RNA–Protein interactions for RNA: ENST00000428740.5

IMP4-204, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 3

Gene IMP4, Length 924 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-204ENST00000428740 RIMS2Q9UQ26 1411 aa22.48■■□□□ 1.19
IMP4-204ENST00000428740 PLEKHG1Q9ULL1 1385 aa22.47■■□□□ 1.19
IMP4-204ENST00000428740 ZFYVE9O95405 1425 aa22.46■■□□□ 1.19
IMP4-204ENST00000428740 TMEM131LA2VDJ0 1609 aa22.46■■□□□ 1.19
IMP4-204ENST00000428740 SLC4A1APQ9BWU0 796 aaKnown RBP22.45■■□□□ 1.18
IMP4-204ENST00000428740 TBX22Q9Y458 520 aa22.45■■□□□ 1.18
IMP4-204ENST00000428740 LRRC7Q96NW7 1537 aa22.45■■□□□ 1.18
IMP4-204ENST00000428740 SCAF1Q9H7N4 1312 aaKnown RBP22.43■■□□□ 1.18
IMP4-204ENST00000428740 PIP4K2BP78356 416 aa22.43■■□□□ 1.18
IMP4-204ENST00000428740 PROSER2Q86WR7 435 aaPredicted RBP22.41■■□□□ 1.18
IMP4-204ENST00000428740 ZNF326Q5BKZ1 582 aaKnown RBP22.4■■□□□ 1.18
IMP4-204ENST00000428740 NUTM2DQ5VT03 806 aaPredicted RBP22.37■■□□□ 1.17
IMP4-204ENST00000428740 STRCP1A6NGW2 1772 aa22.36■■□□□ 1.17
IMP4-204ENST00000428740 PIK3R4Q99570 1358 aa22.35■■□□□ 1.17
IMP4-204ENST00000428740 SPHKAPQ2M3C7 1700 aa22.34■■□□□ 1.17
IMP4-204ENST00000428740 SENP3Q9H4L4 574 aaPredicted RBP22.34■■□□□ 1.17
IMP4-204ENST00000428740 TMEM94Q12767 1356 aa22.34■■□□□ 1.17
IMP4-204ENST00000428740 TRPM2O94759 1503 aa22.32■■□□□ 1.16
IMP4-204ENST00000428740 MYO5BQ9ULV0 1848 aa22.32■■□□□ 1.16
IMP4-204ENST00000428740 MPHOSPH9Q99550 1183 aa22.32■■□□□ 1.16
IMP4-204ENST00000428740 NKTRP30414 1462 aaKnown RBP22.32■■□□□ 1.16
IMP4-204ENST00000428740 RPGRIP1LQ68CZ1 1315 aa22.31■■□□□ 1.16
IMP4-204ENST00000428740 VGFO15240 615 aaPredicted RBP22.31■■□□□ 1.16
IMP4-204ENST00000428740 HSPA1LP34931 641 aa22.31■■□□□ 1.16
IMP4-204ENST00000428740 SETD5Q9C0A6 1442 aa22.3■■□□□ 1.16
IMP4-204ENST00000428740 ADAMTS13Q76LX8 1427 aa22.29■■□□□ 1.16
IMP4-204ENST00000428740 NCOA3Q9Y6Q9 1424 aa22.28■■□□□ 1.16
IMP4-204ENST00000428740 DIP2AQ14689 1571 aa22.28■■□□□ 1.16
IMP4-204ENST00000428740 NWD1Q149M9 1564 aa22.27■■□□□ 1.16
IMP4-204ENST00000428740 MSH6P52701 1360 aa22.26■■□□□ 1.15
IMP4-204ENST00000428740 AMOTL2Q9Y2J4 779 aa22.25■■□□□ 1.15
IMP4-204ENST00000428740 DISP3Q9P2K9 1392 aa22.25■■□□□ 1.15
IMP4-204ENST00000428740 CLTCL1P53675 1640 aa22.24■■□□□ 1.15
IMP4-204ENST00000428740 RBM33Q96EV2 1170 aaKnown RBP22.24■■□□□ 1.15
IMP4-204ENST00000428740 FOXD1Q16676 465 aa22.23■■□□□ 1.15
IMP4-204ENST00000428740 C14orf37Q86TY3 774 aa22.23■■□□□ 1.15
IMP4-204ENST00000428740 ALKQ9UM73 1620 aa22.23■■□□□ 1.15
IMP4-204ENST00000428740 FAM135BQ49AJ0 1406 aa22.23■■□□□ 1.15
IMP4-204ENST00000428740 CHD2O14647 1828 aaKnown RBP22.22■■□□□ 1.15
IMP4-204ENST00000428740 HRCP23327 699 aa22.21■■□□□ 1.15
IMP4-204ENST00000428740 C19orf44Q9H6X5 657 aa22.21■■□□□ 1.15
IMP4-204ENST00000428740 SLAIN2Q9P270 581 aa22.21■■□□□ 1.15
IMP4-204ENST00000428740 CCDC144AA2RUR9 1427 aa22.21■■□□□ 1.15
IMP4-204ENST00000428740 KIF1BO60333 1816 aa22.2■■□□□ 1.14
IMP4-204ENST00000428740 SETBP1Q9Y6X0 1596 aa22.2■■□□□ 1.14
IMP4-204ENST00000428740 CADPS2Q86UW7 1296 aa22.18■■□□□ 1.14
IMP4-204ENST00000428740 XIRP1Q702N8 1843 aaKnown RBP22.17■■□□□ 1.14
IMP4-204ENST00000428740 NEXMIFQ5QGS0 1516 aa22.17■■□□□ 1.14
IMP4-204ENST00000428740 ATF3P18847 181 aa22.17■■□□□ 1.14
IMP4-204ENST00000428740 RAB3GAP2Q9H2M9 1393 aa22.16■■□□□ 1.14
IMP4-204ENST00000428740 METP08581 1390 aa22.14■■□□□ 1.14
IMP4-204ENST00000428740 RGL3Q3MIN7 710 aa22.14■■□□□ 1.13
IMP4-204ENST00000428740 PTPRUQ92729 1446 aa22.14■■□□□ 1.13
IMP4-204ENST00000428740 ANKRD30BQ9BXX2 1392 aa22.12■■□□□ 1.13
IMP4-204ENST00000428740 NRXN3Q9Y4C0 1643 aa22.1■■□□□ 1.13
IMP4-204ENST00000428740 SPATA31E1Q6ZUB1 1445 aa22.08■■□□□ 1.13
IMP4-204ENST00000428740 DCCP43146 1447 aa22.06■■□□□ 1.12
IMP4-204ENST00000428740 ADGRF5Q8IZF2 1346 aa22.04■■□□□ 1.12
IMP4-204ENST00000428740 XRN1Q8IZH2 1706 aaKnown RBP22.03■■□□□ 1.12
IMP4-204ENST00000428740 PHF23Q9BUL5 403 aaPredicted RBP22.02■■□□□ 1.12
IMP4-204ENST00000428740 ROBO1Q9Y6N7 1651 aa22.01■■□□□ 1.11
IMP4-204ENST00000428740 PPLO60437 1756 aa22■■□□□ 1.11
IMP4-204ENST00000428740 ILDR2Q71H61 639 aa22■■□□□ 1.11
IMP4-204ENST00000428740 STAC3Q96MF2 364 aa22■■□□□ 1.11
IMP4-204ENST00000428740 SIPA1L2Q9P2F8 1722 aaPredicted RBP22■■□□□ 1.11
IMP4-204ENST00000428740 PTCH1Q13635 1447 aa21.99■■□□□ 1.11
IMP4-204ENST00000428740 PRAG1Q86YV5 1406 aa21.98■■□□□ 1.11
IMP4-204ENST00000428740 ADGRL3Q9HAR2 1447 aa21.98■■□□□ 1.11
IMP4-204ENST00000428740 MED1Q15648 1581 aaPredicted RBP21.98■■□□□ 1.11
IMP4-204ENST00000428740 BRINP3Q76B58 766 aa21.96■■□□□ 1.11
IMP4-204ENST00000428740 C14orf93Q9H972 538 aaKnown RBP21.96■■□□□ 1.11
IMP4-204ENST00000428740 ROBO2Q9HCK4 1378 aa21.96■■□□□ 1.11
IMP4-204ENST00000428740 JCADQ9P266 1359 aa21.95■■□□□ 1.1
IMP4-204ENST00000428740 SIRT1Q96EB6 747 aa21.94■■□□□ 1.1
IMP4-204ENST00000428740 PIK3C2GO75747 1445 aa21.93■■□□□ 1.1
IMP4-204ENST00000428740 LRPPRCP42704 1394 aaKnown RBP21.93■■□□□ 1.1
IMP4-204ENST00000428740 ABCC11Q96J66 1382 aa21.93■■□□□ 1.1
IMP4-204ENST00000428740 STK26Q9P289 416 aa21.93■■□□□ 1.1
IMP4-204ENST00000428740 MST1RQ04912 1400 aa21.92■■□□□ 1.1
IMP4-204ENST00000428740 SOCS7O14512 581 aa21.91■■□□□ 1.1
IMP4-204ENST00000428740 TMEM132EQ6IEE7 984 aa21.91■■□□□ 1.1
IMP4-204ENST00000428740 DHX57Q6P158 1386 aaKnown RBP21.9■■□□□ 1.1
IMP4-204ENST00000428740 SETD1AO15047 1707 aaKnown RBP21.9■■□□□ 1.1
IMP4-204ENST00000428740 MYOM2P54296 1465 aa21.89■■□□□ 1.09
IMP4-204ENST00000428740 PHLPP1O60346 1717 aa21.89■■□□□ 1.09
IMP4-204ENST00000428740 SPATA31A6Q5VVP1 1343 aa21.88■■□□□ 1.09
IMP4-204ENST00000428740 CFAP70Q5T0N1 1121 aa21.88■■□□□ 1.09
IMP4-204ENST00000428740 DCAF11Q8TEB1 546 aa21.88■■□□□ 1.09
IMP4-204ENST00000428740 LRRC59Q96AG4 307 aaKnown RBP21.88■■□□□ 1.09
IMP4-204ENST00000428740 IFT172Q9UG01 1749 aa21.88■■□□□ 1.09
IMP4-204ENST00000428740 TECPR2O15040 1411 aa21.88■■□□□ 1.09
IMP4-204ENST00000428740 NRXN1Q9ULB1 1477 aa21.87■■□□□ 1.09
IMP4-204ENST00000428740 AHDC1Q5TGY3 1603 aaPredicted RBP21.87■■□□□ 1.09
IMP4-204ENST00000428740 KDM2AQ9Y2K7 1162 aa21.86■■□□□ 1.09
IMP4-204ENST00000428740 WAPLQ7Z5K2 1190 aa21.85■■□□□ 1.09
IMP4-204ENST00000428740 YTHDC2Q9H6S0 1430 aaKnown RBP21.85■■□□□ 1.09
IMP4-204ENST00000428740 C1orf167Q5SNV9 1468 aa21.84■■□□□ 1.09
IMP4-204ENST00000428740 ASXL1Q8IXJ9 1541 aa21.84■■□□□ 1.09
IMP4-204ENST00000428740 COL16A1Q07092 1604 aaPredicted RBP21.82■■□□□ 1.08
IMP4-204ENST00000428740 NALCNQ8IZF0 1738 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 150.7 ms