RNA–Protein interactions for RNA: ENST00000430293.1

POLR1B-206, Transcript of RNA polymerase I subunit B, humanhuman

TSL 4

Gene POLR1B, Length 595 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-206ENST00000430293 TXNDC2Q86VQ3 553 aa18.91■□□□□ 0.62
POLR1B-206ENST00000430293 NAIPQ13075 1403 aa18.91■□□□□ 0.62
POLR1B-206ENST00000430293 SENP3Q9H4L4 574 aaPredicted RBP18.9■□□□□ 0.62
POLR1B-206ENST00000430293 SLC52A1Q9NWF4 448 aa18.9■□□□□ 0.62
POLR1B-206ENST00000430293 NUP155O75694 1391 aa18.89■□□□□ 0.61
POLR1B-206ENST00000430293 SPHKAPQ2M3C7 1700 aa18.87■□□□□ 0.61
POLR1B-206ENST00000430293 STAG3Q9UJ98 1225 aa18.86■□□□□ 0.61
POLR1B-206ENST00000430293 NWD1Q149M9 1564 aa18.85■□□□□ 0.61
POLR1B-206ENST00000430293 HFM1A2PYH4 1435 aa18.85■□□□□ 0.61
POLR1B-206ENST00000430293 EID1Q9Y6B2 187 aa18.85■□□□□ 0.61
POLR1B-206ENST00000430293 FAM135BQ49AJ0 1406 aa18.84■□□□□ 0.61
POLR1B-206ENST00000430293 POTEAQ6S8J7 498 aa18.84■□□□□ 0.61
POLR1B-206ENST00000430293 SETD1AO15047 1707 aaKnown RBP18.83■□□□□ 0.61
POLR1B-206ENST00000430293 RIMS2Q9UQ26 1411 aa18.83■□□□□ 0.6
POLR1B-206ENST00000430293 ROBO1Q9Y6N7 1651 aa18.82■□□□□ 0.6
POLR1B-206ENST00000430293 PLEKHG1Q9ULL1 1385 aa18.81■□□□□ 0.6
POLR1B-206ENST00000430293 CLTCL1P53675 1640 aa18.79■□□□□ 0.6
POLR1B-206ENST00000430293 TRPM2O94759 1503 aa18.79■□□□□ 0.6
POLR1B-206ENST00000430293 SLC26A8Q96RN1 970 aa18.78■□□□□ 0.6
POLR1B-206ENST00000430293 SRCAPQ6ZRS2 3230 aa18.77■□□□□ 0.6
POLR1B-206ENST00000430293 NKTRP30414 1462 aaKnown RBP18.77■□□□□ 0.59
POLR1B-206ENST00000430293 ADAMTS13Q76LX8 1427 aa18.76■□□□□ 0.59
POLR1B-206ENST00000430293 NRXN3Q9Y4C0 1643 aa18.76■□□□□ 0.59
POLR1B-206ENST00000430293 CHD2O14647 1828 aaKnown RBP18.75■□□□□ 0.59
POLR1B-206ENST00000430293 DIP2AQ14689 1571 aa18.74■□□□□ 0.59
POLR1B-206ENST00000430293 TMEM94Q12767 1356 aa18.73■□□□□ 0.59
POLR1B-206ENST00000430293 KCNA6P17658 529 aa18.73■□□□□ 0.59
POLR1B-206ENST00000430293 NEXMIFQ5QGS0 1516 aa18.71■□□□□ 0.59
POLR1B-206ENST00000430293 CHGAP10645 457 aaKnown RBP18.71■□□□□ 0.59
POLR1B-206ENST00000430293 PHLPP1O60346 1717 aa18.7■□□□□ 0.58
POLR1B-206ENST00000430293 NUTM2DQ5VT03 806 aaPredicted RBP18.7■□□□□ 0.58
POLR1B-206ENST00000430293 SETBP1Q9Y6X0 1596 aa18.7■□□□□ 0.58
POLR1B-206ENST00000430293 PPP1R15AO75807 674 aaPredicted RBP18.69■□□□□ 0.58
POLR1B-206ENST00000430293 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.68■□□□□ 0.58
POLR1B-206ENST00000430293 KIF1BO60333 1816 aa18.67■□□□□ 0.58
POLR1B-206ENST00000430293 COL16A1Q07092 1604 aaPredicted RBP18.67■□□□□ 0.58
POLR1B-206ENST00000430293 RBM33Q96EV2 1170 aaKnown RBP18.66■□□□□ 0.58
POLR1B-206ENST00000430293 TBX22Q9Y458 520 aa18.66■□□□□ 0.58
POLR1B-206ENST00000430293 XRN1Q8IZH2 1706 aaKnown RBP18.66■□□□□ 0.58
POLR1B-206ENST00000430293 PTPRUQ92729 1446 aa18.66■□□□□ 0.58
POLR1B-206ENST00000430293 HDGFP51858 240 aaKnown RBP18.65■□□□□ 0.58
POLR1B-206ENST00000430293 BCANQ96GW7 911 aa18.64■□□□□ 0.57
POLR1B-206ENST00000430293 PIK3R4Q99570 1358 aa18.64■□□□□ 0.57
POLR1B-206ENST00000430293 LRP6O75581 1613 aa18.63■□□□□ 0.57
POLR1B-206ENST00000430293 TRIM52Q96A61 297 aa18.62■□□□□ 0.57
POLR1B-206ENST00000430293 PROSER2Q86WR7 435 aaPredicted RBP18.61■□□□□ 0.57
POLR1B-206ENST00000430293 JCADQ9P266 1359 aa18.6■□□□□ 0.57
POLR1B-206ENST00000430293 SLC4A1APQ9BWU0 796 aaKnown RBP18.6■□□□□ 0.57
POLR1B-206ENST00000430293 PPLO60437 1756 aa18.6■□□□□ 0.57
POLR1B-206ENST00000430293 NCOA3Q9Y6Q9 1424 aa18.58■□□□□ 0.57
POLR1B-206ENST00000430293 FOXD1Q16676 465 aa18.58■□□□□ 0.56
POLR1B-206ENST00000430293 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.57■□□□□ 0.56
POLR1B-206ENST00000430293 METP08581 1390 aa18.57■□□□□ 0.56
POLR1B-206ENST00000430293 SHPRHQ149N8 1683 aa18.57■□□□□ 0.56
POLR1B-206ENST00000430293 ZNF326Q5BKZ1 582 aaKnown RBP18.57■□□□□ 0.56
POLR1B-206ENST00000430293 MSH6P52701 1360 aa18.56■□□□□ 0.56
POLR1B-206ENST00000430293 UPF1Q92900 1129 aaKnown RBP eCLIP18.56■□□□□ 0.56
POLR1B-206ENST00000430293 SLAIN2Q9P270 581 aa18.56■□□□□ 0.56
POLR1B-206ENST00000430293 IFT172Q9UG01 1749 aa18.55■□□□□ 0.56
POLR1B-206ENST00000430293 AHDC1Q5TGY3 1603 aaPredicted RBP18.54■□□□□ 0.56
POLR1B-206ENST00000430293 SPATA31E1Q6ZUB1 1445 aa18.54■□□□□ 0.56
POLR1B-206ENST00000430293 SETD5Q9C0A6 1442 aa18.54■□□□□ 0.56
POLR1B-206ENST00000430293 AMOTL2Q9Y2J4 779 aa18.53■□□□□ 0.56
POLR1B-206ENST00000430293 MPHOSPH9Q99550 1183 aa18.52■□□□□ 0.56
POLR1B-206ENST00000430293 RAB3GAP2Q9H2M9 1393 aa18.51■□□□□ 0.55
POLR1B-206ENST00000430293 NALCNQ8IZF0 1738 aa18.51■□□□□ 0.55
POLR1B-206ENST00000430293 CCDC144AA2RUR9 1427 aa18.5■□□□□ 0.55
POLR1B-206ENST00000430293 PRAG1Q86YV5 1406 aa18.5■□□□□ 0.55
POLR1B-206ENST00000430293 SPATA31A6Q5VVP1 1343 aa18.49■□□□□ 0.55
POLR1B-206ENST00000430293 DCCP43146 1447 aa18.49■□□□□ 0.55
POLR1B-206ENST00000430293 RPGRIP1LQ68CZ1 1315 aa18.48■□□□□ 0.55
POLR1B-206ENST00000430293 PTCH1Q13635 1447 aa18.47■□□□□ 0.55
POLR1B-206ENST00000430293 CDK12Q9NYV4 1490 aaPredicted RBP18.46■□□□□ 0.55
POLR1B-206ENST00000430293 ASXL1Q8IXJ9 1541 aa18.46■□□□□ 0.55
POLR1B-206ENST00000430293 EP400Q96L91 3159 aa18.46■□□□□ 0.55
POLR1B-206ENST00000430293 ZNF772Q68DY9 489 aaPredicted RBP18.45■□□□□ 0.54
POLR1B-206ENST00000430293 C19orf44Q9H6X5 657 aa18.45■□□□□ 0.54
POLR1B-206ENST00000430293 ADGRL3Q9HAR2 1447 aa18.45■□□□□ 0.54
POLR1B-206ENST00000430293 MST1RQ04912 1400 aa18.44■□□□□ 0.54
POLR1B-206ENST00000430293 VGFO15240 615 aaPredicted RBP18.43■□□□□ 0.54
POLR1B-206ENST00000430293 ADGRF5Q8IZF2 1346 aa18.43■□□□□ 0.54
POLR1B-206ENST00000430293 ROBO2Q9HCK4 1378 aa18.42■□□□□ 0.54
POLR1B-206ENST00000430293 C14orf37Q86TY3 774 aa18.42■□□□□ 0.54
POLR1B-206ENST00000430293 CADPS2Q86UW7 1296 aa18.42■□□□□ 0.54
POLR1B-206ENST00000430293 PIK3C2GO75747 1445 aa18.41■□□□□ 0.54
POLR1B-206ENST00000430293 NHSL1Q5SYE7 1610 aa18.41■□□□□ 0.54
POLR1B-206ENST00000430293 NRXN1Q9ULB1 1477 aa18.4■□□□□ 0.54
POLR1B-206ENST00000430293 ACIN1Q9UKV3 1341 aaKnown RBP18.4■□□□□ 0.54
POLR1B-206ENST00000430293 KNDC1Q76NI1 1749 aa18.39■□□□□ 0.53
POLR1B-206ENST00000430293 ANKRD30BQ9BXX2 1392 aa18.39■□□□□ 0.53
POLR1B-206ENST00000430293 ATF3P18847 181 aa18.38■□□□□ 0.53
POLR1B-206ENST00000430293 TECPR2O15040 1411 aa18.38■□□□□ 0.53
POLR1B-206ENST00000430293 MYOM2P54296 1465 aa18.38■□□□□ 0.53
POLR1B-206ENST00000430293 RXRBP28702 533 aa18.37■□□□□ 0.53
POLR1B-206ENST00000430293 MEX3CQ5U5Q3 659 aaKnown RBP18.37■□□□□ 0.53
POLR1B-206ENST00000430293 BRINP3Q76B58 766 aa18.37■□□□□ 0.53
POLR1B-206ENST00000430293 RGL3Q3MIN7 710 aa18.36■□□□□ 0.53
POLR1B-206ENST00000430293 RGS12O14924 1447 aa18.35■□□□□ 0.53
POLR1B-206ENST00000430293 LAMC1P11047 1609 aa18.34■□□□□ 0.53
POLR1B-206ENST00000430293 CDC42BPGQ6DT37 1551 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms