-212ENST00000430570 POGKQ9P215 609 aa35.87■■■■□ 3.33
Retrieved 100 of 20,778 RNA–protein pairs in 139.5 ms