RNA–Protein interactions for RNA: ENST00000426856.1

CRIM1-203, Transcript of cysteine rich transmembrane BMP regulator 1, humanhuman

TSL 3

Gene CRIM1, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIM1-203ENST00000426856 ZFYVE9O95405 1425 aa23.56■■□□□ 1.36
CRIM1-203ENST00000426856 RBM33Q96EV2 1170 aaKnown RBP23.55■■□□□ 1.36
CRIM1-203ENST00000426856 FAM135BQ49AJ0 1406 aa23.54■■□□□ 1.36
CRIM1-203ENST00000426856 TMEM131LA2VDJ0 1609 aa23.54■■□□□ 1.36
CRIM1-203ENST00000426856 NKTRP30414 1462 aaKnown RBP23.54■■□□□ 1.36
CRIM1-203ENST00000426856 PROSER2Q86WR7 435 aaPredicted RBP23.52■■□□□ 1.36
CRIM1-203ENST00000426856 ROBO1Q9Y6N7 1651 aa23.51■■□□□ 1.35
CRIM1-203ENST00000426856 E9PCH4 1651 aa23.51■■□□□ 1.35
CRIM1-203ENST00000426856 RIMS2Q9UQ26 1411 aa23.5■■□□□ 1.35
CRIM1-203ENST00000426856 BCANQ96GW7 911 aa23.5■■□□□ 1.35
CRIM1-203ENST00000426856 PLEKHG1Q9ULL1 1385 aa23.5■■□□□ 1.35
CRIM1-203ENST00000426856 IQGAP3Q86VI3 1631 aa23.48■■□□□ 1.35
CRIM1-203ENST00000426856 CHD2O14647 1828 aaKnown RBP23.47■■□□□ 1.35
CRIM1-203ENST00000426856 ROCK1Q13464 1354 aa23.47■■□□□ 1.35
CRIM1-203ENST00000426856 PPP1R15AO75807 674 aaPredicted RBP23.45■■□□□ 1.34
CRIM1-203ENST00000426856 RGS17Q9UGC6 210 aaPredicted RBP23.45■■□□□ 1.34
CRIM1-203ENST00000426856 MSH6P52701 1360 aa23.42■■□□□ 1.34
CRIM1-203ENST00000426856 CHGAP10645 457 aaKnown RBP23.41■■□□□ 1.34
CRIM1-203ENST00000426856 NUTM2DQ5VT03 806 aaPredicted RBP23.4■■□□□ 1.34
CRIM1-203ENST00000426856 ADAMTS13Q76LX8 1427 aa23.4■■□□□ 1.34
CRIM1-203ENST00000426856 HDGFP51858 240 aaKnown RBP23.39■■□□□ 1.33
CRIM1-203ENST00000426856 ITGAEP38570 1179 aa23.38■■□□□ 1.33
CRIM1-203ENST00000426856 TBX22Q9Y458 520 aa23.38■■□□□ 1.33
CRIM1-203ENST00000426856 NUP155O75694 1391 aa23.38■■□□□ 1.33
CRIM1-203ENST00000426856 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.37■■□□□ 1.33
CRIM1-203ENST00000426856 SLAIN2Q9P270 581 aa23.37■■□□□ 1.33
CRIM1-203ENST00000426856 PHLPP1O60346 1717 aa23.36■■□□□ 1.33
CRIM1-203ENST00000426856 DIP2AQ14689 1571 aa23.36■■□□□ 1.33
CRIM1-203ENST00000426856 PPARGC1BQ86YN6 1023 aaKnown RBP23.35■■□□□ 1.33
CRIM1-203ENST00000426856 NCOA3Q9Y6Q9 1424 aa23.32■■□□□ 1.32
CRIM1-203ENST00000426856 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.3■■□□□ 1.32
CRIM1-203ENST00000426856 COL16A1Q07092 1604 aaPredicted RBP23.3■■□□□ 1.32
CRIM1-203ENST00000426856 PIK3R4Q99570 1358 aa23.3■■□□□ 1.32
CRIM1-203ENST00000426856 POTEAQ6S8J7 498 aa23.3■■□□□ 1.32
CRIM1-203ENST00000426856 SPHKAPQ2M3C7 1700 aa23.3■■□□□ 1.32
CRIM1-203ENST00000426856 TRPM2O94759 1503 aa23.29■■□□□ 1.32
CRIM1-203ENST00000426856 PTPRUQ92729 1446 aa23.28■■□□□ 1.32
CRIM1-203ENST00000426856 C14orf37Q86TY3 774 aa23.28■■□□□ 1.32
CRIM1-203ENST00000426856 NRXN3Q9Y4C0 1643 aa23.28■■□□□ 1.32
CRIM1-203ENST00000426856 JCADQ9P266 1359 aa23.27■■□□□ 1.32
CRIM1-203ENST00000426856 SETBP1Q9Y6X0 1596 aa23.24■■□□□ 1.31
CRIM1-203ENST00000426856 C19orf44Q9H6X5 657 aa23.24■■□□□ 1.31
CRIM1-203ENST00000426856 XRN1Q8IZH2 1706 aaKnown RBP23.24■■□□□ 1.31
CRIM1-203ENST00000426856 AMOTL2Q9Y2J4 779 aa23.23■■□□□ 1.31
CRIM1-203ENST00000426856 AHDC1Q5TGY3 1603 aaPredicted RBP23.22■■□□□ 1.31
CRIM1-203ENST00000426856 CADPS2Q86UW7 1296 aa23.22■■□□□ 1.31
CRIM1-203ENST00000426856 ATF3P18847 181 aa23.21■■□□□ 1.31
CRIM1-203ENST00000426856 CLTCL1P53675 1640 aa23.21■■□□□ 1.31
CRIM1-203ENST00000426856 LRP6O75581 1613 aa23.2■■□□□ 1.3
CRIM1-203ENST00000426856 RRBP1Q9P2E9 1410 aaKnown RBP23.17■■□□□ 1.3
CRIM1-203ENST00000426856 SETD1AO15047 1707 aaKnown RBP23.17■■□□□ 1.3
CRIM1-203ENST00000426856 ZNF326Q5BKZ1 582 aaKnown RBP23.17■■□□□ 1.3
CRIM1-203ENST00000426856 NEXMIFQ5QGS0 1516 aa23.17■■□□□ 1.3
CRIM1-203ENST00000426856 METP08581 1390 aa23.16■■□□□ 1.3
CRIM1-203ENST00000426856 SHPRHQ149N8 1683 aa23.16■■□□□ 1.3
CRIM1-203ENST00000426856 DCCP43146 1447 aa23.16■■□□□ 1.3
CRIM1-203ENST00000426856 NAIPQ13075 1403 aa23.16■■□□□ 1.3
CRIM1-203ENST00000426856 BRINP3Q76B58 766 aa23.15■■□□□ 1.3
CRIM1-203ENST00000426856 SPATA31A6Q5VVP1 1343 aa23.13■■□□□ 1.29
CRIM1-203ENST00000426856 ASXL1Q8IXJ9 1541 aa23.13■■□□□ 1.29
CRIM1-203ENST00000426856 MST1RQ04912 1400 aa23.11■■□□□ 1.29
CRIM1-203ENST00000426856 KIF1BO60333 1816 aa23.11■■□□□ 1.29
CRIM1-203ENST00000426856 NALCNQ8IZF0 1738 aa23.09■■□□□ 1.29
CRIM1-203ENST00000426856 NHSL1Q5SYE7 1610 aa23.08■■□□□ 1.29
CRIM1-203ENST00000426856 MEX3CQ5U5Q3 659 aaKnown RBP23.08■■□□□ 1.29
CRIM1-203ENST00000426856 ADGRL3Q9HAR2 1447 aa23.08■■□□□ 1.28
CRIM1-203ENST00000426856 HFM1A2PYH4 1435 aa23.04■■□□□ 1.28
CRIM1-203ENST00000426856 SETD5Q9C0A6 1442 aa23.04■■□□□ 1.28
CRIM1-203ENST00000426856 ZNF772Q68DY9 489 aaPredicted RBP23.02■■□□□ 1.28
CRIM1-203ENST00000426856 NUTM2BA6NNL0 878 aaPredicted RBP23.01■■□□□ 1.27
CRIM1-203ENST00000426856 NUTM2EB1AL46 878 aaPredicted RBP23.01■■□□□ 1.27
CRIM1-203ENST00000426856 NUTM2AQ8IVF1 878 aaPredicted RBP23.01■■□□□ 1.27
CRIM1-203ENST00000426856 DDX17Q92841 729 aaKnown RBP23.01■■□□□ 1.27
CRIM1-203ENST00000426856 TRIM52Q96A61 297 aa23.01■■□□□ 1.27
CRIM1-203ENST00000426856 PTCH1Q13635 1447 aa22.99■■□□□ 1.27
CRIM1-203ENST00000426856 ROBO2Q9HCK4 1378 aa22.98■■□□□ 1.27
CRIM1-203ENST00000426856 PPLO60437 1756 aa22.97■■□□□ 1.27
CRIM1-203ENST00000426856 VGFO15240 615 aaPredicted RBP22.96■■□□□ 1.27
CRIM1-203ENST00000426856 SLC4A1APQ9BWU0 796 aaKnown RBP22.96■■□□□ 1.27
CRIM1-203ENST00000426856 C1orf167Q5SNV9 1468 aa22.96■■□□□ 1.27
CRIM1-203ENST00000426856 PNPLA6Q8IY17 1366 aa22.95■■□□□ 1.26
CRIM1-203ENST00000426856 LRRC59Q96AG4 307 aaKnown RBP22.95■■□□□ 1.26
CRIM1-203ENST00000426856 PRAG1Q86YV5 1406 aa22.94■■□□□ 1.26
CRIM1-203ENST00000426856 LAMC1P11047 1609 aa22.93■■□□□ 1.26
CRIM1-203ENST00000426856 AFF2P51816 1311 aa22.93■■□□□ 1.26
CRIM1-203ENST00000426856 RPGRIP1LQ68CZ1 1315 aa22.92■■□□□ 1.26
CRIM1-203ENST00000426856 RXRBP28702 533 aa22.91■■□□□ 1.26
CRIM1-203ENST00000426856 FOXD1Q16676 465 aa22.91■■□□□ 1.26
CRIM1-203ENST00000426856 UPF1Q92900 1129 aaKnown RBP eCLIP22.89■■□□□ 1.25
CRIM1-203ENST00000426856 ORAI2Q96SN7 254 aa22.89■■□□□ 1.25
CRIM1-203ENST00000426856 CDK12Q9NYV4 1490 aaPredicted RBP22.88■■□□□ 1.25
CRIM1-203ENST00000426856 C8orf37Q96NL8 207 aa22.88■■□□□ 1.25
CRIM1-203ENST00000426856 SOS2Q07890 1332 aaPredicted RBP22.85■■□□□ 1.25
CRIM1-203ENST00000426856 ADGRF5Q8IZF2 1346 aa22.83■■□□□ 1.25
CRIM1-203ENST00000426856 IFT172Q9UG01 1749 aa22.83■■□□□ 1.25
CRIM1-203ENST00000426856 CDC42BPGQ6DT37 1551 aa22.83■■□□□ 1.25
CRIM1-203ENST00000426856 CCDC144AA2RUR9 1427 aa22.82■■□□□ 1.24
CRIM1-203ENST00000426856 RGS12O14924 1447 aa22.82■■□□□ 1.24
CRIM1-203ENST00000426856 SPATA31E1Q6ZUB1 1445 aa22.82■■□□□ 1.24
CRIM1-203ENST00000426856 ADAMTS2O95450 1211 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms