RNA–Protein interactions for RNA: ENST00000426511.5

SEMA3F-205, Transcript of semaphorin 3F, humanhuman

TSL 5

Gene SEMA3F, Length 757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-205ENST00000426511 RIMS2Q9UQ26 1411 aa33.23■■■□□ 2.91
SEMA3F-205ENST00000426511 TOM1O60784 492 aa33.22■■■□□ 2.91
SEMA3F-205ENST00000426511 LRRC7Q96NW7 1537 aa33.22■■■□□ 2.91
SEMA3F-205ENST00000426511 HFM1A2PYH4 1435 aa33.21■■■□□ 2.91
SEMA3F-205ENST00000426511 HDGFP51858 240 aaKnown RBP33.19■■■□□ 2.9
SEMA3F-205ENST00000426511 ZFYVE9O95405 1425 aa33.19■■■□□ 2.9
SEMA3F-205ENST00000426511 NUTM2DQ5VT03 806 aaPredicted RBP33.18■■■□□ 2.9
SEMA3F-205ENST00000426511 SPHKAPQ2M3C7 1700 aa33.17■■■□□ 2.9
SEMA3F-205ENST00000426511 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.13■■■□□ 2.89
SEMA3F-205ENST00000426511 PLEKHG1Q9ULL1 1385 aa33.12■■■□□ 2.89
SEMA3F-205ENST00000426511 KCNA6P17658 529 aa33.09■■■□□ 2.89
SEMA3F-205ENST00000426511 ZNF326Q5BKZ1 582 aaKnown RBP33.08■■■□□ 2.89
SEMA3F-205ENST00000426511 SLC4A1APQ9BWU0 796 aaKnown RBP33.07■■■□□ 2.88
SEMA3F-205ENST00000426511 PROSER2Q86WR7 435 aaPredicted RBP33.04■■■□□ 2.88
SEMA3F-205ENST00000426511 RBM33Q96EV2 1170 aaKnown RBP33.04■■■□□ 2.88
SEMA3F-205ENST00000426511 ALKQ9UM73 1620 aa33.02■■■□□ 2.88
SEMA3F-205ENST00000426511 TMEM94Q12767 1356 aa33.02■■■□□ 2.88
SEMA3F-205ENST00000426511 CLTCL1P53675 1640 aa33.02■■■□□ 2.88
SEMA3F-205ENST00000426511 TRPM2O94759 1503 aa33.02■■■□□ 2.88
SEMA3F-205ENST00000426511 XIRP1Q702N8 1843 aaKnown RBP33.01■■■□□ 2.87
SEMA3F-205ENST00000426511 HSPA1LP34931 641 aa33.01■■■□□ 2.87
SEMA3F-205ENST00000426511 DISP3Q9P2K9 1392 aa32.98■■■□□ 2.87
SEMA3F-205ENST00000426511 NWD1Q149M9 1564 aa32.98■■■□□ 2.87
SEMA3F-205ENST00000426511 TBX22Q9Y458 520 aa32.97■■■□□ 2.87
SEMA3F-205ENST00000426511 NKTRP30414 1462 aaKnown RBP32.96■■■□□ 2.87
SEMA3F-205ENST00000426511 ADAMTS13Q76LX8 1427 aa32.94■■■□□ 2.86
SEMA3F-205ENST00000426511 FOXD1Q16676 465 aa32.94■■■□□ 2.86
SEMA3F-205ENST00000426511 CHD2O14647 1828 aaKnown RBP32.92■■■□□ 2.86
SEMA3F-205ENST00000426511 KIF1BO60333 1816 aa32.92■■■□□ 2.86
SEMA3F-205ENST00000426511 DIP2AQ14689 1571 aa32.91■■■□□ 2.86
SEMA3F-205ENST00000426511 MSH6P52701 1360 aa32.85■■■□□ 2.85
SEMA3F-205ENST00000426511 C14orf37Q86TY3 774 aa32.85■■■□□ 2.85
SEMA3F-205ENST00000426511 NEXMIFQ5QGS0 1516 aa32.85■■■□□ 2.85
SEMA3F-205ENST00000426511 MPHOSPH9Q99550 1183 aa32.84■■■□□ 2.85
SEMA3F-205ENST00000426511 SETD5Q9C0A6 1442 aa32.84■■■□□ 2.85
SEMA3F-205ENST00000426511 PIK3R4Q99570 1358 aa32.82■■■□□ 2.84
SEMA3F-205ENST00000426511 NRXN3Q9Y4C0 1643 aa32.81■■■□□ 2.84
SEMA3F-205ENST00000426511 AMOTL2Q9Y2J4 779 aa32.81■■■□□ 2.84
SEMA3F-205ENST00000426511 SETBP1Q9Y6X0 1596 aa32.81■■■□□ 2.84
SEMA3F-205ENST00000426511 PTPRUQ92729 1446 aa32.77■■■□□ 2.84
SEMA3F-205ENST00000426511 CCDC144AA2RUR9 1427 aa32.76■■■□□ 2.83
SEMA3F-205ENST00000426511 RAB3GAP2Q9H2M9 1393 aa32.74■■■□□ 2.83
SEMA3F-205ENST00000426511 METP08581 1390 aa32.73■■■□□ 2.83
SEMA3F-205ENST00000426511 VGFO15240 615 aaPredicted RBP32.73■■■□□ 2.83
SEMA3F-205ENST00000426511 FAM135BQ49AJ0 1406 aa32.71■■■□□ 2.83
SEMA3F-205ENST00000426511 ROBO1Q9Y6N7 1651 aa32.7■■■□□ 2.83
SEMA3F-205ENST00000426511 RGL3Q3MIN7 710 aa32.7■■■□□ 2.83
SEMA3F-205ENST00000426511 RPGRIP1LQ68CZ1 1315 aa32.7■■■□□ 2.82
SEMA3F-205ENST00000426511 ACIN1Q9UKV3 1341 aaKnown RBP32.7■■■□□ 2.82
SEMA3F-205ENST00000426511 SLAIN2Q9P270 581 aa32.69■■■□□ 2.82
SEMA3F-205ENST00000426511 NCOA3Q9Y6Q9 1424 aa32.68■■■□□ 2.82
SEMA3F-205ENST00000426511 MED1Q15648 1581 aaPredicted RBP32.67■■■□□ 2.82
SEMA3F-205ENST00000426511 XRN1Q8IZH2 1706 aaKnown RBP32.66■■■□□ 2.82
SEMA3F-205ENST00000426511 ILDR2Q71H61 639 aa32.66■■■□□ 2.82
SEMA3F-205ENST00000426511 PPLO60437 1756 aa32.65■■■□□ 2.82
SEMA3F-205ENST00000426511 ATF3P18847 181 aa32.65■■■□□ 2.82
SEMA3F-205ENST00000426511 C19orf44Q9H6X5 657 aa32.65■■■□□ 2.82
SEMA3F-205ENST00000426511 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.63■■■□□ 2.81
SEMA3F-205ENST00000426511 CADPS2Q86UW7 1296 aa32.61■■■□□ 2.81
SEMA3F-205ENST00000426511 SPATA31E1Q6ZUB1 1445 aa32.58■■■□□ 2.81
SEMA3F-205ENST00000426511 PHF23Q9BUL5 403 aaPredicted RBP32.56■■■□□ 2.8
SEMA3F-205ENST00000426511 ADGRF5Q8IZF2 1346 aa32.55■■■□□ 2.8
SEMA3F-205ENST00000426511 SETD1AO15047 1707 aaKnown RBP32.54■■■□□ 2.8
SEMA3F-205ENST00000426511 PHLPP1O60346 1717 aa32.52■■■□□ 2.8
SEMA3F-205ENST00000426511 ANKRD30BQ9BXX2 1392 aa32.51■■■□□ 2.79
SEMA3F-205ENST00000426511 IFT172Q9UG01 1749 aa32.48■■■□□ 2.79
SEMA3F-205ENST00000426511 DCCP43146 1447 aa32.48■■■□□ 2.79
SEMA3F-205ENST00000426511 ADGRL3Q9HAR2 1447 aa32.47■■■□□ 2.79
SEMA3F-205ENST00000426511 ROBO2Q9HCK4 1378 aa32.46■■■□□ 2.79
SEMA3F-205ENST00000426511 NALCNQ8IZF0 1738 aa32.46■■■□□ 2.79
SEMA3F-205ENST00000426511 PTCH1Q13635 1447 aa32.45■■■□□ 2.79
SEMA3F-205ENST00000426511 STK26Q9P289 416 aa32.43■■■□□ 2.78
SEMA3F-205ENST00000426511 BRINP3Q76B58 766 aa32.42■■■□□ 2.78
SEMA3F-205ENST00000426511 MST1RQ04912 1400 aa32.41■■■□□ 2.78
SEMA3F-205ENST00000426511 HRCP23327 699 aa32.39■■■□□ 2.78
SEMA3F-205ENST00000426511 TMEM132EQ6IEE7 984 aa32.39■■■□□ 2.78
SEMA3F-205ENST00000426511 COL16A1Q07092 1604 aaPredicted RBP32.38■■■□□ 2.77
SEMA3F-205ENST00000426511 PIK3C2GO75747 1445 aa32.38■■■□□ 2.77
SEMA3F-205ENST00000426511 JCADQ9P266 1359 aa32.37■■■□□ 2.77
SEMA3F-205ENST00000426511 AHDC1Q5TGY3 1603 aaPredicted RBP32.36■■■□□ 2.77
SEMA3F-205ENST00000426511 ASXL1Q8IXJ9 1541 aa32.36■■■□□ 2.77
SEMA3F-205ENST00000426511 PRAG1Q86YV5 1406 aa32.34■■■□□ 2.77
SEMA3F-205ENST00000426511 SOCS7O14512 581 aa32.33■■■□□ 2.77
SEMA3F-205ENST00000426511 LRPPRCP42704 1394 aaKnown RBP32.31■■■□□ 2.76
SEMA3F-205ENST00000426511 MYOM2P54296 1465 aa32.3■■■□□ 2.76
SEMA3F-205ENST00000426511 CFAP70Q5T0N1 1121 aa32.29■■■□□ 2.76
SEMA3F-205ENST00000426511 WAPLQ7Z5K2 1190 aa32.29■■■□□ 2.76
SEMA3F-205ENST00000426511 DDX17Q92841 729 aaKnown RBP32.28■■■□□ 2.76
SEMA3F-205ENST00000426511 KDM2AQ9Y2K7 1162 aa32.28■■■□□ 2.76
SEMA3F-205ENST00000426511 C1orf167Q5SNV9 1468 aa32.28■■■□□ 2.76
SEMA3F-205ENST00000426511 YTHDC2Q9H6S0 1430 aaKnown RBP32.26■■■□□ 2.76
SEMA3F-205ENST00000426511 C14orf93Q9H972 538 aaKnown RBP32.26■■■□□ 2.75
SEMA3F-205ENST00000426511 NRXN1Q9ULB1 1477 aa32.26■■■□□ 2.75
SEMA3F-205ENST00000426511 TECPR2O15040 1411 aa32.25■■■□□ 2.75
SEMA3F-205ENST00000426511 ABCC11Q96J66 1382 aa32.24■■■□□ 2.75
SEMA3F-205ENST00000426511 DCAF11Q8TEB1 546 aa32.24■■■□□ 2.75
SEMA3F-205ENST00000426511 NHSL1Q5SYE7 1610 aa32.23■■■□□ 2.75
SEMA3F-205ENST00000426511 ORAI2Q96SN7 254 aa32.23■■■□□ 2.75
SEMA3F-205ENST00000426511 RGS17Q9UGC6 210 aaPredicted RBP32.23■■■□□ 2.75
SEMA3F-205ENST00000426511 KNDC1Q76NI1 1749 aa32.23■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms