RNA–Protein interactions for RNA: ENST00000427123.5

SNX17-202, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 2,007 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-202ENST00000427123 EIF3AQ14152 1382 aaKnown RBP26.01■■□□□ 1.75
SNX17-202ENST00000427123 NUDCQ9Y266 331 aa26■■□□□ 1.75
SNX17-202ENST00000427123 PANK3Q9H999 370 aa25.99■■□□□ 1.75
SNX17-202ENST00000427123 ADGRB3O60242 1522 aa25.98■■□□□ 1.75
SNX17-202ENST00000427123 CDCA8Q53HL2 280 aa25.97■■□□□ 1.75
SNX17-202ENST00000427123 NRXN1Q9ULB1 1477 aa25.96■■□□□ 1.75
SNX17-202ENST00000427123 ZMYM4Q5VZL5 1548 aa25.95■■□□□ 1.75
SNX17-202ENST00000427123 PPP4R2Q9NY27 417 aa25.95■■□□□ 1.74
SNX17-202ENST00000427123 MYOM1P52179 1685 aa25.94■■□□□ 1.74
SNX17-202ENST00000427123 KDM5AP29375 1690 aaKnown RBP25.94■■□□□ 1.74
SNX17-202ENST00000427123 INSRP06213 1382 aa25.92■■□□□ 1.74
SNX17-202ENST00000427123 ABCC3O15438 1527 aa25.92■■□□□ 1.74
SNX17-202ENST00000427123 NPATQ14207 1427 aa25.92■■□□□ 1.74
SNX17-202ENST00000427123 CAMSAP1Q5T5Y3 1602 aa25.91■■□□□ 1.74
SNX17-202ENST00000427123 CC2D1BQ5T0F9 858 aaKnown RBP25.9■■□□□ 1.74
SNX17-202ENST00000427123 MYO3AQ8NEV4 1616 aa25.9■■□□□ 1.74
SNX17-202ENST00000427123 DIP2CQ9Y2E4 1556 aa25.89■■□□□ 1.74
SNX17-202ENST00000427123 PPLO60437 1756 aa25.89■■□□□ 1.74
SNX17-202ENST00000427123 RICTORQ6R327 1708 aa25.89■■□□□ 1.73
SNX17-202ENST00000427123 SETBP1Q9Y6X0 1596 aa25.88■■□□□ 1.73
SNX17-202ENST00000427123 RNF123Q5XPI4 1314 aa25.88■■□□□ 1.73
SNX17-202ENST00000427123 ADGRF5Q8IZF2 1346 aa25.88■■□□□ 1.73
SNX17-202ENST00000427123 SLC24A1O60721 1099 aa25.86■■□□□ 1.73
SNX17-202ENST00000427123 BLMP54132 1417 aaPredicted RBP25.85■■□□□ 1.73
SNX17-202ENST00000427123 ZC3H13Q5T200 1668 aaKnown RBP25.84■■□□□ 1.73
SNX17-202ENST00000427123 CFAP70Q5T0N1 1121 aa25.84■■□□□ 1.73
SNX17-202ENST00000427123 ASXL1Q8IXJ9 1541 aa25.84■■□□□ 1.73
SNX17-202ENST00000427123 NOS1P29475 1434 aa25.84■■□□□ 1.73
SNX17-202ENST00000427123 KNSTRNQ9Y448 316 aa25.83■■□□□ 1.73
SNX17-202ENST00000427123 GLI2P10070 1586 aa25.83■■□□□ 1.72
SNX17-202ENST00000427123 GGT6Q6P531 493 aa25.82■■□□□ 1.72
SNX17-202ENST00000427123 CFAP65Q6ZU64 1925 aaKnown RBP25.81■■□□□ 1.72
SNX17-202ENST00000427123 ERVK-7P63135 1459 aa25.81■■□□□ 1.72
SNX17-202ENST00000427123 PIK3C2BO00750 1634 aa25.81■■□□□ 1.72
SNX17-202ENST00000427123 SIGLEC1Q9BZZ2 1709 aa25.8■■□□□ 1.72
SNX17-202ENST00000427123 PIK3C2GO75747 1445 aa25.8■■□□□ 1.72
SNX17-202ENST00000427123 NPC1L1Q9UHC9 1359 aa25.79■■□□□ 1.72
SNX17-202ENST00000427123 SBNO2Q9Y2G9 1366 aa25.79■■□□□ 1.72
SNX17-202ENST00000427123 RAPGEF3O95398 923 aa25.78■■□□□ 1.72
SNX17-202ENST00000427123 PDE3BQ13370 1112 aa25.78■■□□□ 1.72
SNX17-202ENST00000427123 AMER1Q5JTC6 1135 aaPredicted RBP25.78■■□□□ 1.72
SNX17-202ENST00000427123 SENP3-EIF4A1A0A087X0R7 540 aa25.76■■□□□ 1.72
SNX17-202ENST00000427123 RPGRIP1LQ68CZ1 1315 aa25.76■■□□□ 1.71
SNX17-202ENST00000427123 CHGAP10645 457 aaKnown RBP25.75■■□□□ 1.71
SNX17-202ENST00000427123 ARHGAP31Q2M1Z3 1444 aa25.74■■□□□ 1.71
SNX17-202ENST00000427123 ADGRB1O14514 1584 aa25.73■■□□□ 1.71
SNX17-202ENST00000427123 PPP2R1AP30153 589 aa25.72■■□□□ 1.71
SNX17-202ENST00000427123 RBM19Q9Y4C8 960 aaKnown RBP25.72■■□□□ 1.71
SNX17-202ENST00000427123 QRICH2Q9H0J4 1663 aa25.72■■□□□ 1.71
SNX17-202ENST00000427123 B4GALNT3Q6L9W6 998 aa25.7■■□□□ 1.7
SNX17-202ENST00000427123 C14orf93Q9H972 538 aaKnown RBP25.7■■□□□ 1.7
SNX17-202ENST00000427123 NEXMIFQ5QGS0 1516 aa25.68■■□□□ 1.7
SNX17-202ENST00000427123 YEATS2Q9ULM3 1422 aa25.68■■□□□ 1.7
SNX17-202ENST00000427123 CENPJQ9HC77 1338 aaPredicted RBP25.68■■□□□ 1.7
SNX17-202ENST00000427123 RIMBP3CA6NJZ7 1639 aa25.67■■□□□ 1.7
SNX17-202ENST00000427123 RIMBP3BA6NNM3 1639 aa25.67■■□□□ 1.7
SNX17-202ENST00000427123 RIMBP3Q9UFD9 1639 aa25.67■■□□□ 1.7
SNX17-202ENST00000427123 DIP2BQ9P265 1576 aa25.64■■□□□ 1.7
SNX17-202ENST00000427123 SALL2Q9Y467 1007 aaPredicted RBP25.64■■□□□ 1.69
SNX17-202ENST00000427123 PREX1Q8TCU6 1659 aa25.63■■□□□ 1.69
SNX17-202ENST00000427123 RCAN3Q9UKA8 241 aa25.62■■□□□ 1.69
SNX17-202ENST00000427123 RRP1P56182 461 aaKnown RBP25.61■■□□□ 1.69
SNX17-202ENST00000427123 WDR43Q15061 677 aaKnown RBP eCLIP25.61■■□□□ 1.69
SNX17-202ENST00000427123 CYB5RLQ6IPT4 315 aa25.61■■□□□ 1.69
SNX17-202ENST00000427123 ARHGEF28Q8N1W1 1705 aaKnown RBP25.61■■□□□ 1.69
SNX17-202ENST00000427123 ADAMTS8Q9UP79 889 aa25.6■■□□□ 1.69
SNX17-202ENST00000427123 TRAK1Q9UPV9 953 aa25.58■■□□□ 1.69
SNX17-202ENST00000427123 VGFO15240 615 aaPredicted RBP25.58■■□□□ 1.68
SNX17-202ENST00000427123 ZFYVE9O95405 1425 aa25.57■■□□□ 1.68
SNX17-202ENST00000427123 USP32Q8NFA0 1604 aa25.56■■□□□ 1.68
SNX17-202ENST00000427123 MYO5BQ9ULV0 1848 aa25.56■■□□□ 1.68
SNX17-202ENST00000427123 CDCA7LQ96GN5 454 aa25.56■■□□□ 1.68
SNX17-202ENST00000427123 CCDC136Q96JN2 1154 aa25.56■■□□□ 1.68
SNX17-202ENST00000427123 SLC52A1Q9NWF4 448 aa25.56■■□□□ 1.68
SNX17-202ENST00000427123 REREQ9P2R6 1566 aa25.56■■□□□ 1.68
SNX17-202ENST00000427123 TMEM131LA2VDJ0 1609 aa25.55■■□□□ 1.68
SNX17-202ENST00000427123 CARD14Q9BXL6 1004 aa25.55■■□□□ 1.68
SNX17-202ENST00000427123 TMEM132EQ6IEE7 984 aa25.53■■□□□ 1.68
SNX17-202ENST00000427123 FAM69CQ0P6D2 419 aa25.51■■□□□ 1.67
SNX17-202ENST00000427123 IDI1Q13907 227 aa25.51■■□□□ 1.67
SNX17-202ENST00000427123 TSPOAP1O95153 1857 aa25.5■■□□□ 1.67
SNX17-202ENST00000427123 NSD3Q9BZ95 1437 aa25.5■■□□□ 1.67
SNX17-202ENST00000427123 AGLP35573 1532 aa25.49■■□□□ 1.67
SNX17-202ENST00000427123 PUS7Q96PZ0 661 aaKnown RBP25.49■■□□□ 1.67
SNX17-202ENST00000427123 PLEKHH1Q9ULM0 1364 aa25.48■■□□□ 1.67
SNX17-202ENST00000427123 TULP4Q9NRJ4 1543 aa25.48■■□□□ 1.67
SNX17-202ENST00000427123 MYT1Q01538 1121 aa25.48■■□□□ 1.67
SNX17-202ENST00000427123 ZNF521Q96K83 1311 aa25.46■■□□□ 1.67
SNX17-202ENST00000427123 FANCIQ9NVI1 1328 aa25.45■■□□□ 1.66
SNX17-202ENST00000427123 NUTM2DQ5VT03 806 aaPredicted RBP25.44■■□□□ 1.66
SNX17-202ENST00000427123 EVC2Q86UK5 1308 aa25.44■■□□□ 1.66
SNX17-202ENST00000427123 POLR3AO14802 1390 aaPredicted RBP25.44■■□□□ 1.66
SNX17-202ENST00000427123 EXOC6Q8TAG9 804 aa25.42■■□□□ 1.66
SNX17-202ENST00000427123 SLC12A5Q9H2X9 1139 aa25.41■■□□□ 1.66
SNX17-202ENST00000427123 SHPRHQ149N8 1683 aa25.41■■□□□ 1.66
SNX17-202ENST00000427123 PPP6R1Q9UPN7 881 aa25.4■■□□□ 1.66
SNX17-202ENST00000427123 CLTCQ00610 1675 aaKnown RBP25.4■■□□□ 1.66
SNX17-202ENST00000427123 GOLGA2Q08379 1002 aa25.39■■□□□ 1.66
SNX17-202ENST00000427123 ANKRD36BQ8N2N9 1353 aa25.39■■□□□ 1.65
SNX17-202ENST00000427123 DUSP27Q5VZP5 1158 aa25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms