RNA–Protein interactions for RNA: ENST00000430408.1

CNOT10-204, Transcript of CCR4-NOT transcription complex subunit 10, humanhuman

TSL 3

Gene CNOT10, Length 687 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT10-204ENST00000430408 FBXO41Q8TF61 875 aa11.22□□□□□ -0.61
CNOT10-204ENST00000430408 TMEM2Q9UHN6 1383 aa11.22□□□□□ -0.61
CNOT10-204ENST00000430408 STAG3Q9UJ98 1225 aa11.22□□□□□ -0.61
CNOT10-204ENST00000430408 SCAF11Q99590 1463 aaKnown RBP11.21□□□□□ -0.61
CNOT10-204ENST00000430408 ZNF219Q9P2Y4 722 aaPredicted RBP11.21□□□□□ -0.61
CNOT10-204ENST00000430408 EID1Q9Y6B2 187 aa11.21□□□□□ -0.61
CNOT10-204ENST00000430408 LTBP4Q8N2S1 1624 aa11.2□□□□□ -0.62
CNOT10-204ENST00000430408 ADGRB3O60242 1522 aa11.2□□□□□ -0.62
CNOT10-204ENST00000430408 IQSEC2Q5JU85 1478 aa11.2□□□□□ -0.62
CNOT10-204ENST00000430408 TXNDC2Q86VQ3 553 aa11.2□□□□□ -0.62
CNOT10-204ENST00000430408 RBM42Q9BTD8 480 aaKnown RBP11.2□□□□□ -0.62
CNOT10-204ENST00000430408 HDGFP51858 240 aaKnown RBP11.19□□□□□ -0.62
CNOT10-204ENST00000430408 ILDR1Q86SU0 546 aaPredicted RBP11.19□□□□□ -0.62
CNOT10-204ENST00000430408 LTKP29376 864 aa11.18□□□□□ -0.62
CNOT10-204ENST00000430408 IQGAP1P46940 1657 aa11.17□□□□□ -0.62
CNOT10-204ENST00000430408 ZNF335Q9H4Z2 1342 aaPredicted RBP11.17□□□□□ -0.62
CNOT10-204ENST00000430408 TRIM52Q96A61 297 aa11.17□□□□□ -0.62
CNOT10-204ENST00000430408 TMEM131LA2VDJ0 1609 aa11.17□□□□□ -0.62
CNOT10-204ENST00000430408 CPS1P31327 1500 aa11.16□□□□□ -0.62
CNOT10-204ENST00000430408 SETD5Q9C0A6 1442 aa11.16□□□□□ -0.62
CNOT10-204ENST00000430408 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.15□□□□□ -0.62
CNOT10-204ENST00000430408 SLC4A1APQ9BWU0 796 aaKnown RBP11.15□□□□□ -0.62
CNOT10-204ENST00000430408 ZFYVE9O95405 1425 aa11.15□□□□□ -0.62
CNOT10-204ENST00000430408 SPHKAPQ2M3C7 1700 aa11.15□□□□□ -0.63
CNOT10-204ENST00000430408 TRPM2O94759 1503 aa11.14□□□□□ -0.63
CNOT10-204ENST00000430408 RIMS2Q9UQ26 1411 aa11.13□□□□□ -0.63
CNOT10-204ENST00000430408 HRCP23327 699 aa11.13□□□□□ -0.63
CNOT10-204ENST00000430408 PLEKHG1Q9ULL1 1385 aa11.13□□□□□ -0.63
CNOT10-204ENST00000430408 CHGAP10645 457 aaKnown RBP11.12□□□□□ -0.63
CNOT10-204ENST00000430408 MPHOSPH9Q99550 1183 aa11.11□□□□□ -0.63
CNOT10-204ENST00000430408 ABCB7O75027 752 aa11.1□□□□□ -0.63
CNOT10-204ENST00000430408 PPP1R15AO75807 674 aaPredicted RBP11.1□□□□□ -0.63
CNOT10-204ENST00000430408 CHRDL2Q6WN34 429 aa11.1□□□□□ -0.63
CNOT10-204ENST00000430408 MYO5BQ9ULV0 1848 aa11.09□□□□□ -0.63
CNOT10-204ENST00000430408 RAB3GAP2Q9H2M9 1393 aa11.09□□□□□ -0.63
CNOT10-204ENST00000430408 TBX22Q9Y458 520 aa11.09□□□□□ -0.63
CNOT10-204ENST00000430408 CLTCL1P53675 1640 aa11.09□□□□□ -0.63
CNOT10-204ENST00000430408 KCNA6P17658 529 aa11.08□□□□□ -0.64
CNOT10-204ENST00000430408 RPGRIP1LQ68CZ1 1315 aa11.08□□□□□ -0.64
CNOT10-204ENST00000430408 SLC26A8Q96RN1 970 aa11.07□□□□□ -0.64
CNOT10-204ENST00000430408 LRRC7Q96NW7 1537 aa11.07□□□□□ -0.64
CNOT10-204ENST00000430408 DIP2AQ14689 1571 aa11.07□□□□□ -0.64
CNOT10-204ENST00000430408 PIK3R4Q99570 1358 aa11.06□□□□□ -0.64
CNOT10-204ENST00000430408 ZNF326Q5BKZ1 582 aaKnown RBP11.06□□□□□ -0.64
CNOT10-204ENST00000430408 BCANQ96GW7 911 aa11.06□□□□□ -0.64
CNOT10-204ENST00000430408 KIF1BO60333 1816 aa11.06□□□□□ -0.64
CNOT10-204ENST00000430408 CCDC144AA2RUR9 1427 aa11.06□□□□□ -0.64
CNOT10-204ENST00000430408 STRCP1A6NGW2 1772 aa11.05□□□□□ -0.64
CNOT10-204ENST00000430408 VGFO15240 615 aaPredicted RBP11.05□□□□□ -0.64
CNOT10-204ENST00000430408 TOM1O60784 492 aa11.05□□□□□ -0.64
CNOT10-204ENST00000430408 NWD1Q149M9 1564 aa11.05□□□□□ -0.64
CNOT10-204ENST00000430408 ADAMTS13Q76LX8 1427 aa11.05□□□□□ -0.64
CNOT10-204ENST00000430408 NKTRP30414 1462 aaKnown RBP11.05□□□□□ -0.64
CNOT10-204ENST00000430408 SETBP1Q9Y6X0 1596 aa11.04□□□□□ -0.64
CNOT10-204ENST00000430408 UBAP1LF5GYI3 381 aa11.04□□□□□ -0.64
CNOT10-204ENST00000430408 SP7Q8TDD2 431 aaPredicted RBP11.04□□□□□ -0.64
CNOT10-204ENST00000430408 NEXMIFQ5QGS0 1516 aa11.04□□□□□ -0.64
CNOT10-204ENST00000430408 NUTM2DQ5VT03 806 aaPredicted RBP11.03□□□□□ -0.64
CNOT10-204ENST00000430408 SPATA31E1Q6ZUB1 1445 aa11.01□□□□□ -0.65
CNOT10-204ENST00000430408 NCOA3Q9Y6Q9 1424 aa11.01□□□□□ -0.65
CNOT10-204ENST00000430408 CHD2O14647 1828 aaKnown RBP11.01□□□□□ -0.65
CNOT10-204ENST00000430408 PROSER2Q86WR7 435 aaPredicted RBP11.01□□□□□ -0.65
CNOT10-204ENST00000430408 TMEM94Q12767 1356 aa11.01□□□□□ -0.65
CNOT10-204ENST00000430408 ANKRD30BQ9BXX2 1392 aa11□□□□□ -0.65
CNOT10-204ENST00000430408 NRXN3Q9Y4C0 1643 aa10.99□□□□□ -0.65
CNOT10-204ENST00000430408 AMOTL2Q9Y2J4 779 aa10.98□□□□□ -0.65
CNOT10-204ENST00000430408 PPLO60437 1756 aa10.98□□□□□ -0.65
CNOT10-204ENST00000430408 ALKQ9UM73 1620 aa10.97□□□□□ -0.65
CNOT10-204ENST00000430408 XIRP1Q702N8 1843 aaKnown RBP10.97□□□□□ -0.65
CNOT10-204ENST00000430408 PTPRUQ92729 1446 aa10.96□□□□□ -0.65
CNOT10-204ENST00000430408 METP08581 1390 aa10.96□□□□□ -0.65
CNOT10-204ENST00000430408 MSH6P52701 1360 aa10.96□□□□□ -0.65
CNOT10-204ENST00000430408 RGL3Q3MIN7 710 aa10.96□□□□□ -0.65
CNOT10-204ENST00000430408 STAC3Q96MF2 364 aa10.96□□□□□ -0.65
CNOT10-204ENST00000430408 XRN1Q8IZH2 1706 aaKnown RBP10.95□□□□□ -0.66
CNOT10-204ENST00000430408 PRAG1Q86YV5 1406 aa10.95□□□□□ -0.66
CNOT10-204ENST00000430408 PIP4K2BP78356 416 aa10.95□□□□□ -0.66
CNOT10-204ENST00000430408 FAM135BQ49AJ0 1406 aa10.94□□□□□ -0.66
CNOT10-204ENST00000430408 C19orf44Q9H6X5 657 aa10.94□□□□□ -0.66
CNOT10-204ENST00000430408 IFT172Q9UG01 1749 aa10.94□□□□□ -0.66
CNOT10-204ENST00000430408 MYOM2P54296 1465 aa10.93□□□□□ -0.66
CNOT10-204ENST00000430408 ADGRF5Q8IZF2 1346 aa10.93□□□□□ -0.66
CNOT10-204ENST00000430408 SAMD1Q6SPF0 538 aaPredicted RBP10.93□□□□□ -0.66
CNOT10-204ENST00000430408 NRXN1Q9ULB1 1477 aa10.93□□□□□ -0.66
CNOT10-204ENST00000430408 PIK3C2GO75747 1445 aa10.92□□□□□ -0.66
CNOT10-204ENST00000430408 DCCP43146 1447 aa10.92□□□□□ -0.66
CNOT10-204ENST00000430408 PTCH1Q13635 1447 aa10.92□□□□□ -0.66
CNOT10-204ENST00000430408 SETD1AO15047 1707 aaKnown RBP10.92□□□□□ -0.66
CNOT10-204ENST00000430408 TRIM26Q12899 539 aaPredicted RBP10.92□□□□□ -0.66
CNOT10-204ENST00000430408 CADPS2Q86UW7 1296 aa10.92□□□□□ -0.66
CNOT10-204ENST00000430408 HSPA1LP34931 641 aa10.91□□□□□ -0.66
CNOT10-204ENST00000430408 C14orf37Q86TY3 774 aa10.91□□□□□ -0.66
CNOT10-204ENST00000430408 RBM33Q96EV2 1170 aaKnown RBP10.91□□□□□ -0.66
CNOT10-204ENST00000430408 SLAIN2Q9P270 581 aa10.91□□□□□ -0.66
CNOT10-204ENST00000430408 ATF3P18847 181 aa10.9□□□□□ -0.66
CNOT10-204ENST00000430408 C14orf93Q9H972 538 aaKnown RBP10.9□□□□□ -0.66
CNOT10-204ENST00000430408 SLC4A2P04920 1241 aa10.89□□□□□ -0.67
CNOT10-204ENST00000430408 TECPR2O15040 1411 aa10.89□□□□□ -0.67
CNOT10-204ENST00000430408 ADGRL3Q9HAR2 1447 aa10.89□□□□□ -0.67
CNOT10-204ENST00000430408 LRPPRCP42704 1394 aaKnown RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms