RNA–Protein interactions for RNA: ENST00000429978.5

GTDC1-210, Transcript of glycosyltransferase like domain containing 1, humanhuman

TSL 4

Gene GTDC1, Length 586 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-210ENST00000429978 GCC2Q8IWJ2 1684 aa23.97■■□□□ 1.43
GTDC1-210ENST00000429978 ROBO1Q9Y6N7 1651 aa23.95■■□□□ 1.43
GTDC1-210ENST00000429978 TMEM131LA2VDJ0 1609 aa23.95■■□□□ 1.43
GTDC1-210ENST00000429978 HDGFP51858 240 aaKnown RBP23.94■■□□□ 1.42
GTDC1-210ENST00000429978 SLC26A8Q96RN1 970 aa23.94■■□□□ 1.42
GTDC1-210ENST00000429978 RGS17Q9UGC6 210 aaPredicted RBP23.94■■□□□ 1.42
GTDC1-210ENST00000429978 ROCK1Q13464 1354 aa23.93■■□□□ 1.42
GTDC1-210ENST00000429978 CHD2O14647 1828 aaKnown RBP23.92■■□□□ 1.42
GTDC1-210ENST00000429978 PROSER2Q86WR7 435 aaPredicted RBP23.92■■□□□ 1.42
GTDC1-210ENST00000429978 MSH6P52701 1360 aa23.91■■□□□ 1.42
GTDC1-210ENST00000429978 DIP2AQ14689 1571 aa23.91■■□□□ 1.42
GTDC1-210ENST00000429978 RIMS2Q9UQ26 1411 aa23.91■■□□□ 1.42
GTDC1-210ENST00000429978 TBX22Q9Y458 520 aa23.89■■□□□ 1.41
GTDC1-210ENST00000429978 PIK3R4Q99570 1358 aa23.89■■□□□ 1.41
GTDC1-210ENST00000429978 IQGAP3Q86VI3 1631 aa23.88■■□□□ 1.41
GTDC1-210ENST00000429978 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.88■■□□□ 1.41
GTDC1-210ENST00000429978 MYO5BQ9ULV0 1848 aa23.87■■□□□ 1.41
GTDC1-210ENST00000429978 FAM50AQ14320 339 aaKnown RBP23.86■■□□□ 1.41
GTDC1-210ENST00000429978 E9PCH4 1651 aa23.86■■□□□ 1.41
GTDC1-210ENST00000429978 SLAIN2Q9P270 581 aa23.84■■□□□ 1.41
GTDC1-210ENST00000429978 ADAMTS13Q76LX8 1427 aa23.84■■□□□ 1.41
GTDC1-210ENST00000429978 SENP3Q9H4L4 574 aaPredicted RBP23.82■■□□□ 1.4
GTDC1-210ENST00000429978 JCADQ9P266 1359 aa23.8■■□□□ 1.4
GTDC1-210ENST00000429978 PPP1R15AO75807 674 aaPredicted RBP23.8■■□□□ 1.4
GTDC1-210ENST00000429978 PHLPP1O60346 1717 aa23.79■■□□□ 1.4
GTDC1-210ENST00000429978 COL16A1Q07092 1604 aaPredicted RBP23.79■■□□□ 1.4
GTDC1-210ENST00000429978 BCANQ96GW7 911 aa23.77■■□□□ 1.4
GTDC1-210ENST00000429978 AHDC1Q5TGY3 1603 aaPredicted RBP23.77■■□□□ 1.4
GTDC1-210ENST00000429978 TRPM2O94759 1503 aa23.76■■□□□ 1.39
GTDC1-210ENST00000429978 RBM33Q96EV2 1170 aaKnown RBP23.76■■□□□ 1.39
GTDC1-210ENST00000429978 DCCP43146 1447 aa23.76■■□□□ 1.39
GTDC1-210ENST00000429978 POTEAQ6S8J7 498 aa23.75■■□□□ 1.39
GTDC1-210ENST00000429978 CADPS2Q86UW7 1296 aa23.74■■□□□ 1.39
GTDC1-210ENST00000429978 C19orf44Q9H6X5 657 aa23.73■■□□□ 1.39
GTDC1-210ENST00000429978 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.73■■□□□ 1.39
GTDC1-210ENST00000429978 SPATA31A6Q5VVP1 1343 aa23.72■■□□□ 1.39
GTDC1-210ENST00000429978 SETBP1Q9Y6X0 1596 aa23.72■■□□□ 1.39
GTDC1-210ENST00000429978 NUP155O75694 1391 aa23.7■■□□□ 1.38
GTDC1-210ENST00000429978 SHPRHQ149N8 1683 aa23.69■■□□□ 1.38
GTDC1-210ENST00000429978 XRN1Q8IZH2 1706 aaKnown RBP23.68■■□□□ 1.38
GTDC1-210ENST00000429978 NRXN3Q9Y4C0 1643 aa23.67■■□□□ 1.38
GTDC1-210ENST00000429978 PTPRUQ92729 1446 aa23.67■■□□□ 1.38
GTDC1-210ENST00000429978 SPHKAPQ2M3C7 1700 aa23.65■■□□□ 1.38
GTDC1-210ENST00000429978 CHGAP10645 457 aaKnown RBP23.64■■□□□ 1.37
GTDC1-210ENST00000429978 ATF3P18847 181 aa23.64■■□□□ 1.37
GTDC1-210ENST00000429978 LRP6O75581 1613 aa23.63■■□□□ 1.37
GTDC1-210ENST00000429978 AMOTL2Q9Y2J4 779 aa23.62■■□□□ 1.37
GTDC1-210ENST00000429978 C14orf37Q86TY3 774 aa23.6■■□□□ 1.37
GTDC1-210ENST00000429978 SETD5Q9C0A6 1442 aa23.59■■□□□ 1.37
GTDC1-210ENST00000429978 ZNF772Q68DY9 489 aaPredicted RBP23.58■■□□□ 1.37
GTDC1-210ENST00000429978 BRINP3Q76B58 766 aa23.58■■□□□ 1.37
GTDC1-210ENST00000429978 ASXL1Q8IXJ9 1541 aa23.58■■□□□ 1.36
GTDC1-210ENST00000429978 MST1RQ04912 1400 aa23.57■■□□□ 1.36
GTDC1-210ENST00000429978 NHSL1Q5SYE7 1610 aa23.56■■□□□ 1.36
GTDC1-210ENST00000429978 NEXMIFQ5QGS0 1516 aa23.56■■□□□ 1.36
GTDC1-210ENST00000429978 NUTM2DQ5VT03 806 aaPredicted RBP23.56■■□□□ 1.36
GTDC1-210ENST00000429978 PRAG1Q86YV5 1406 aa23.56■■□□□ 1.36
GTDC1-210ENST00000429978 CDK12Q9NYV4 1490 aaPredicted RBP23.55■■□□□ 1.36
GTDC1-210ENST00000429978 ADGRL3Q9HAR2 1447 aa23.54■■□□□ 1.36
GTDC1-210ENST00000429978 RRBP1Q9P2E9 1410 aaKnown RBP23.53■■□□□ 1.36
GTDC1-210ENST00000429978 METP08581 1390 aa23.52■■□□□ 1.36
GTDC1-210ENST00000429978 CLTCL1P53675 1640 aa23.52■■□□□ 1.36
GTDC1-210ENST00000429978 SETD1AO15047 1707 aaKnown RBP23.51■■□□□ 1.35
GTDC1-210ENST00000429978 LAMC1P11047 1609 aa23.51■■□□□ 1.35
GTDC1-210ENST00000429978 PTCH1Q13635 1447 aa23.5■■□□□ 1.35
GTDC1-210ENST00000429978 NAIPQ13075 1403 aa23.48■■□□□ 1.35
GTDC1-210ENST00000429978 MEX3CQ5U5Q3 659 aaKnown RBP23.47■■□□□ 1.35
GTDC1-210ENST00000429978 KIF1BO60333 1816 aa23.46■■□□□ 1.35
GTDC1-210ENST00000429978 ZNF326Q5BKZ1 582 aaKnown RBP23.46■■□□□ 1.35
GTDC1-210ENST00000429978 NALCNQ8IZF0 1738 aa23.46■■□□□ 1.35
GTDC1-210ENST00000429978 LRRC59Q96AG4 307 aaKnown RBP23.46■■□□□ 1.35
GTDC1-210ENST00000429978 ITGAEP38570 1179 aa23.44■■□□□ 1.34
GTDC1-210ENST00000429978 RPGRIP1LQ68CZ1 1315 aa23.42■■□□□ 1.34
GTDC1-210ENST00000429978 HFM1A2PYH4 1435 aa23.42■■□□□ 1.34
GTDC1-210ENST00000429978 PNPLA6Q8IY17 1366 aa23.41■■□□□ 1.34
GTDC1-210ENST00000429978 RXRBP28702 533 aa23.41■■□□□ 1.34
GTDC1-210ENST00000429978 C1orf167Q5SNV9 1468 aa23.41■■□□□ 1.34
GTDC1-210ENST00000429978 VGFO15240 615 aaPredicted RBP23.4■■□□□ 1.34
GTDC1-210ENST00000429978 UPF1Q92900 1129 aaKnown RBP eCLIP23.4■■□□□ 1.34
GTDC1-210ENST00000429978 AFF2P51816 1311 aa23.36■■□□□ 1.33
GTDC1-210ENST00000429978 SOS2Q07890 1332 aaPredicted RBP23.34■■□□□ 1.33
GTDC1-210ENST00000429978 PPLO60437 1756 aa23.33■■□□□ 1.33
GTDC1-210ENST00000429978 ROBO2Q9HCK4 1378 aa23.33■■□□□ 1.33
GTDC1-210ENST00000429978 NUTM2BA6NNL0 878 aaPredicted RBP23.31■■□□□ 1.32
GTDC1-210ENST00000429978 NUTM2EB1AL46 878 aaPredicted RBP23.31■■□□□ 1.32
GTDC1-210ENST00000429978 NUTM2AQ8IVF1 878 aaPredicted RBP23.31■■□□□ 1.32
GTDC1-210ENST00000429978 TRIM52Q96A61 297 aa23.31■■□□□ 1.32
GTDC1-210ENST00000429978 CDC42BPGQ6DT37 1551 aa23.31■■□□□ 1.32
GTDC1-210ENST00000429978 COL22A1Q8NFW1 1626 aaPredicted RBP23.3■■□□□ 1.32
GTDC1-210ENST00000429978 RBM6P78332 1123 aaKnown RBP23.29■■□□□ 1.32
GTDC1-210ENST00000429978 TECPR2O15040 1411 aa23.28■■□□□ 1.32
GTDC1-210ENST00000429978 RGS12O14924 1447 aa23.27■■□□□ 1.32
GTDC1-210ENST00000429978 DDX17Q92841 729 aaKnown RBP23.25■■□□□ 1.31
GTDC1-210ENST00000429978 C8orf37Q96NL8 207 aa23.25■■□□□ 1.31
GTDC1-210ENST00000429978 SLC4A1APQ9BWU0 796 aaKnown RBP23.25■■□□□ 1.31
GTDC1-210ENST00000429978 QTRT2Q9H974 415 aaKnown RBP23.25■■□□□ 1.31
GTDC1-210ENST00000429978 PPARGC1BQ86YN6 1023 aaKnown RBP23.24■■□□□ 1.31
GTDC1-210ENST00000429978 FNBP4Q8N3X1 1017 aaPredicted RBP23.23■■□□□ 1.31
GTDC1-210ENST00000429978 MYOM2P54296 1465 aa23.23■■□□□ 1.31
GTDC1-210ENST00000429978 NGLY1Q96IV0 654 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms