RNA–Protein interactions for RNA: ENST00000427795.2

XPC-202, Transcript of XPC complex subunit, DNA damage recognition and repair factor, humanhuman

TSL 2

Gene XPC, Length 820 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPC-202ENST00000427795 UPF1Q92900 1129 aaKnown RBP eCLIP19.46■□□□□ 0.71
XPC-202ENST00000427795 KANK1Q14678 1352 aa19.45■□□□□ 0.7
XPC-202ENST00000427795 MYO5BQ9ULV0 1848 aa19.44■□□□□ 0.7
XPC-202ENST00000427795 PTPN23Q9H3S7 1636 aa19.43■□□□□ 0.7
XPC-202ENST00000427795 ZFYVE9O95405 1425 aa19.43■□□□□ 0.7
XPC-202ENST00000427795 DAPK1P53355 1430 aa19.43■□□□□ 0.7
XPC-202ENST00000427795 TRIM52Q96A61 297 aa19.41■□□□□ 0.7
XPC-202ENST00000427795 BCANQ96GW7 911 aa19.4■□□□□ 0.7
XPC-202ENST00000427795 SPATA31A6Q5VVP1 1343 aa19.4■□□□□ 0.7
XPC-202ENST00000427795 PLEKHG1Q9ULL1 1385 aa19.4■□□□□ 0.7
XPC-202ENST00000427795 FGD6Q6ZV73 1430 aa19.4■□□□□ 0.7
XPC-202ENST00000427795 SHPRHQ149N8 1683 aa19.4■□□□□ 0.7
XPC-202ENST00000427795 AHDC1Q5TGY3 1603 aaPredicted RBP19.39■□□□□ 0.69
XPC-202ENST00000427795 SLC52A1Q9NWF4 448 aa19.38■□□□□ 0.69
XPC-202ENST00000427795 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.37■□□□□ 0.69
XPC-202ENST00000427795 GCC2Q8IWJ2 1684 aa19.37■□□□□ 0.69
XPC-202ENST00000427795 ZNF772Q68DY9 489 aaPredicted RBP19.37■□□□□ 0.69
XPC-202ENST00000427795 RIMS2Q9UQ26 1411 aa19.36■□□□□ 0.69
XPC-202ENST00000427795 MEX3CQ5U5Q3 659 aaKnown RBP19.36■□□□□ 0.69
XPC-202ENST00000427795 CHIC2Q9UKJ5 165 aa19.36■□□□□ 0.69
XPC-202ENST00000427795 TMEM131LA2VDJ0 1609 aa19.35■□□□□ 0.69
XPC-202ENST00000427795 DIP2AQ14689 1571 aa19.35■□□□□ 0.69
XPC-202ENST00000427795 NCOA3Q9Y6Q9 1424 aa19.34■□□□□ 0.69
XPC-202ENST00000427795 ANKRD30AQ9BXX3 1397 aa19.34■□□□□ 0.69
XPC-202ENST00000427795 ADAMTS13Q76LX8 1427 aa19.33■□□□□ 0.68
XPC-202ENST00000427795 TBX22Q9Y458 520 aa19.32■□□□□ 0.68
XPC-202ENST00000427795 RPRD2Q5VT52 1461 aaKnown RBP19.32■□□□□ 0.68
XPC-202ENST00000427795 PPP1R15AO75807 674 aaPredicted RBP19.31■□□□□ 0.68
XPC-202ENST00000427795 RXRBP28702 533 aa19.31■□□□□ 0.68
XPC-202ENST00000427795 CDK12Q9NYV4 1490 aaPredicted RBP19.3■□□□□ 0.68
XPC-202ENST00000427795 C14orf37Q86TY3 774 aa19.3■□□□□ 0.68
XPC-202ENST00000427795 CADPS2Q86UW7 1296 aa19.29■□□□□ 0.68
XPC-202ENST00000427795 C19orf44Q9H6X5 657 aa19.29■□□□□ 0.68
XPC-202ENST00000427795 LOC105371045A0A1W2PR82 267 aa19.28■□□□□ 0.68
XPC-202ENST00000427795 BRINP3Q76B58 766 aa19.28■□□□□ 0.68
XPC-202ENST00000427795 ADGRL2O95490 1459 aa19.28■□□□□ 0.68
XPC-202ENST00000427795 NUTM2BA6NNL0 878 aaPredicted RBP19.27■□□□□ 0.68
XPC-202ENST00000427795 NUTM2EB1AL46 878 aaPredicted RBP19.27■□□□□ 0.68
XPC-202ENST00000427795 ATF3P18847 181 aa19.27■□□□□ 0.68
XPC-202ENST00000427795 NUTM2DQ5VT03 806 aaPredicted RBP19.27■□□□□ 0.68
XPC-202ENST00000427795 NUTM2AQ8IVF1 878 aaPredicted RBP19.27■□□□□ 0.68
XPC-202ENST00000427795 EP400Q96L91 3159 aa19.26■□□□□ 0.67
XPC-202ENST00000427795 AFF2P51816 1311 aa19.25■□□□□ 0.67
XPC-202ENST00000427795 PTPRUQ92729 1446 aa19.25■□□□□ 0.67
XPC-202ENST00000427795 ASXL1Q8IXJ9 1541 aa19.24■□□□□ 0.67
XPC-202ENST00000427795 RGS12O14924 1447 aa19.24■□□□□ 0.67
XPC-202ENST00000427795 PIK3R4Q99570 1358 aa19.23■□□□□ 0.67
XPC-202ENST00000427795 HDGFP51858 240 aaKnown RBP19.23■□□□□ 0.67
XPC-202ENST00000427795 ANKRD50Q9ULJ7 1429 aa19.23■□□□□ 0.67
XPC-202ENST00000427795 NHSL1Q5SYE7 1610 aa19.22■□□□□ 0.67
XPC-202ENST00000427795 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.22■□□□□ 0.67
XPC-202ENST00000427795 E9PCH4 1651 aa19.21■□□□□ 0.67
XPC-202ENST00000427795 CHGAP10645 457 aaKnown RBP19.21■□□□□ 0.67
XPC-202ENST00000427795 SETD5Q9C0A6 1442 aa19.21■□□□□ 0.67
XPC-202ENST00000427795 TRPM2O94759 1503 aa19.2■□□□□ 0.66
XPC-202ENST00000427795 UNC13BO14795 1591 aa19.2■□□□□ 0.66
XPC-202ENST00000427795 AMOTL2Q9Y2J4 779 aa19.2■□□□□ 0.66
XPC-202ENST00000427795 DCCP43146 1447 aa19.19■□□□□ 0.66
XPC-202ENST00000427795 XRN1Q8IZH2 1706 aaKnown RBP19.19■□□□□ 0.66
XPC-202ENST00000427795 MST1RQ04912 1400 aa19.18■□□□□ 0.66
XPC-202ENST00000427795 NRXN3Q9Y4C0 1643 aa19.18■□□□□ 0.66
XPC-202ENST00000427795 DDX17Q92841 729 aaKnown RBP19.16■□□□□ 0.66
XPC-202ENST00000427795 C8orf37Q96NL8 207 aa19.15■□□□□ 0.66
XPC-202ENST00000427795 QTRT2Q9H974 415 aaKnown RBP19.15■□□□□ 0.66
XPC-202ENST00000427795 RBM6P78332 1123 aaKnown RBP19.14■□□□□ 0.65
XPC-202ENST00000427795 PNPLA6Q8IY17 1366 aa19.14■□□□□ 0.65
XPC-202ENST00000427795 APLP2Q06481 763 aa19.12■□□□□ 0.65
XPC-202ENST00000427795 LRRC59Q96AG4 307 aaKnown RBP19.12■□□□□ 0.65
XPC-202ENST00000427795 SETBP1Q9Y6X0 1596 aa19.11■□□□□ 0.65
XPC-202ENST00000427795 FAM50AQ14320 339 aaKnown RBP19.11■□□□□ 0.65
XPC-202ENST00000427795 IQGAP3Q86VI3 1631 aa19.11■□□□□ 0.65
XPC-202ENST00000427795 NALCNQ8IZF0 1738 aa19.1■□□□□ 0.65
XPC-202ENST00000427795 METP08581 1390 aa19.09■□□□□ 0.65
XPC-202ENST00000427795 ADGRL3Q9HAR2 1447 aa19.08■□□□□ 0.64
XPC-202ENST00000427795 ADAMTS2O95450 1211 aa19.07■□□□□ 0.64
XPC-202ENST00000427795 LAMC1P11047 1609 aa19.06■□□□□ 0.64
XPC-202ENST00000427795 ATAD2Q6PL18 1390 aa19.06■□□□□ 0.64
XPC-202ENST00000427795 NGLY1Q96IV0 654 aa19.05■□□□□ 0.64
XPC-202ENST00000427795 C1orf167Q5SNV9 1468 aa19.02■□□□□ 0.63
XPC-202ENST00000427795 SPHKAPQ2M3C7 1700 aa19■□□□□ 0.63
XPC-202ENST00000427795 USP21Q9UK80 565 aa19■□□□□ 0.63
XPC-202ENST00000427795 NUP155O75694 1391 aa19■□□□□ 0.63
XPC-202ENST00000427795 ATRNO75882 1429 aa18.99■□□□□ 0.63
XPC-202ENST00000427795 SOS2Q07890 1332 aaPredicted RBP18.99■□□□□ 0.63
XPC-202ENST00000427795 ROCK1Q13464 1354 aa18.98■□□□□ 0.63
XPC-202ENST00000427795 FNBP4Q8N3X1 1017 aaPredicted RBP18.98■□□□□ 0.63
XPC-202ENST00000427795 NEXMIFQ5QGS0 1516 aa18.97■□□□□ 0.63
XPC-202ENST00000427795 ORAI2Q96SN7 254 aa18.97■□□□□ 0.63
XPC-202ENST00000427795 ZRANB1Q9UGI0 708 aa18.97■□□□□ 0.63
XPC-202ENST00000427795 TRPC5Q9UL62 973 aaPredicted RBP18.97■□□□□ 0.63
XPC-202ENST00000427795 COL22A1Q8NFW1 1626 aaPredicted RBP18.96■□□□□ 0.63
XPC-202ENST00000427795 ZNF326Q5BKZ1 582 aaKnown RBP18.96■□□□□ 0.63
XPC-202ENST00000427795 PTCH1Q13635 1447 aa18.96■□□□□ 0.63
XPC-202ENST00000427795 ROBO2Q9HCK4 1378 aa18.93■□□□□ 0.62
XPC-202ENST00000427795 CLTCL1P53675 1640 aa18.93■□□□□ 0.62
XPC-202ENST00000427795 MYOM2P54296 1465 aa18.92■□□□□ 0.62
XPC-202ENST00000427795 BCL9LQ86UU0 1499 aa18.92■□□□□ 0.62
XPC-202ENST00000427795 MARF1Q9Y4F3 1742 aaKnown RBP18.9■□□□□ 0.62
XPC-202ENST00000427795 PRAG1Q86YV5 1406 aa18.87■□□□□ 0.61
XPC-202ENST00000427795 CCDC125Q86Z20 511 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms