RNA–Protein interactions for RNA: ENST00000426722.5

NELFE-203, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-203ENST00000426722 NWD1Q149M9 1564 aa19.83■□□□□ 0.77
NELFE-203ENST00000426722 PROSER2Q86WR7 435 aaPredicted RBP19.83■□□□□ 0.77
NELFE-203ENST00000426722 NKTRP30414 1462 aaKnown RBP19.83■□□□□ 0.76
NELFE-203ENST00000426722 MYO5BQ9ULV0 1848 aa19.83■□□□□ 0.76
NELFE-203ENST00000426722 BCANQ96GW7 911 aa19.81■□□□□ 0.76
NELFE-203ENST00000426722 ZFYVE9O95405 1425 aa19.81■□□□□ 0.76
NELFE-203ENST00000426722 PLEKHG1Q9ULL1 1385 aa19.81■□□□□ 0.76
NELFE-203ENST00000426722 TMEM131LA2VDJ0 1609 aa19.8■□□□□ 0.76
NELFE-203ENST00000426722 CHD2O14647 1828 aaKnown RBP19.79■□□□□ 0.76
NELFE-203ENST00000426722 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.79■□□□□ 0.76
NELFE-203ENST00000426722 RIMS2Q9UQ26 1411 aa19.78■□□□□ 0.76
NELFE-203ENST00000426722 IQGAP3Q86VI3 1631 aa19.78■□□□□ 0.76
NELFE-203ENST00000426722 SENP3Q9H4L4 574 aaPredicted RBP19.78■□□□□ 0.76
NELFE-203ENST00000426722 E9PCH4 1651 aa19.78■□□□□ 0.76
NELFE-203ENST00000426722 PPP1R15AO75807 674 aaPredicted RBP19.77■□□□□ 0.76
NELFE-203ENST00000426722 TBX22Q9Y458 520 aa19.76■□□□□ 0.75
NELFE-203ENST00000426722 MSH6P52701 1360 aa19.75■□□□□ 0.75
NELFE-203ENST00000426722 ROBO1Q9Y6N7 1651 aa19.75■□□□□ 0.75
NELFE-203ENST00000426722 NCOA3Q9Y6Q9 1424 aa19.74■□□□□ 0.75
NELFE-203ENST00000426722 CHGAP10645 457 aaKnown RBP19.72■□□□□ 0.75
NELFE-203ENST00000426722 NUP155O75694 1391 aa19.71■□□□□ 0.75
NELFE-203ENST00000426722 DIP2AQ14689 1571 aa19.71■□□□□ 0.75
NELFE-203ENST00000426722 PIK3R4Q99570 1358 aa19.7■□□□□ 0.74
NELFE-203ENST00000426722 RBM33Q96EV2 1170 aaKnown RBP19.7■□□□□ 0.74
NELFE-203ENST00000426722 SLAIN2Q9P270 581 aa19.69■□□□□ 0.74
NELFE-203ENST00000426722 ADAMTS13Q76LX8 1427 aa19.68■□□□□ 0.74
NELFE-203ENST00000426722 ITGAEP38570 1179 aa19.66■□□□□ 0.74
NELFE-203ENST00000426722 RGS17Q9UGC6 210 aaPredicted RBP19.65■□□□□ 0.74
NELFE-203ENST00000426722 PHLPP1O60346 1717 aa19.65■□□□□ 0.74
NELFE-203ENST00000426722 TRPM2O94759 1503 aa19.64■□□□□ 0.73
NELFE-203ENST00000426722 SPHKAPQ2M3C7 1700 aa19.64■□□□□ 0.73
NELFE-203ENST00000426722 NUTM2DQ5VT03 806 aaPredicted RBP19.62■□□□□ 0.73
NELFE-203ENST00000426722 CADPS2Q86UW7 1296 aa19.62■□□□□ 0.73
NELFE-203ENST00000426722 C19orf44Q9H6X5 657 aa19.62■□□□□ 0.73
NELFE-203ENST00000426722 JCADQ9P266 1359 aa19.61■□□□□ 0.73
NELFE-203ENST00000426722 C14orf37Q86TY3 774 aa19.61■□□□□ 0.73
NELFE-203ENST00000426722 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.6■□□□□ 0.73
NELFE-203ENST00000426722 AMOTL2Q9Y2J4 779 aa19.59■□□□□ 0.73
NELFE-203ENST00000426722 ATF3P18847 181 aa19.58■□□□□ 0.72
NELFE-203ENST00000426722 PPARGC1BQ86YN6 1023 aaKnown RBP19.57■□□□□ 0.72
NELFE-203ENST00000426722 RRBP1Q9P2E9 1410 aaKnown RBP19.57■□□□□ 0.72
NELFE-203ENST00000426722 SETBP1Q9Y6X0 1596 aa19.57■□□□□ 0.72
NELFE-203ENST00000426722 COL16A1Q07092 1604 aaPredicted RBP19.56■□□□□ 0.72
NELFE-203ENST00000426722 PTPRUQ92729 1446 aa19.55■□□□□ 0.72
NELFE-203ENST00000426722 AHDC1Q5TGY3 1603 aaPredicted RBP19.54■□□□□ 0.72
NELFE-203ENST00000426722 NRXN3Q9Y4C0 1643 aa19.54■□□□□ 0.72
NELFE-203ENST00000426722 DCCP43146 1447 aa19.54■□□□□ 0.72
NELFE-203ENST00000426722 ZNF326Q5BKZ1 582 aaKnown RBP19.54■□□□□ 0.72
NELFE-203ENST00000426722 POTEAQ6S8J7 498 aa19.54■□□□□ 0.72
NELFE-203ENST00000426722 SPATA31A6Q5VVP1 1343 aa19.53■□□□□ 0.72
NELFE-203ENST00000426722 KIF1BO60333 1816 aa19.53■□□□□ 0.72
NELFE-203ENST00000426722 XRN1Q8IZH2 1706 aaKnown RBP19.53■□□□□ 0.72
NELFE-203ENST00000426722 NAIPQ13075 1403 aa19.51■□□□□ 0.71
NELFE-203ENST00000426722 CLTCL1P53675 1640 aa19.5■□□□□ 0.71
NELFE-203ENST00000426722 SHPRHQ149N8 1683 aa19.49■□□□□ 0.71
NELFE-203ENST00000426722 NEXMIFQ5QGS0 1516 aa19.49■□□□□ 0.71
NELFE-203ENST00000426722 BRINP3Q76B58 766 aa19.47■□□□□ 0.71
NELFE-203ENST00000426722 METP08581 1390 aa19.45■□□□□ 0.7
NELFE-203ENST00000426722 VGFO15240 615 aaPredicted RBP19.44■□□□□ 0.7
NELFE-203ENST00000426722 ZNF772Q68DY9 489 aaPredicted RBP19.44■□□□□ 0.7
NELFE-203ENST00000426722 HFM1A2PYH4 1435 aa19.43■□□□□ 0.7
NELFE-203ENST00000426722 MST1RQ04912 1400 aa19.43■□□□□ 0.7
NELFE-203ENST00000426722 MEX3CQ5U5Q3 659 aaKnown RBP19.43■□□□□ 0.7
NELFE-203ENST00000426722 TRIM52Q96A61 297 aa19.43■□□□□ 0.7
NELFE-203ENST00000426722 RPGRIP1LQ68CZ1 1315 aa19.43■□□□□ 0.7
NELFE-203ENST00000426722 LRP6O75581 1613 aa19.43■□□□□ 0.7
NELFE-203ENST00000426722 ADGRL3Q9HAR2 1447 aa19.42■□□□□ 0.7
NELFE-203ENST00000426722 ASXL1Q8IXJ9 1541 aa19.42■□□□□ 0.7
NELFE-203ENST00000426722 NHSL1Q5SYE7 1610 aa19.42■□□□□ 0.7
NELFE-203ENST00000426722 SETD5Q9C0A6 1442 aa19.42■□□□□ 0.7
NELFE-203ENST00000426722 LRRC59Q96AG4 307 aaKnown RBP19.4■□□□□ 0.7
NELFE-203ENST00000426722 SLC4A1APQ9BWU0 796 aaKnown RBP19.39■□□□□ 0.69
NELFE-203ENST00000426722 NALCNQ8IZF0 1738 aa19.38■□□□□ 0.69
NELFE-203ENST00000426722 SETD1AO15047 1707 aaKnown RBP19.37■□□□□ 0.69
NELFE-203ENST00000426722 PTCH1Q13635 1447 aa19.37■□□□□ 0.69
NELFE-203ENST00000426722 PRAG1Q86YV5 1406 aa19.36■□□□□ 0.69
NELFE-203ENST00000426722 PPLO60437 1756 aa19.36■□□□□ 0.69
NELFE-203ENST00000426722 NUTM2BA6NNL0 878 aaPredicted RBP19.33■□□□□ 0.68
NELFE-203ENST00000426722 NUTM2EB1AL46 878 aaPredicted RBP19.33■□□□□ 0.68
NELFE-203ENST00000426722 NUTM2AQ8IVF1 878 aaPredicted RBP19.33■□□□□ 0.68
NELFE-203ENST00000426722 C1orf167Q5SNV9 1468 aa19.32■□□□□ 0.68
NELFE-203ENST00000426722 LAMC1P11047 1609 aa19.32■□□□□ 0.68
NELFE-203ENST00000426722 RXRBP28702 533 aa19.31■□□□□ 0.68
NELFE-203ENST00000426722 CDK12Q9NYV4 1490 aaPredicted RBP19.3■□□□□ 0.68
NELFE-203ENST00000426722 ROBO2Q9HCK4 1378 aa19.3■□□□□ 0.68
NELFE-203ENST00000426722 ACIN1Q9UKV3 1341 aaKnown RBP19.29■□□□□ 0.68
NELFE-203ENST00000426722 PNPLA6Q8IY17 1366 aa19.29■□□□□ 0.68
NELFE-203ENST00000426722 AFF2P51816 1311 aa19.27■□□□□ 0.68
NELFE-203ENST00000426722 CCDC144AA2RUR9 1427 aa19.27■□□□□ 0.68
NELFE-203ENST00000426722 SOS2Q07890 1332 aaPredicted RBP19.26■□□□□ 0.67
NELFE-203ENST00000426722 DDX17Q92841 729 aaKnown RBP19.26■□□□□ 0.67
NELFE-203ENST00000426722 ANKRD30BQ9BXX2 1392 aa19.24■□□□□ 0.67
NELFE-203ENST00000426722 UPF1Q92900 1129 aaKnown RBP eCLIP19.24■□□□□ 0.67
NELFE-203ENST00000426722 ORAI2Q96SN7 254 aa19.24■□□□□ 0.67
NELFE-203ENST00000426722 IFT172Q9UG01 1749 aa19.23■□□□□ 0.67
NELFE-203ENST00000426722 C8orf37Q96NL8 207 aa19.23■□□□□ 0.67
NELFE-203ENST00000426722 MPHOSPH9Q99550 1183 aa19.23■□□□□ 0.67
NELFE-203ENST00000426722 FOXD1Q16676 465 aa19.22■□□□□ 0.67
NELFE-203ENST00000426722 SPATA31E1Q6ZUB1 1445 aa19.22■□□□□ 0.67
NELFE-203ENST00000426722 CDC42BPGQ6DT37 1551 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms