RNA–Protein interactions for RNA: ENST00000428012.1

KDM5C-206, Transcript of lysine demethylase 5C, humanhuman

TSL 3

Gene KDM5C, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5C-206ENST00000428012 MYO5BQ9ULV0 1848 aa22.2■■□□□ 1.14
KDM5C-206ENST00000428012 ANKRD30AQ9BXX3 1397 aa22.2■■□□□ 1.14
KDM5C-206ENST00000428012 ZFYVE9O95405 1425 aa22.19■■□□□ 1.14
KDM5C-206ENST00000428012 CHD2O14647 1828 aaKnown RBP22.18■■□□□ 1.14
KDM5C-206ENST00000428012 MSH6P52701 1360 aa22.18■■□□□ 1.14
KDM5C-206ENST00000428012 SLC52A1Q9NWF4 448 aa22.16■■□□□ 1.14
KDM5C-206ENST00000428012 JCADQ9P266 1359 aa22.15■■□□□ 1.14
KDM5C-206ENST00000428012 BCANQ96GW7 911 aa22.15■■□□□ 1.14
KDM5C-206ENST00000428012 COL16A1Q07092 1604 aaPredicted RBP22.15■■□□□ 1.14
KDM5C-206ENST00000428012 LRP6O75581 1613 aa22.13■■□□□ 1.13
KDM5C-206ENST00000428012 PLEKHG1Q9ULL1 1385 aa22.13■■□□□ 1.13
KDM5C-206ENST00000428012 RIMS2Q9UQ26 1411 aa22.12■■□□□ 1.13
KDM5C-206ENST00000428012 GCC2Q8IWJ2 1684 aa22.11■■□□□ 1.13
KDM5C-206ENST00000428012 ADGRL2O95490 1459 aa22.11■■□□□ 1.13
KDM5C-206ENST00000428012 TMEM131LA2VDJ0 1609 aa22.11■■□□□ 1.13
KDM5C-206ENST00000428012 RPRD2Q5VT52 1461 aaKnown RBP22.08■■□□□ 1.12
KDM5C-206ENST00000428012 ADAMTS13Q76LX8 1427 aa22.07■■□□□ 1.12
KDM5C-206ENST00000428012 NUTM2DQ5VT03 806 aaPredicted RBP22.07■■□□□ 1.12
KDM5C-206ENST00000428012 TBX22Q9Y458 520 aa22.07■■□□□ 1.12
KDM5C-206ENST00000428012 ANKRD50Q9ULJ7 1429 aa22.06■■□□□ 1.12
KDM5C-206ENST00000428012 PPP1R15AO75807 674 aaPredicted RBP22.05■■□□□ 1.12
KDM5C-206ENST00000428012 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.05■■□□□ 1.12
KDM5C-206ENST00000428012 APLP2Q06481 763 aa22.04■■□□□ 1.12
KDM5C-206ENST00000428012 UPF1Q92900 1129 aaKnown RBP eCLIP22.03■■□□□ 1.12
KDM5C-206ENST00000428012 NCOA3Q9Y6Q9 1424 aa22.03■■□□□ 1.12
KDM5C-206ENST00000428012 SPATA31A6Q5VVP1 1343 aa22.02■■□□□ 1.12
KDM5C-206ENST00000428012 AHDC1Q5TGY3 1603 aaPredicted RBP22.02■■□□□ 1.11
KDM5C-206ENST00000428012 PTPRUQ92729 1446 aa22■■□□□ 1.11
KDM5C-206ENST00000428012 CHGAP10645 457 aaKnown RBP22■■□□□ 1.11
KDM5C-206ENST00000428012 FAM50AQ14320 339 aaKnown RBP22■■□□□ 1.11
KDM5C-206ENST00000428012 TRIM52Q96A61 297 aa22■■□□□ 1.11
KDM5C-206ENST00000428012 SHPRHQ149N8 1683 aa22■■□□□ 1.11
KDM5C-206ENST00000428012 C14orf37Q86TY3 774 aa21.99■■□□□ 1.11
KDM5C-206ENST00000428012 C19orf44Q9H6X5 657 aa21.99■■□□□ 1.11
KDM5C-206ENST00000428012 E9PCH4 1651 aa21.98■■□□□ 1.11
KDM5C-206ENST00000428012 HDGFP51858 240 aaKnown RBP21.98■■□□□ 1.11
KDM5C-206ENST00000428012 MEX3CQ5U5Q3 659 aaKnown RBP21.98■■□□□ 1.11
KDM5C-206ENST00000428012 DIP2AQ14689 1571 aa21.98■■□□□ 1.11
KDM5C-206ENST00000428012 CADPS2Q86UW7 1296 aa21.97■■□□□ 1.11
KDM5C-206ENST00000428012 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.97■■□□□ 1.11
KDM5C-206ENST00000428012 UNC13BO14795 1591 aa21.96■■□□□ 1.11
KDM5C-206ENST00000428012 ZNF772Q68DY9 489 aaPredicted RBP21.96■■□□□ 1.11
KDM5C-206ENST00000428012 BRINP3Q76B58 766 aa21.96■■□□□ 1.11
KDM5C-206ENST00000428012 ATF3P18847 181 aa21.95■■□□□ 1.1
KDM5C-206ENST00000428012 AMOTL2Q9Y2J4 779 aa21.94■■□□□ 1.1
KDM5C-206ENST00000428012 PIK3R4Q99570 1358 aa21.94■■□□□ 1.1
KDM5C-206ENST00000428012 NUTM2BA6NNL0 878 aaPredicted RBP21.92■■□□□ 1.1
KDM5C-206ENST00000428012 NUTM2EB1AL46 878 aaPredicted RBP21.92■■□□□ 1.1
KDM5C-206ENST00000428012 NUTM2AQ8IVF1 878 aaPredicted RBP21.92■■□□□ 1.1
KDM5C-206ENST00000428012 RXRBP28702 533 aa21.9■■□□□ 1.1
KDM5C-206ENST00000428012 TRPM2O94759 1503 aa21.9■■□□□ 1.1
KDM5C-206ENST00000428012 NRXN3Q9Y4C0 1643 aa21.89■■□□□ 1.09
KDM5C-206ENST00000428012 ASXL1Q8IXJ9 1541 aa21.88■■□□□ 1.09
KDM5C-206ENST00000428012 IQGAP3Q86VI3 1631 aa21.88■■□□□ 1.09
KDM5C-206ENST00000428012 AFF2P51816 1311 aa21.87■■□□□ 1.09
KDM5C-206ENST00000428012 XRN1Q8IZH2 1706 aaKnown RBP21.87■■□□□ 1.09
KDM5C-206ENST00000428012 MST1RQ04912 1400 aa21.87■■□□□ 1.09
KDM5C-206ENST00000428012 DDX17Q92841 729 aaKnown RBP21.86■■□□□ 1.09
KDM5C-206ENST00000428012 CDK12Q9NYV4 1490 aaPredicted RBP21.85■■□□□ 1.09
KDM5C-206ENST00000428012 SRCAPQ6ZRS2 3230 aa21.85■■□□□ 1.09
KDM5C-206ENST00000428012 DCCP43146 1447 aa21.85■■□□□ 1.09
KDM5C-206ENST00000428012 SETD5Q9C0A6 1442 aa21.85■■□□□ 1.09
KDM5C-206ENST00000428012 NHSL1Q5SYE7 1610 aa21.84■■□□□ 1.09
KDM5C-206ENST00000428012 METP08581 1390 aa21.83■■□□□ 1.08
KDM5C-206ENST00000428012 NUP155O75694 1391 aa21.82■■□□□ 1.08
KDM5C-206ENST00000428012 ROCK1Q13464 1354 aa21.81■■□□□ 1.08
KDM5C-206ENST00000428012 SETBP1Q9Y6X0 1596 aa21.81■■□□□ 1.08
KDM5C-206ENST00000428012 RGS12O14924 1447 aa21.8■■□□□ 1.08
KDM5C-206ENST00000428012 PNPLA6Q8IY17 1366 aa21.78■■□□□ 1.08
KDM5C-206ENST00000428012 LRRC59Q96AG4 307 aaKnown RBP21.77■■□□□ 1.08
KDM5C-206ENST00000428012 C8orf37Q96NL8 207 aa21.77■■□□□ 1.08
KDM5C-206ENST00000428012 QTRT2Q9H974 415 aaKnown RBP21.77■■□□□ 1.08
KDM5C-206ENST00000428012 NALCNQ8IZF0 1738 aa21.75■■□□□ 1.07
KDM5C-206ENST00000428012 ADGRL3Q9HAR2 1447 aa21.74■■□□□ 1.07
KDM5C-206ENST00000428012 SPHKAPQ2M3C7 1700 aa21.74■■□□□ 1.07
KDM5C-206ENST00000428012 RBM6P78332 1123 aaKnown RBP21.73■■□□□ 1.07
KDM5C-206ENST00000428012 ITGAEP38570 1179 aa21.71■■□□□ 1.07
KDM5C-206ENST00000428012 ZNF326Q5BKZ1 582 aaKnown RBP21.71■■□□□ 1.07
KDM5C-206ENST00000428012 NEXMIFQ5QGS0 1516 aa21.7■■□□□ 1.07
KDM5C-206ENST00000428012 C1orf167Q5SNV9 1468 aa21.7■■□□□ 1.06
KDM5C-206ENST00000428012 ADAMTS2O95450 1211 aa21.69■■□□□ 1.06
KDM5C-206ENST00000428012 CLTCL1P53675 1640 aa21.69■■□□□ 1.06
KDM5C-206ENST00000428012 ORAI2Q96SN7 254 aa21.67■■□□□ 1.06
KDM5C-206ENST00000428012 LAMC1P11047 1609 aa21.66■■□□□ 1.06
KDM5C-206ENST00000428012 NGLY1Q96IV0 654 aa21.66■■□□□ 1.06
KDM5C-206ENST00000428012 ROBO2Q9HCK4 1378 aa21.64■■□□□ 1.06
KDM5C-206ENST00000428012 SOS2Q07890 1332 aaPredicted RBP21.64■■□□□ 1.05
KDM5C-206ENST00000428012 EP400Q96L91 3159 aa21.63■■□□□ 1.05
KDM5C-206ENST00000428012 PPARGC1BQ86YN6 1023 aaKnown RBP21.6■■□□□ 1.05
KDM5C-206ENST00000428012 USP21Q9UK80 565 aa21.6■■□□□ 1.05
KDM5C-206ENST00000428012 PTCH1Q13635 1447 aa21.6■■□□□ 1.05
KDM5C-206ENST00000428012 FNBP4Q8N3X1 1017 aaPredicted RBP21.59■■□□□ 1.05
KDM5C-206ENST00000428012 ATRNO75882 1429 aa21.57■■□□□ 1.04
KDM5C-206ENST00000428012 ATAD2Q6PL18 1390 aa21.57■■□□□ 1.04
KDM5C-206ENST00000428012 KIF1BO60333 1816 aa21.57■■□□□ 1.04
KDM5C-206ENST00000428012 TRPC5Q9UL62 973 aaPredicted RBP21.56■■□□□ 1.04
KDM5C-206ENST00000428012 COL22A1Q8NFW1 1626 aaPredicted RBP21.55■■□□□ 1.04
KDM5C-206ENST00000428012 PRAG1Q86YV5 1406 aa21.54■■□□□ 1.04
KDM5C-206ENST00000428012 MYOM2P54296 1465 aa21.53■■□□□ 1.04
KDM5C-206ENST00000428012 BCL9LQ86UU0 1499 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms