RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 COL17A1Q9UMD9 1497 aaPredicted RBP17.96■□□□□ 0.47
USP42-203ENST00000426246 REREQ9P2R6 1566 aa17.96■□□□□ 0.47
USP42-203ENST00000426246 CCDC7Q96M83 1385 aa17.96■□□□□ 0.47
USP42-203ENST00000426246 LAMC1P11047 1609 aa17.96■□□□□ 0.47
USP42-203ENST00000426246 MADDQ8WXG6 1647 aa17.95■□□□□ 0.46
USP42-203ENST00000426246 ZC3H13Q5T200 1668 aaKnown RBP17.95■□□□□ 0.46
USP42-203ENST00000426246 ANP32AP39687 249 aaKnown RBP17.95■□□□□ 0.46
USP42-203ENST00000426246 RTL5Q5HYW3 569 aaPredicted RBP17.95■□□□□ 0.46
USP42-203ENST00000426246 NPATQ14207 1427 aa17.95■□□□□ 0.46
USP42-203ENST00000426246 MROH2AA6NES4 1674 aa17.95■□□□□ 0.46
USP42-203ENST00000426246 IFT172Q9UG01 1749 aa17.95■□□□□ 0.46
USP42-203ENST00000426246 USP47Q96K76 1375 aa17.93■□□□□ 0.46
USP42-203ENST00000426246 PAK3O75914 559 aaPredicted RBP17.93■□□□□ 0.46
USP42-203ENST00000426246 RTN4Q9NQC3 1192 aaKnown RBP17.93■□□□□ 0.46
USP42-203ENST00000426246 KIF1BO60333 1816 aa17.92■□□□□ 0.46
USP42-203ENST00000426246 GPRASP1Q5JY77 1395 aa17.92■□□□□ 0.46
USP42-203ENST00000426246 PIK3C2BO00750 1634 aa17.9■□□□□ 0.46
USP42-203ENST00000426246 ZBTB47Q9UFB7 747 aaPredicted RBP17.89■□□□□ 0.45
USP42-203ENST00000426246 ADGRB3O60242 1522 aa17.89■□□□□ 0.45
USP42-203ENST00000426246 CFAP65Q6ZU64 1925 aaKnown RBP17.88■□□□□ 0.45
USP42-203ENST00000426246 SYNMO15061 1565 aa17.88■□□□□ 0.45
USP42-203ENST00000426246 AGLP35573 1532 aa17.87■□□□□ 0.45
USP42-203ENST00000426246 NOS1P29475 1434 aa17.87■□□□□ 0.45
USP42-203ENST00000426246 GGT6Q6P531 493 aa17.87■□□□□ 0.45
USP42-203ENST00000426246 ARHGAP31Q2M1Z3 1444 aa17.87■□□□□ 0.45
USP42-203ENST00000426246 ARHGEF40Q8TER5 1519 aa17.86■□□□□ 0.45
USP42-203ENST00000426246 DEKP35659 375 aaKnown RBP17.86■□□□□ 0.45
USP42-203ENST00000426246 EXOC6Q8TAG9 804 aa17.86■□□□□ 0.45
USP42-203ENST00000426246 CDCA7LQ96GN5 454 aa17.86■□□□□ 0.45
USP42-203ENST00000426246 CNTLNQ9NXG0 1405 aa17.85■□□□□ 0.45
USP42-203ENST00000426246 CHGAP10645 457 aaKnown RBP17.85■□□□□ 0.45
USP42-203ENST00000426246 NOP58Q9Y2X3 529 aaKnown RBP17.85■□□□□ 0.45
USP42-203ENST00000426246 NBPF1Q3BBV0 1214 aa17.85■□□□□ 0.45
USP42-203ENST00000426246 ROCK2O75116 1388 aaKnown RBP17.84■□□□□ 0.45
USP42-203ENST00000426246 KIAA1210Q9ULL0 1709 aa17.84■□□□□ 0.45
USP42-203ENST00000426246 TNNT2P45379 298 aaPredicted RBP17.84■□□□□ 0.45
USP42-203ENST00000426246 IQGAP1P46940 1657 aa17.84■□□□□ 0.45
USP42-203ENST00000426246 MYOM2P54296 1465 aa17.83■□□□□ 0.45
USP42-203ENST00000426246 ZBED9Q6R2W3 1325 aa17.83■□□□□ 0.44
USP42-203ENST00000426246 NRXN1Q9ULB1 1477 aa17.83■□□□□ 0.44
USP42-203ENST00000426246 PPLO60437 1756 aa17.83■□□□□ 0.44
USP42-203ENST00000426246 WASHC2CQ9Y4E1 1318 aa17.82■□□□□ 0.44
USP42-203ENST00000426246 NUDCQ9Y266 331 aa17.82■□□□□ 0.44
USP42-203ENST00000426246 PREX1Q8TCU6 1659 aa17.82■□□□□ 0.44
USP42-203ENST00000426246 NEUROD2Q15784 382 aa17.82■□□□□ 0.44
USP42-203ENST00000426246 DAXXQ9UER7 740 aaPredicted RBP17.81■□□□□ 0.44
USP42-203ENST00000426246 SLC4A3P48751 1232 aa17.81■□□□□ 0.44
USP42-203ENST00000426246 RGS3P49796 1198 aa17.78■□□□□ 0.44
USP42-203ENST00000426246 STAC3Q96MF2 364 aa17.78■□□□□ 0.44
USP42-203ENST00000426246 ARXQ96QS3 562 aa17.78■□□□□ 0.44
USP42-203ENST00000426246 CLTCQ00610 1675 aaKnown RBP17.76■□□□□ 0.43
USP42-203ENST00000426246 ARID4BQ4LE39 1312 aaPredicted RBP17.76■□□□□ 0.43
USP42-203ENST00000426246 MYO5BQ9ULV0 1848 aa17.75■□□□□ 0.43
USP42-203ENST00000426246 CCDC146Q8IYE0 955 aa17.75■□□□□ 0.43
USP42-203ENST00000426246 RCAN3Q9UKA8 241 aa17.75■□□□□ 0.43
USP42-203ENST00000426246 TESK2Q96S53 571 aa17.73■□□□□ 0.43
USP42-203ENST00000426246 NEXMIFQ5QGS0 1516 aa17.73■□□□□ 0.43
USP42-203ENST00000426246 TMEM131LA2VDJ0 1609 aa17.73■□□□□ 0.43
USP42-203ENST00000426246 ADGRF5Q8IZF2 1346 aa17.72■□□□□ 0.43
USP42-203ENST00000426246 PANK3Q9H999 370 aa17.71■□□□□ 0.43
USP42-203ENST00000426246 PIK3C2GO75747 1445 aa17.71■□□□□ 0.43
USP42-203ENST00000426246 PNISRQ8TF01 805 aaKnown RBP17.71■□□□□ 0.42
USP42-203ENST00000426246 ERVK-7P63135 1459 aa17.7■□□□□ 0.42
USP42-203ENST00000426246 FANCIQ9NVI1 1328 aa17.7■□□□□ 0.42
USP42-203ENST00000426246 WDR43Q15061 677 aaKnown RBP eCLIP17.7■□□□□ 0.42
USP42-203ENST00000426246 SPATA31D1Q6ZQQ2 1576 aa17.69■□□□□ 0.42
USP42-203ENST00000426246 SETBP1Q9Y6X0 1596 aa17.69■□□□□ 0.42
USP42-203ENST00000426246 CANXP27824 592 aaKnown RBP17.69■□□□□ 0.42
USP42-203ENST00000426246 SCAF11Q99590 1463 aaKnown RBP17.69■□□□□ 0.42
USP42-203ENST00000426246 PPP6R1Q9UPN7 881 aa17.68■□□□□ 0.42
USP42-203ENST00000426246 ADGRB1O14514 1584 aa17.68■□□□□ 0.42
USP42-203ENST00000426246 NEFMP07197 916 aa17.68■□□□□ 0.42
USP42-203ENST00000426246 DISP3Q9P2K9 1392 aa17.67■□□□□ 0.42
USP42-203ENST00000426246 MYO3AQ8NEV4 1616 aa17.67■□□□□ 0.42
USP42-203ENST00000426246 IDI1Q13907 227 aa17.66■□□□□ 0.42
USP42-203ENST00000426246 NUTM2DQ5VT03 806 aaPredicted RBP17.65■□□□□ 0.42
USP42-203ENST00000426246 RPGRIP1LQ68CZ1 1315 aa17.64■□□□□ 0.41
USP42-203ENST00000426246 FBXO31Q5XUX0 539 aaPredicted RBP17.64■□□□□ 0.41
USP42-203ENST00000426246 CRBNQ96SW2 442 aa17.64■□□□□ 0.41
USP42-203ENST00000426246 CFAP70Q5T0N1 1121 aa17.64■□□□□ 0.41
USP42-203ENST00000426246 RRP1P56182 461 aaKnown RBP17.63■□□□□ 0.41
USP42-203ENST00000426246 KNSTRNQ9Y448 316 aa17.63■□□□□ 0.41
USP42-203ENST00000426246 SLC52A1Q9NWF4 448 aa17.63■□□□□ 0.41
USP42-203ENST00000426246 SAFB2Q14151 953 aaKnown RBP eCLIP17.62■□□□□ 0.41
USP42-203ENST00000426246 IPO9Q96P70 1041 aaKnown RBP17.62■□□□□ 0.41
USP42-203ENST00000426246 ZFYVE9O95405 1425 aa17.62■□□□□ 0.41
USP42-203ENST00000426246 MYOM1P52179 1685 aa17.61■□□□□ 0.41
USP42-203ENST00000426246 FRAT1Q92837 279 aaPredicted RBP17.61■□□□□ 0.41
USP42-203ENST00000426246 C20orf194Q5TEA3 1177 aa17.61■□□□□ 0.41
USP42-203ENST00000426246 MYBBP1AQ9BQG0 1328 aaKnown RBP17.59■□□□□ 0.41
USP42-203ENST00000426246 PDE4AP27815 886 aa17.59■□□□□ 0.41
USP42-203ENST00000426246 C14orf93Q9H972 538 aaKnown RBP17.59■□□□□ 0.41
USP42-203ENST00000426246 KTN1Q86UP2 1357 aaKnown RBP17.59■□□□□ 0.41
USP42-203ENST00000426246 NLRP13Q86W25 1043 aa17.58■□□□□ 0.41
USP42-203ENST00000426246 ASXL1Q8IXJ9 1541 aa17.58■□□□□ 0.4
USP42-203ENST00000426246 RRP7AQ9Y3A4 280 aaKnown RBP17.58■□□□□ 0.4
USP42-203ENST00000426246 ADAMTS8Q9UP79 889 aa17.58■□□□□ 0.4
USP42-203ENST00000426246 ARHGEF28Q8N1W1 1705 aaKnown RBP17.56■□□□□ 0.4
USP42-203ENST00000426246 A2ML1A8K2U0 1454 aa17.55■□□□□ 0.4
USP42-203ENST00000426246 BCL2L13Q9BXK5 485 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms