RNA–Protein interactions for RNA: ENST00000428895.1

BX088651.4-202, humanhuman

TSL 1 (best) BASIC

Gene BX088651.4, Length 1,479 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BX088651.4-202ENST00000428895 CHGAP10645 457 aaKnown RBP18.98■□□□□ 0.63
BX088651.4-202ENST00000428895 TMEM131LA2VDJ0 1609 aa18.98■□□□□ 0.63
BX088651.4-202ENST00000428895 CPS1P31327 1500 aa18.97■□□□□ 0.63
BX088651.4-202ENST00000428895 LTKP29376 864 aa18.97■□□□□ 0.63
BX088651.4-202ENST00000428895 CCDC144AA2RUR9 1427 aa18.94■□□□□ 0.62
BX088651.4-202ENST00000428895 TXNDC2Q86VQ3 553 aa18.94■□□□□ 0.62
BX088651.4-202ENST00000428895 STRCP1A6NGW2 1772 aa18.92■□□□□ 0.62
BX088651.4-202ENST00000428895 EID1Q9Y6B2 187 aa18.91■□□□□ 0.62
BX088651.4-202ENST00000428895 ANKRD30BQ9BXX2 1392 aa18.91■□□□□ 0.62
BX088651.4-202ENST00000428895 ZFYVE9O95405 1425 aa18.89■□□□□ 0.62
BX088651.4-202ENST00000428895 DHX57Q6P158 1386 aaKnown RBP18.89■□□□□ 0.61
BX088651.4-202ENST00000428895 ZNF326Q5BKZ1 582 aaKnown RBP18.88■□□□□ 0.61
BX088651.4-202ENST00000428895 RIMS2Q9UQ26 1411 aa18.85■□□□□ 0.61
BX088651.4-202ENST00000428895 LRRC7Q96NW7 1537 aa18.85■□□□□ 0.61
BX088651.4-202ENST00000428895 RGL3Q3MIN7 710 aa18.84■□□□□ 0.61
BX088651.4-202ENST00000428895 NUTM2DQ5VT03 806 aaPredicted RBP18.84■□□□□ 0.61
BX088651.4-202ENST00000428895 PPLO60437 1756 aa18.83■□□□□ 0.6
BX088651.4-202ENST00000428895 SPATA31E1Q6ZUB1 1445 aa18.82■□□□□ 0.6
BX088651.4-202ENST00000428895 PLEKHG1Q9ULL1 1385 aa18.81■□□□□ 0.6
BX088651.4-202ENST00000428895 NEXMIFQ5QGS0 1516 aa18.81■□□□□ 0.6
BX088651.4-202ENST00000428895 UBAP1LF5GYI3 381 aa18.81■□□□□ 0.6
BX088651.4-202ENST00000428895 PPP1R15AO75807 674 aaPredicted RBP18.81■□□□□ 0.6
BX088651.4-202ENST00000428895 HDGFP51858 240 aaKnown RBP18.81■□□□□ 0.6
BX088651.4-202ENST00000428895 SENP3Q9H4L4 574 aaPredicted RBP18.81■□□□□ 0.6
BX088651.4-202ENST00000428895 ALKQ9UM73 1620 aa18.81■□□□□ 0.6
BX088651.4-202ENST00000428895 IFT172Q9UG01 1749 aa18.8■□□□□ 0.6
BX088651.4-202ENST00000428895 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.8■□□□□ 0.6
BX088651.4-202ENST00000428895 NWD1Q149M9 1564 aa18.79■□□□□ 0.6
BX088651.4-202ENST00000428895 XIRP1Q702N8 1843 aaKnown RBP18.78■□□□□ 0.6
BX088651.4-202ENST00000428895 BCANQ96GW7 911 aa18.77■□□□□ 0.6
BX088651.4-202ENST00000428895 SLC26A8Q96RN1 970 aa18.77■□□□□ 0.59
BX088651.4-202ENST00000428895 SIN3AQ96ST3 1273 aa18.77■□□□□ 0.59
BX088651.4-202ENST00000428895 NEUROD1Q13562 356 aa18.76■□□□□ 0.59
BX088651.4-202ENST00000428895 RPGRIP1LQ68CZ1 1315 aa18.76■□□□□ 0.59
BX088651.4-202ENST00000428895 KCNA6P17658 529 aa18.75■□□□□ 0.59
BX088651.4-202ENST00000428895 TOM1O60784 492 aa18.74■□□□□ 0.59
BX088651.4-202ENST00000428895 ADAMTS13Q76LX8 1427 aa18.74■□□□□ 0.59
BX088651.4-202ENST00000428895 NKTRP30414 1462 aaKnown RBP18.74■□□□□ 0.59
BX088651.4-202ENST00000428895 DIP2AQ14689 1571 aa18.74■□□□□ 0.59
BX088651.4-202ENST00000428895 CHD2O14647 1828 aaKnown RBP18.73■□□□□ 0.59
BX088651.4-202ENST00000428895 VGFO15240 615 aaPredicted RBP18.72■□□□□ 0.59
BX088651.4-202ENST00000428895 TBX22Q9Y458 520 aa18.71■□□□□ 0.59
BX088651.4-202ENST00000428895 NRXN3Q9Y4C0 1643 aa18.71■□□□□ 0.59
BX088651.4-202ENST00000428895 CCER1Q8TC90 406 aaPredicted RBP18.71■□□□□ 0.59
BX088651.4-202ENST00000428895 SETBP1Q9Y6X0 1596 aa18.7■□□□□ 0.58
BX088651.4-202ENST00000428895 DCAF11Q8TEB1 546 aa18.69■□□□□ 0.58
BX088651.4-202ENST00000428895 TMEM94Q12767 1356 aa18.68■□□□□ 0.58
BX088651.4-202ENST00000428895 PIK3R4Q99570 1358 aa18.68■□□□□ 0.58
BX088651.4-202ENST00000428895 ADGRF5Q8IZF2 1346 aa18.68■□□□□ 0.58
BX088651.4-202ENST00000428895 KDM2AQ9Y2K7 1162 aa18.68■□□□□ 0.58
BX088651.4-202ENST00000428895 MYOM2P54296 1465 aa18.66■□□□□ 0.58
BX088651.4-202ENST00000428895 PIP4K2BP78356 416 aa18.65■□□□□ 0.58
BX088651.4-202ENST00000428895 SETD1AO15047 1707 aaKnown RBP18.65■□□□□ 0.58
BX088651.4-202ENST00000428895 SCAF1Q9H7N4 1312 aaKnown RBP18.64■□□□□ 0.57
BX088651.4-202ENST00000428895 PROSER2Q86WR7 435 aaPredicted RBP18.64■□□□□ 0.57
BX088651.4-202ENST00000428895 L3MBTL2Q969R5 705 aa18.63■□□□□ 0.57
BX088651.4-202ENST00000428895 PIK3C2GO75747 1445 aa18.62■□□□□ 0.57
BX088651.4-202ENST00000428895 CLSPNQ9HAW4 1339 aa18.62■□□□□ 0.57
BX088651.4-202ENST00000428895 PTPRUQ92729 1446 aa18.62■□□□□ 0.57
BX088651.4-202ENST00000428895 NCOA3Q9Y6Q9 1424 aa18.62■□□□□ 0.57
BX088651.4-202ENST00000428895 NRXN1Q9ULB1 1477 aa18.61■□□□□ 0.57
BX088651.4-202ENST00000428895 XRN1Q8IZH2 1706 aaKnown RBP18.61■□□□□ 0.57
BX088651.4-202ENST00000428895 HSPA1LP34931 641 aa18.61■□□□□ 0.57
BX088651.4-202ENST00000428895 TONSLQ96HA7 1378 aa18.6■□□□□ 0.57
BX088651.4-202ENST00000428895 STAC3Q96MF2 364 aa18.6■□□□□ 0.57
BX088651.4-202ENST00000428895 RBM33Q96EV2 1170 aaKnown RBP18.59■□□□□ 0.57
BX088651.4-202ENST00000428895 LAMC1P11047 1609 aa18.59■□□□□ 0.57
BX088651.4-202ENST00000428895 METP08581 1390 aa18.59■□□□□ 0.57
BX088651.4-202ENST00000428895 FAM135BQ49AJ0 1406 aa18.58■□□□□ 0.56
BX088651.4-202ENST00000428895 CFAP70Q5T0N1 1121 aa18.57■□□□□ 0.56
BX088651.4-202ENST00000428895 MSH6P52701 1360 aa18.56■□□□□ 0.56
BX088651.4-202ENST00000428895 AMOTL2Q9Y2J4 779 aa18.56■□□□□ 0.56
BX088651.4-202ENST00000428895 C14orf93Q9H972 538 aaKnown RBP18.55■□□□□ 0.56
BX088651.4-202ENST00000428895 TMEM132EQ6IEE7 984 aa18.54■□□□□ 0.56
BX088651.4-202ENST00000428895 PRAG1Q86YV5 1406 aa18.54■□□□□ 0.56
BX088651.4-202ENST00000428895 ASXL1Q8IXJ9 1541 aa18.54■□□□□ 0.56
BX088651.4-202ENST00000428895 DISP3Q9P2K9 1392 aa18.53■□□□□ 0.56
BX088651.4-202ENST00000428895 KIAA1210Q9ULL0 1709 aa18.53■□□□□ 0.56
BX088651.4-202ENST00000428895 ROBO1Q9Y6N7 1651 aa18.52■□□□□ 0.56
BX088651.4-202ENST00000428895 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.52■□□□□ 0.56
BX088651.4-202ENST00000428895 TRPM1Q7Z4N2 1603 aa18.5■□□□□ 0.55
BX088651.4-202ENST00000428895 STK26Q9P289 416 aa18.5■□□□□ 0.55
BX088651.4-202ENST00000428895 C19orf44Q9H6X5 657 aa18.49■□□□□ 0.55
BX088651.4-202ENST00000428895 DCCP43146 1447 aa18.48■□□□□ 0.55
BX088651.4-202ENST00000428895 KNDC1Q76NI1 1749 aa18.48■□□□□ 0.55
BX088651.4-202ENST00000428895 SLAIN2Q9P270 581 aa18.48■□□□□ 0.55
BX088651.4-202ENST00000428895 ADGRB1O14514 1584 aa18.48■□□□□ 0.55
BX088651.4-202ENST00000428895 MED1Q15648 1581 aaPredicted RBP18.48■□□□□ 0.55
BX088651.4-202ENST00000428895 YTHDC2Q9H6S0 1430 aaKnown RBP18.48■□□□□ 0.55
BX088651.4-202ENST00000428895 PTCH1Q13635 1447 aa18.47■□□□□ 0.55
BX088651.4-202ENST00000428895 NBPF8Q3BBV2 869 aa18.46■□□□□ 0.55
BX088651.4-202ENST00000428895 LRPPRCP42704 1394 aaKnown RBP18.46■□□□□ 0.55
BX088651.4-202ENST00000428895 NBPF1Q3BBV0 1214 aa18.46■□□□□ 0.54
BX088651.4-202ENST00000428895 CADPS2Q86UW7 1296 aa18.46■□□□□ 0.54
BX088651.4-202ENST00000428895 TIMELESSQ9UNS1 1208 aa18.46■□□□□ 0.54
BX088651.4-202ENST00000428895 ROBO2Q9HCK4 1378 aa18.44■□□□□ 0.54
BX088651.4-202ENST00000428895 PHLPP1O60346 1717 aa18.44■□□□□ 0.54
BX088651.4-202ENST00000428895 NALCNQ8IZF0 1738 aa18.44■□□□□ 0.54
BX088651.4-202ENST00000428895 ADGRL3Q9HAR2 1447 aa18.44■□□□□ 0.54
BX088651.4-202ENST00000428895 C14orf37Q86TY3 774 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 288 ms