RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 LRPPRCP42704 1394 aaKnown RBP18.52■□□□□ 0.56
THBS3-202ENST00000428962 AEBP2Q6ZN18 517 aaPredicted RBP18.52■□□□□ 0.56
THBS3-202ENST00000428962 KIF1BO60333 1816 aa18.52■□□□□ 0.55
THBS3-202ENST00000428962 EIF3AQ14152 1382 aaKnown RBP18.51■□□□□ 0.55
THBS3-202ENST00000428962 NLRP13Q86W25 1043 aa18.51■□□□□ 0.55
THBS3-202ENST00000428962 CDCA8Q53HL2 280 aa18.49■□□□□ 0.55
THBS3-202ENST00000428962 NEO1Q92859 1461 aa18.49■□□□□ 0.55
THBS3-202ENST00000428962 PER1O15534 1290 aaPredicted RBP18.47■□□□□ 0.55
THBS3-202ENST00000428962 IFT172Q9UG01 1749 aa18.47■□□□□ 0.55
THBS3-202ENST00000428962 SYNMO15061 1565 aa18.46■□□□□ 0.55
THBS3-202ENST00000428962 NUDCQ9Y266 331 aa18.46■□□□□ 0.55
THBS3-202ENST00000428962 FRMPD1Q5SYB0 1578 aa18.45■□□□□ 0.54
THBS3-202ENST00000428962 ZMYM4Q5VZL5 1548 aa18.45■□□□□ 0.54
THBS3-202ENST00000428962 SLC24A1O60721 1099 aa18.44■□□□□ 0.54
THBS3-202ENST00000428962 UGGT1Q9NYU2 1555 aa18.44■□□□□ 0.54
THBS3-202ENST00000428962 INSRP06213 1382 aa18.44■□□□□ 0.54
THBS3-202ENST00000428962 PANK3Q9H999 370 aa18.44■□□□□ 0.54
THBS3-202ENST00000428962 PPP4R2Q9NY27 417 aa18.44■□□□□ 0.54
THBS3-202ENST00000428962 ABCA6Q8N139 1617 aa18.43■□□□□ 0.54
THBS3-202ENST00000428962 ADGRB3O60242 1522 aa18.43■□□□□ 0.54
THBS3-202ENST00000428962 IRX6P78412 446 aaPredicted RBP18.42■□□□□ 0.54
THBS3-202ENST00000428962 MROH2AA6NES4 1674 aa18.42■□□□□ 0.54
THBS3-202ENST00000428962 NRXN1Q9ULB1 1477 aa18.41■□□□□ 0.54
THBS3-202ENST00000428962 KDM5AP29375 1690 aaKnown RBP18.4■□□□□ 0.54
THBS3-202ENST00000428962 ABCC3O15438 1527 aa18.38■□□□□ 0.53
THBS3-202ENST00000428962 NPATQ14207 1427 aa18.38■□□□□ 0.53
THBS3-202ENST00000428962 KDM4FA0A1W2PPD8 638 aa18.37■□□□□ 0.53
THBS3-202ENST00000428962 RAPGEF3O95398 923 aa18.37■□□□□ 0.53
THBS3-202ENST00000428962 CC2D1BQ5T0F9 858 aaKnown RBP18.37■□□□□ 0.53
THBS3-202ENST00000428962 SETBP1Q9Y6X0 1596 aa18.37■□□□□ 0.53
THBS3-202ENST00000428962 MYO3AQ8NEV4 1616 aa18.37■□□□□ 0.53
THBS3-202ENST00000428962 CAMSAP1Q5T5Y3 1602 aa18.36■□□□□ 0.53
THBS3-202ENST00000428962 MYOM1P52179 1685 aa18.36■□□□□ 0.53
THBS3-202ENST00000428962 KNSTRNQ9Y448 316 aa18.36■□□□□ 0.53
THBS3-202ENST00000428962 RNF123Q5XPI4 1314 aa18.35■□□□□ 0.53
THBS3-202ENST00000428962 DIP2CQ9Y2E4 1556 aa18.35■□□□□ 0.53
THBS3-202ENST00000428962 ZC3H13Q5T200 1668 aaKnown RBP18.35■□□□□ 0.53
THBS3-202ENST00000428962 PPLO60437 1756 aa18.34■□□□□ 0.53
THBS3-202ENST00000428962 ASXL1Q8IXJ9 1541 aa18.34■□□□□ 0.53
THBS3-202ENST00000428962 BLMP54132 1417 aaPredicted RBP18.34■□□□□ 0.53
THBS3-202ENST00000428962 ADGRF5Q8IZF2 1346 aa18.34■□□□□ 0.53
THBS3-202ENST00000428962 RICTORQ6R327 1708 aa18.34■□□□□ 0.53
THBS3-202ENST00000428962 PDE3BQ13370 1112 aa18.33■□□□□ 0.53
THBS3-202ENST00000428962 NPC1L1Q9UHC9 1359 aa18.33■□□□□ 0.52
THBS3-202ENST00000428962 SBNO2Q9Y2G9 1366 aa18.33■□□□□ 0.52
THBS3-202ENST00000428962 CFAP70Q5T0N1 1121 aa18.33■□□□□ 0.52
THBS3-202ENST00000428962 GGT6Q6P531 493 aa18.33■□□□□ 0.52
THBS3-202ENST00000428962 NOS1P29475 1434 aa18.32■□□□□ 0.52
THBS3-202ENST00000428962 RPGRIP1LQ68CZ1 1315 aa18.32■□□□□ 0.52
THBS3-202ENST00000428962 PIK3C2GO75747 1445 aa18.3■□□□□ 0.52
THBS3-202ENST00000428962 ERVK-7P63135 1459 aa18.29■□□□□ 0.52
THBS3-202ENST00000428962 PIK3C2BO00750 1634 aa18.29■□□□□ 0.52
THBS3-202ENST00000428962 ARHGAP31Q2M1Z3 1444 aa18.28■□□□□ 0.52
THBS3-202ENST00000428962 CHGAP10645 457 aaKnown RBP18.28■□□□□ 0.52
THBS3-202ENST00000428962 AMER1Q5JTC6 1135 aaPredicted RBP18.28■□□□□ 0.52
THBS3-202ENST00000428962 PPP2R1AP30153 589 aa18.25■□□□□ 0.51
THBS3-202ENST00000428962 SIGLEC1Q9BZZ2 1709 aa18.24■□□□□ 0.51
THBS3-202ENST00000428962 RBM19Q9Y4C8 960 aaKnown RBP18.24■□□□□ 0.51
THBS3-202ENST00000428962 CENPJQ9HC77 1338 aaPredicted RBP18.24■□□□□ 0.51
THBS3-202ENST00000428962 C14orf93Q9H972 538 aaKnown RBP18.23■□□□□ 0.51
THBS3-202ENST00000428962 ADGRB1O14514 1584 aa18.23■□□□□ 0.51
THBS3-202ENST00000428962 CFAP65Q6ZU64 1925 aaKnown RBP18.23■□□□□ 0.51
THBS3-202ENST00000428962 QRICH2Q9H0J4 1663 aa18.23■□□□□ 0.51
THBS3-202ENST00000428962 WDR43Q15061 677 aaKnown RBP eCLIP18.22■□□□□ 0.51
THBS3-202ENST00000428962 B4GALNT3Q6L9W6 998 aa18.22■□□□□ 0.51
THBS3-202ENST00000428962 NEXMIFQ5QGS0 1516 aa18.21■□□□□ 0.51
THBS3-202ENST00000428962 SENP3-EIF4A1A0A087X0R7 540 aa18.21■□□□□ 0.51
THBS3-202ENST00000428962 RCAN3Q9UKA8 241 aa18.2■□□□□ 0.5
THBS3-202ENST00000428962 YEATS2Q9ULM3 1422 aa18.19■□□□□ 0.5
THBS3-202ENST00000428962 RRP1P56182 461 aaKnown RBP18.19■□□□□ 0.5
THBS3-202ENST00000428962 VGFO15240 615 aaPredicted RBP18.18■□□□□ 0.5
THBS3-202ENST00000428962 ARHGEF40Q8TER5 1519 aa18.17■□□□□ 0.5
THBS3-202ENST00000428962 ZFYVE9O95405 1425 aa18.17■□□□□ 0.5
THBS3-202ENST00000428962 CCDC136Q96JN2 1154 aa18.16■□□□□ 0.5
THBS3-202ENST00000428962 SLC52A1Q9NWF4 448 aa18.16■□□□□ 0.5
THBS3-202ENST00000428962 SALL2Q9Y467 1007 aaPredicted RBP18.16■□□□□ 0.5
THBS3-202ENST00000428962 PREX1Q8TCU6 1659 aa18.16■□□□□ 0.5
THBS3-202ENST00000428962 ADAMTS8Q9UP79 889 aa18.16■□□□□ 0.5
THBS3-202ENST00000428962 TRAK1Q9UPV9 953 aa18.14■□□□□ 0.5
THBS3-202ENST00000428962 REREQ9P2R6 1566 aa18.14■□□□□ 0.49
THBS3-202ENST00000428962 USP32Q8NFA0 1604 aa18.14■□□□□ 0.49
THBS3-202ENST00000428962 ARHGEF28Q8N1W1 1705 aaKnown RBP18.14■□□□□ 0.49
THBS3-202ENST00000428962 PUS7Q96PZ0 661 aaKnown RBP18.13■□□□□ 0.49
THBS3-202ENST00000428962 TMEM131LA2VDJ0 1609 aa18.11■□□□□ 0.49
THBS3-202ENST00000428962 CDCA7LQ96GN5 454 aa18.1■□□□□ 0.49
THBS3-202ENST00000428962 CARD14Q9BXL6 1004 aa18.1■□□□□ 0.49
THBS3-202ENST00000428962 AGLP35573 1532 aa18.1■□□□□ 0.49
THBS3-202ENST00000428962 NSD3Q9BZ95 1437 aa18.1■□□□□ 0.49
THBS3-202ENST00000428962 IDI1Q13907 227 aa18.09■□□□□ 0.49
THBS3-202ENST00000428962 EVC2Q86UK5 1308 aa18.08■□□□□ 0.49
THBS3-202ENST00000428962 FANCIQ9NVI1 1328 aa18.08■□□□□ 0.49
THBS3-202ENST00000428962 TMEM132EQ6IEE7 984 aa18.08■□□□□ 0.48
THBS3-202ENST00000428962 NGEFQ8N5V2 710 aa18.07■□□□□ 0.48
THBS3-202ENST00000428962 PPP6R1Q9UPN7 881 aa18.07■□□□□ 0.48
THBS3-202ENST00000428962 POLR3AO14802 1390 aaPredicted RBP18.07■□□□□ 0.48
THBS3-202ENST00000428962 PLEKHH1Q9ULM0 1364 aa18.06■□□□□ 0.48
THBS3-202ENST00000428962 TULP4Q9NRJ4 1543 aa18.06■□□□□ 0.48
THBS3-202ENST00000428962 MYO5BQ9ULV0 1848 aa18.06■□□□□ 0.48
THBS3-202ENST00000428962 ZNF521Q96K83 1311 aa18.06■□□□□ 0.48
THBS3-202ENST00000428962 ADAMTSL3P82987 1691 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms