RNA–Protein interactions for RNA: ENST00000428088.1

AL954642.1-201, humanhuman

TSL 3 BASIC

Gene AL954642.1, Length 538 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL954642.1-201ENST00000428088 BCANQ96GW7 911 aa28.95■■■□□ 2.22
AL954642.1-201ENST00000428088 ZFYVE9O95405 1425 aa28.94■■■□□ 2.22
AL954642.1-201ENST00000428088 HSPA1LP34931 641 aa28.93■■■□□ 2.22
AL954642.1-201ENST00000428088 RIMS2Q9UQ26 1411 aa28.93■■■□□ 2.22
AL954642.1-201ENST00000428088 XIRP1Q702N8 1843 aaKnown RBP28.92■■■□□ 2.22
AL954642.1-201ENST00000428088 PPP1R15AO75807 674 aaPredicted RBP28.9■■■□□ 2.22
AL954642.1-201ENST00000428088 KCNA6P17658 529 aa28.9■■■□□ 2.22
AL954642.1-201ENST00000428088 HDGFP51858 240 aaKnown RBP28.9■■■□□ 2.22
AL954642.1-201ENST00000428088 NAIPQ13075 1403 aa28.9■■■□□ 2.22
AL954642.1-201ENST00000428088 NUTM2DQ5VT03 806 aaPredicted RBP28.87■■■□□ 2.21
AL954642.1-201ENST00000428088 PLEKHG1Q9ULL1 1385 aa28.87■■■□□ 2.21
AL954642.1-201ENST00000428088 SPHKAPQ2M3C7 1700 aa28.84■■■□□ 2.21
AL954642.1-201ENST00000428088 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.84■■■□□ 2.21
AL954642.1-201ENST00000428088 PROSER2Q86WR7 435 aaPredicted RBP28.83■■■□□ 2.21
AL954642.1-201ENST00000428088 RBM33Q96EV2 1170 aaKnown RBP28.82■■■□□ 2.2
AL954642.1-201ENST00000428088 TMEM94Q12767 1356 aa28.82■■■□□ 2.2
AL954642.1-201ENST00000428088 NWD1Q149M9 1564 aa28.79■■■□□ 2.2
AL954642.1-201ENST00000428088 HFM1A2PYH4 1435 aa28.78■■■□□ 2.2
AL954642.1-201ENST00000428088 CHD2O14647 1828 aaKnown RBP28.78■■■□□ 2.2
AL954642.1-201ENST00000428088 ILDR2Q71H61 639 aa28.78■■■□□ 2.2
AL954642.1-201ENST00000428088 TRIM52Q96A61 297 aa28.78■■■□□ 2.2
AL954642.1-201ENST00000428088 TBX22Q9Y458 520 aa28.77■■■□□ 2.2
AL954642.1-201ENST00000428088 NKTRP30414 1462 aaKnown RBP28.75■■■□□ 2.19
AL954642.1-201ENST00000428088 ADAMTS13Q76LX8 1427 aa28.73■■■□□ 2.19
AL954642.1-201ENST00000428088 ZNF326Q5BKZ1 582 aaKnown RBP28.72■■■□□ 2.19
AL954642.1-201ENST00000428088 CLTCL1P53675 1640 aa28.71■■■□□ 2.19
AL954642.1-201ENST00000428088 TRPM2O94759 1503 aa28.69■■■□□ 2.18
AL954642.1-201ENST00000428088 DIP2AQ14689 1571 aa28.68■■■□□ 2.18
AL954642.1-201ENST00000428088 SLC4A1APQ9BWU0 796 aaKnown RBP28.66■■■□□ 2.18
AL954642.1-201ENST00000428088 KIF1BO60333 1816 aa28.66■■■□□ 2.18
AL954642.1-201ENST00000428088 MSH6P52701 1360 aa28.64■■■□□ 2.18
AL954642.1-201ENST00000428088 MED1Q15648 1581 aaPredicted RBP28.64■■■□□ 2.18
AL954642.1-201ENST00000428088 FAM135BQ49AJ0 1406 aa28.64■■■□□ 2.18
AL954642.1-201ENST00000428088 PIK3R4Q99570 1358 aa28.62■■■□□ 2.17
AL954642.1-201ENST00000428088 NRXN3Q9Y4C0 1643 aa28.61■■■□□ 2.17
AL954642.1-201ENST00000428088 AMOTL2Q9Y2J4 779 aa28.6■■■□□ 2.17
AL954642.1-201ENST00000428088 ROBO1Q9Y6N7 1651 aa28.6■■■□□ 2.17
AL954642.1-201ENST00000428088 PTPRUQ92729 1446 aa28.59■■■□□ 2.17
AL954642.1-201ENST00000428088 NEXMIFQ5QGS0 1516 aa28.59■■■□□ 2.17
AL954642.1-201ENST00000428088 SETBP1Q9Y6X0 1596 aa28.58■■■□□ 2.17
AL954642.1-201ENST00000428088 C14orf37Q86TY3 774 aa28.58■■■□□ 2.17
AL954642.1-201ENST00000428088 FOXD1Q16676 465 aa28.57■■■□□ 2.16
AL954642.1-201ENST00000428088 SLAIN2Q9P270 581 aa28.56■■■□□ 2.16
AL954642.1-201ENST00000428088 NCOA3Q9Y6Q9 1424 aa28.55■■■□□ 2.16
AL954642.1-201ENST00000428088 METP08581 1390 aa28.52■■■□□ 2.16
AL954642.1-201ENST00000428088 SOCS7O14512 581 aa28.51■■■□□ 2.15
AL954642.1-201ENST00000428088 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.51■■■□□ 2.15
AL954642.1-201ENST00000428088 C19orf44Q9H6X5 657 aa28.5■■■□□ 2.15
AL954642.1-201ENST00000428088 XRN1Q8IZH2 1706 aaKnown RBP28.49■■■□□ 2.15
AL954642.1-201ENST00000428088 MPHOSPH9Q99550 1183 aa28.48■■■□□ 2.15
AL954642.1-201ENST00000428088 PHF23Q9BUL5 403 aaPredicted RBP28.48■■■□□ 2.15
AL954642.1-201ENST00000428088 VGFO15240 615 aaPredicted RBP28.47■■■□□ 2.15
AL954642.1-201ENST00000428088 ATF3P18847 181 aa28.46■■■□□ 2.15
AL954642.1-201ENST00000428088 CADPS2Q86UW7 1296 aa28.46■■■□□ 2.15
AL954642.1-201ENST00000428088 RPGRIP1LQ68CZ1 1315 aa28.44■■■□□ 2.14
AL954642.1-201ENST00000428088 PHLPP1O60346 1717 aa28.43■■■□□ 2.14
AL954642.1-201ENST00000428088 SETD5Q9C0A6 1442 aa28.43■■■□□ 2.14
AL954642.1-201ENST00000428088 PPLO60437 1756 aa28.42■■■□□ 2.14
AL954642.1-201ENST00000428088 CCDC144AA2RUR9 1427 aa28.41■■■□□ 2.14
AL954642.1-201ENST00000428088 SETD1AO15047 1707 aaKnown RBP28.38■■■□□ 2.13
AL954642.1-201ENST00000428088 RGL3Q3MIN7 710 aa28.37■■■□□ 2.13
AL954642.1-201ENST00000428088 ACIN1Q9UKV3 1341 aaKnown RBP28.34■■■□□ 2.13
AL954642.1-201ENST00000428088 DCCP43146 1447 aa28.34■■■□□ 2.13
AL954642.1-201ENST00000428088 SPATA31E1Q6ZUB1 1445 aa28.33■■■□□ 2.13
AL954642.1-201ENST00000428088 RAB3GAP2Q9H2M9 1393 aa28.32■■■□□ 2.12
AL954642.1-201ENST00000428088 COL16A1Q07092 1604 aaPredicted RBP28.32■■■□□ 2.12
AL954642.1-201ENST00000428088 BRINP3Q76B58 766 aa28.31■■■□□ 2.12
AL954642.1-201ENST00000428088 ADGRF5Q8IZF2 1346 aa28.31■■■□□ 2.12
AL954642.1-201ENST00000428088 NALCNQ8IZF0 1738 aa28.3■■■□□ 2.12
AL954642.1-201ENST00000428088 ADGRL3Q9HAR2 1447 aa28.3■■■□□ 2.12
AL954642.1-201ENST00000428088 JCADQ9P266 1359 aa28.3■■■□□ 2.12
AL954642.1-201ENST00000428088 RGS17Q9UGC6 210 aaPredicted RBP28.3■■■□□ 2.12
AL954642.1-201ENST00000428088 MST1RQ04912 1400 aa28.28■■■□□ 2.12
AL954642.1-201ENST00000428088 AHDC1Q5TGY3 1603 aaPredicted RBP28.28■■■□□ 2.12
AL954642.1-201ENST00000428088 ROBO2Q9HCK4 1378 aa28.27■■■□□ 2.12
AL954642.1-201ENST00000428088 IFT172Q9UG01 1749 aa28.27■■■□□ 2.12
AL954642.1-201ENST00000428088 PTCH1Q13635 1447 aa28.26■■■□□ 2.12
AL954642.1-201ENST00000428088 ANKRD30BQ9BXX2 1392 aa28.24■■■□□ 2.11
AL954642.1-201ENST00000428088 ASXL1Q8IXJ9 1541 aa28.23■■■□□ 2.11
AL954642.1-201ENST00000428088 PRAG1Q86YV5 1406 aa28.2■■■□□ 2.11
AL954642.1-201ENST00000428088 STK26Q9P289 416 aa28.17■■■□□ 2.1
AL954642.1-201ENST00000428088 NHSL1Q5SYE7 1610 aa28.17■■■□□ 2.1
AL954642.1-201ENST00000428088 SHPRHQ149N8 1683 aa28.16■■■□□ 2.1
AL954642.1-201ENST00000428088 TMEM132EQ6IEE7 984 aa28.16■■■□□ 2.1
AL954642.1-201ENST00000428088 DDX17Q92841 729 aaKnown RBP28.16■■■□□ 2.1
AL954642.1-201ENST00000428088 PIK3C2GO75747 1445 aa28.16■■■□□ 2.1
AL954642.1-201ENST00000428088 SPATA31A6Q5VVP1 1343 aa28.16■■■□□ 2.1
AL954642.1-201ENST00000428088 C1orf167Q5SNV9 1468 aa28.15■■■□□ 2.1
AL954642.1-201ENST00000428088 POTEAQ6S8J7 498 aa28.15■■■□□ 2.1
AL954642.1-201ENST00000428088 LRP6O75581 1613 aa28.14■■■□□ 2.09
AL954642.1-201ENST00000428088 WAPLQ7Z5K2 1190 aa28.11■■■□□ 2.09
AL954642.1-201ENST00000428088 LRPPRCP42704 1394 aaKnown RBP28.11■■■□□ 2.09
AL954642.1-201ENST00000428088 MEX3CQ5U5Q3 659 aaKnown RBP28.1■■■□□ 2.09
AL954642.1-201ENST00000428088 ORAI2Q96SN7 254 aa28.1■■■□□ 2.09
AL954642.1-201ENST00000428088 HRCP23327 699 aa28.09■■■□□ 2.09
AL954642.1-201ENST00000428088 LRRC59Q96AG4 307 aaKnown RBP28.09■■■□□ 2.09
AL954642.1-201ENST00000428088 ABCC11Q96J66 1382 aa28.08■■■□□ 2.09
AL954642.1-201ENST00000428088 TECPR2O15040 1411 aa28.08■■■□□ 2.09
AL954642.1-201ENST00000428088 NUTM2BA6NNL0 878 aaPredicted RBP28.07■■■□□ 2.08
AL954642.1-201ENST00000428088 NUTM2EB1AL46 878 aaPredicted RBP28.07■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms