RNA–Protein interactions for RNA: ENST00000427276.1

LINC01108-201, Transcript of long intergenic non-protein coding RNA 1108, humanhuman

TSL 2 BASIC

Gene LINC01108, Length 3,152 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01108-201ENST00000427276 MFAP1P55081 439 aaKnown RBP9.59□□□□□ -0.87
LINC01108-201ENST00000427276 PANK2Q9BZ23 570 aa9.58□□□□□ -0.88
LINC01108-201ENST00000427276 NUP153P49790 1475 aaKnown RBP9.58□□□□□ -0.88
LINC01108-201ENST00000427276 SLFN5Q08AF3 891 aa9.58□□□□□ -0.88
LINC01108-201ENST00000427276 KIAA0586Q9BVV6 1533 aa9.58□□□□□ -0.88
LINC01108-201ENST00000427276 KIF14Q15058 1648 aa9.58□□□□□ -0.88
LINC01108-201ENST00000427276 C14orf37Q86TY3 774 aa9.57□□□□□ -0.88
LINC01108-201ENST00000427276 CENPJQ9HC77 1338 aaPredicted RBP9.57□□□□□ -0.88
LINC01108-201ENST00000427276 DMRT2Q9Y5R5 561 aa9.57□□□□□ -0.88
LINC01108-201ENST00000427276 TESK2Q96S53 571 aa9.57□□□□□ -0.88
LINC01108-201ENST00000427276 GLIPR1L2Q4G1C9 344 aa9.56□□□□□ -0.88
LINC01108-201ENST00000427276 FOXD4L1Q9NU39 408 aa9.56□□□□□ -0.88
LINC01108-201ENST00000427276 TNNQ9UQP3 1299 aa9.56□□□□□ -0.88
LINC01108-201ENST00000427276 C9orf84Q5VXU9 1444 aa9.56□□□□□ -0.88
LINC01108-201ENST00000427276 PLB1Q6P1J6 1458 aa9.56□□□□□ -0.88
LINC01108-201ENST00000427276 PBRM1Q86U86 1689 aa9.56□□□□□ -0.88
LINC01108-201ENST00000427276 TROQ12816 1431 aaPredicted RBP9.55□□□□□ -0.88
LINC01108-201ENST00000427276 ERBINQ96RT1 1412 aa9.55□□□□□ -0.88
LINC01108-201ENST00000427276 HSP90AA1P07900 732 aaKnown RBP9.55□□□□□ -0.88
LINC01108-201ENST00000427276 GPATCH8Q9UKJ3 1502 aaKnown RBP9.55□□□□□ -0.88
LINC01108-201ENST00000427276 TBC1D2Q9BYX2 928 aa9.54□□□□□ -0.88
LINC01108-201ENST00000427276 UHRF1BP1Q6BDS2 1440 aa9.54□□□□□ -0.88
LINC01108-201ENST00000427276 E9PSI1 815 aa9.54□□□□□ -0.88
LINC01108-201ENST00000427276 TRIM44Q96DX7 344 aaPredicted RBP9.54□□□□□ -0.88
LINC01108-201ENST00000427276 PDZRN3Q9UPQ7 1066 aa9.54□□□□□ -0.88
LINC01108-201ENST00000427276 XRCC6P12956 609 aaKnown RBP eCLIP9.53□□□□□ -0.88
LINC01108-201ENST00000427276 CHGAP10645 457 aaKnown RBP9.53□□□□□ -0.88
LINC01108-201ENST00000427276 HSP90AA2PQ14568 343 aaPredicted RBP9.53□□□□□ -0.88
LINC01108-201ENST00000427276 CGNL1Q0VF96 1302 aa9.53□□□□□ -0.88
LINC01108-201ENST00000427276 MAPK8IP3Q9UPT6 1336 aa9.53□□□□□ -0.88
LINC01108-201ENST00000427276 FTSJ3Q8IY81 847 aaKnown RBP9.53□□□□□ -0.88
LINC01108-201ENST00000427276 DISP1Q96F81 1524 aa9.53□□□□□ -0.88
LINC01108-201ENST00000427276 JPH4Q96JJ6 628 aa9.52□□□□□ -0.89
LINC01108-201ENST00000427276 BLMP54132 1417 aaPredicted RBP9.52□□□□□ -0.89
LINC01108-201ENST00000427276 USP19O94966 1318 aa9.52□□□□□ -0.89
LINC01108-201ENST00000427276 TRAK2O60296 914 aa9.51□□□□□ -0.89
LINC01108-201ENST00000427276 MYH16Q9H6N6 1097 aa9.51□□□□□ -0.89
LINC01108-201ENST00000427276 PRAG1Q86YV5 1406 aa9.51□□□□□ -0.89
LINC01108-201ENST00000427276 PKNOX2Q96KN3 472 aa9.51□□□□□ -0.89
LINC01108-201ENST00000427276 PCDHB15Q9Y5E8 787 aa9.51□□□□□ -0.89
LINC01108-201ENST00000427276 ADAMTS12P58397 1594 aa9.51□□□□□ -0.89
LINC01108-201ENST00000427276 ZMYM4Q5VZL5 1548 aa9.51□□□□□ -0.89
LINC01108-201ENST00000427276 MCM4P33991 863 aa9.51□□□□□ -0.89
LINC01108-201ENST00000427276 CDCA8Q53HL2 280 aa9.51□□□□□ -0.89
LINC01108-201ENST00000427276 ARID3AQ99856 593 aa9.51□□□□□ -0.89
LINC01108-201ENST00000427276 HSCBQ8IWL3 235 aa9.5□□□□□ -0.89
LINC01108-201ENST00000427276 PMFBP1Q8TBY8 1022 aa9.5□□□□□ -0.89
LINC01108-201ENST00000427276 RLBP1P12271 317 aa9.49□□□□□ -0.89
LINC01108-201ENST00000427276 RWDD1Q9H446 243 aaPredicted RBP9.49□□□□□ -0.89
LINC01108-201ENST00000427276 KIAA0556O60303 1618 aa9.49□□□□□ -0.89
LINC01108-201ENST00000427276 RAPGEF6Q8TEU7 1601 aa9.49□□□□□ -0.89
LINC01108-201ENST00000427276 C22orf23Q9BZE7 217 aa9.49□□□□□ -0.89
LINC01108-201ENST00000427276 MORC1Q86VD1 984 aa9.49□□□□□ -0.89
LINC01108-201ENST00000427276 GRIN2AQ12879 1464 aa9.48□□□□□ -0.89
LINC01108-201ENST00000427276 HSP90AB1P08238 724 aaKnown RBP9.48□□□□□ -0.89
LINC01108-201ENST00000427276 NCLP19338 710 aaKnown RBP9.48□□□□□ -0.89
LINC01108-201ENST00000427276 NKTRP30414 1462 aaKnown RBP9.48□□□□□ -0.89
LINC01108-201ENST00000427276 PDE3AQ14432 1141 aa9.48□□□□□ -0.89
LINC01108-201ENST00000427276 ITPRIPQ8IWB1 547 aa9.48□□□□□ -0.89
LINC01108-201ENST00000427276 WWC1Q8IX03 1113 aa9.48□□□□□ -0.89
LINC01108-201ENST00000427276 PLCB2Q00722 1185 aa9.47□□□□□ -0.89
LINC01108-201ENST00000427276 PDE4CQ08493 712 aa9.47□□□□□ -0.89
LINC01108-201ENST00000427276 TBC1D32Q96NH3 1257 aa9.47□□□□□ -0.89
LINC01108-201ENST00000427276 CHMP5Q9NZZ3 219 aa9.47□□□□□ -0.89
LINC01108-201ENST00000427276 PLEKHH2Q8IVE3 1493 aa9.47□□□□□ -0.89
LINC01108-201ENST00000427276 COL17A1Q9UMD9 1497 aaPredicted RBP9.47□□□□□ -0.89
LINC01108-201ENST00000427276 ZBTB7CA1YPR0 619 aa9.47□□□□□ -0.89
LINC01108-201ENST00000427276 DHX37Q8IY37 1157 aaKnown RBP9.47□□□□□ -0.89
LINC01108-201ENST00000427276 ZNF521Q96K83 1311 aa9.47□□□□□ -0.89
LINC01108-201ENST00000427276 TCP11L2Q8N4U5 519 aa9.47□□□□□ -0.89
LINC01108-201ENST00000427276 EIF3AQ14152 1382 aaKnown RBP9.46□□□□□ -0.89
LINC01108-201ENST00000427276 ARHGEF12Q9NZN5 1544 aa9.46□□□□□ -0.89
LINC01108-201ENST00000427276 NUP160Q12769 1436 aa9.46□□□□□ -0.89
LINC01108-201ENST00000427276 U2SURPO15042 1029 aaKnown RBP9.46□□□□□ -0.9
LINC01108-201ENST00000427276 U2AF1L5P0DN76 240 aaPredicted RBP9.46□□□□□ -0.9
LINC01108-201ENST00000427276 U2AF1Q01081 240 aaKnown RBP eCLIP9.46□□□□□ -0.9
LINC01108-201ENST00000427276 ZMYND15Q9H091 742 aa9.46□□□□□ -0.9
LINC01108-201ENST00000427276 ADGBQ8N7X0 1667 aa9.45□□□□□ -0.9
LINC01108-201ENST00000427276 RARSP54136 660 aaKnown RBP9.45□□□□□ -0.9
LINC01108-201ENST00000427276 TSR2Q969E8 191 aaKnown RBP9.45□□□□□ -0.9
LINC01108-201ENST00000427276 SMC4Q9NTJ3 1288 aa9.45□□□□□ -0.9
LINC01108-201ENST00000427276 ADGRL2O95490 1459 aa9.45□□□□□ -0.9
LINC01108-201ENST00000427276 MAGI2Q86UL8 1455 aa9.45□□□□□ -0.9
LINC01108-201ENST00000427276 ERCC6L2Q5T890 1561 aa9.45□□□□□ -0.9
LINC01108-201ENST00000427276 CFAP70Q5T0N1 1121 aa9.45□□□□□ -0.9
LINC01108-201ENST00000427276 ANTXR1Q9H6X2 564 aa9.45□□□□□ -0.9
LINC01108-201ENST00000427276 GRPEL1Q9HAV7 217 aa9.45□□□□□ -0.9
LINC01108-201ENST00000427276 A2MP01023 1474 aa9.45□□□□□ -0.9
LINC01108-201ENST00000427276 CEP170Q5SW79 1584 aa9.45□□□□□ -0.9
LINC01108-201ENST00000427276 E9PCH4 1651 aa9.44□□□□□ -0.9
LINC01108-201ENST00000427276 MRE11P49959 708 aa9.44□□□□□ -0.9
LINC01108-201ENST00000427276 CARMIL2Q6F5E8 1435 aa9.44□□□□□ -0.9
LINC01108-201ENST00000427276 ESPNB1AK53 854 aa9.44□□□□□ -0.9
LINC01108-201ENST00000427276 SAFB2Q14151 953 aaKnown RBP eCLIP9.44□□□□□ -0.9
LINC01108-201ENST00000427276 LNPKQ9C0E8 428 aa9.44□□□□□ -0.9
LINC01108-201ENST00000427276 ANP32BQ92688 251 aaKnown RBP9.43□□□□□ -0.9
LINC01108-201ENST00000427276 TRAK1Q9UPV9 953 aa9.43□□□□□ -0.9
LINC01108-201ENST00000427276 FAM135AQ9P2D6 1515 aa9.43□□□□□ -0.9
LINC01108-201ENST00000427276 CLCN1P35523 988 aa9.42□□□□□ -0.9
LINC01108-201ENST00000427276 DZIP1LQ8IYY4 767 aaKnown RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms