RNA–Protein interactions for RNA: ENST00000425654.6

CNKSR2-203, Transcript of connector enhancer of kinase suppressor of Ras 2, humanhuman

TSL 1 (best) BASIC

Gene CNKSR2, Length 5,668 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR2-203ENST00000425654 ARID3AQ99856 593 aa17.59■□□□□ 0.41
CNKSR2-203ENST00000425654 C9orf78Q9NZ63 289 aaPredicted RBP17.59■□□□□ 0.41
CNKSR2-203ENST00000425654 MARCH6O60337 910 aa17.59■□□□□ 0.41
CNKSR2-203ENST00000425654 RUNDC1Q96C34 613 aa17.59■□□□□ 0.41
CNKSR2-203ENST00000425654 EVA1CP58658 441 aa17.58■□□□□ 0.41
CNKSR2-203ENST00000425654 TPM3P06753 285 aa17.58■□□□□ 0.4
CNKSR2-203ENST00000425654 EIF2S2P20042 333 aaKnown RBP17.58■□□□□ 0.4
CNKSR2-203ENST00000425654 RSPH6AQ9H0K4 717 aa17.58■□□□□ 0.4
CNKSR2-203ENST00000425654 CCDC7Q96M83 1385 aa17.57■□□□□ 0.4
CNKSR2-203ENST00000425654 SLC4A3P48751 1232 aa17.57■□□□□ 0.4
CNKSR2-203ENST00000425654 GSE1Q14687 1217 aa17.57■□□□□ 0.4
CNKSR2-203ENST00000425654 AKAP17AQ02040 695 aaKnown RBP17.57■□□□□ 0.4
CNKSR2-203ENST00000425654 GOLGA6L1Q8N7Z2 621 aa17.57■□□□□ 0.4
CNKSR2-203ENST00000425654 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.57■□□□□ 0.4
CNKSR2-203ENST00000425654 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.56■□□□□ 0.4
CNKSR2-203ENST00000425654 SYNE3Q6ZMZ3 975 aa17.56■□□□□ 0.4
CNKSR2-203ENST00000425654 ZKSCAN1P17029 563 aaPredicted RBP17.55■□□□□ 0.4
CNKSR2-203ENST00000425654 GOLGA6L19H0YKK7 550 aa17.55■□□□□ 0.4
CNKSR2-203ENST00000425654 DDX58O95786 925 aaKnown RBP17.55■□□□□ 0.4
CNKSR2-203ENST00000425654 KIF7Q2M1P5 1343 aa17.55■□□□□ 0.4
CNKSR2-203ENST00000425654 MIA2Q96PC5 1412 aa17.54■□□□□ 0.4
CNKSR2-203ENST00000425654 IFIT2P09913 472 aaKnown RBP17.54■□□□□ 0.4
CNKSR2-203ENST00000425654 TPD52L1Q16890 204 aaPredicted RBP17.54■□□□□ 0.4
CNKSR2-203ENST00000425654 CPLX2Q6PUV4 134 aaKnown RBP17.54■□□□□ 0.4
CNKSR2-203ENST00000425654 VPS53Q5VIR6 699 aa17.54■□□□□ 0.4
CNKSR2-203ENST00000425654 CNTLNQ9NXG0 1405 aa17.53■□□□□ 0.4
CNKSR2-203ENST00000425654 RAD54L2Q9Y4B4 1467 aa17.53■□□□□ 0.4
CNKSR2-203ENST00000425654 GNAI1P63096 354 aa17.53■□□□□ 0.4
CNKSR2-203ENST00000425654 CYB5RLQ6IPT4 315 aa17.53■□□□□ 0.4
CNKSR2-203ENST00000425654 OSCARQ8IYS5 282 aa17.52■□□□□ 0.4
CNKSR2-203ENST00000425654 BECN2A8MW95 431 aa17.52■□□□□ 0.4
CNKSR2-203ENST00000425654 LRRC9Q6ZRR7 1453 aa17.52■□□□□ 0.4
CNKSR2-203ENST00000425654 PSME1Q06323 249 aa17.52■□□□□ 0.39
CNKSR2-203ENST00000425654 FKBP5Q13451 457 aaPredicted RBP17.52■□□□□ 0.39
CNKSR2-203ENST00000425654 ZNF644Q9H582 1327 aaPredicted RBP17.51■□□□□ 0.39
CNKSR2-203ENST00000425654 FOXD4L6Q3SYB3 417 aaPredicted RBP17.51■□□□□ 0.39
CNKSR2-203ENST00000425654 FOXD4L3Q6VB84 417 aaPredicted RBP17.51■□□□□ 0.39
CNKSR2-203ENST00000425654 A0A0U1RQG5 324 aaPredicted RBP17.51■□□□□ 0.39
CNKSR2-203ENST00000425654 MCTP1Q6DN14 999 aa17.51■□□□□ 0.39
CNKSR2-203ENST00000425654 ANO2Q9NQ90 1003 aa17.51■□□□□ 0.39
CNKSR2-203ENST00000425654 KIF21BO75037 1637 aa17.51■□□□□ 0.39
CNKSR2-203ENST00000425654 ANKRD50Q9ULJ7 1429 aa17.51■□□□□ 0.39
CNKSR2-203ENST00000425654 NECTIN2Q92692 538 aa17.51■□□□□ 0.39
CNKSR2-203ENST00000425654 CEP89Q96ST8 783 aa17.51■□□□□ 0.39
CNKSR2-203ENST00000425654 FYCO1Q9BQS8 1478 aa17.5■□□□□ 0.39
CNKSR2-203ENST00000425654 PES1O00541 588 aaKnown RBP17.5■□□□□ 0.39
CNKSR2-203ENST00000425654 AAMPQ13685 434 aa17.5■□□□□ 0.39
CNKSR2-203ENST00000425654 TSR1Q2NL82 804 aaKnown RBP17.5■□□□□ 0.39
CNKSR2-203ENST00000425654 PRDM2Q13029 1718 aa17.5■□□□□ 0.39
CNKSR2-203ENST00000425654 AMOTL1Q8IY63 956 aa17.49■□□□□ 0.39
CNKSR2-203ENST00000425654 G3BP1Q13283 466 aaKnown RBP eCLIP17.49■□□□□ 0.39
CNKSR2-203ENST00000425654 TRIM29Q14134 588 aa17.49■□□□□ 0.39
CNKSR2-203ENST00000425654 RNF20Q5VTR2 975 aa17.49■□□□□ 0.39
CNKSR2-203ENST00000425654 NOL10Q9BSC4 688 aaKnown RBP17.49■□□□□ 0.39
CNKSR2-203ENST00000425654 INTS3Q68E01 1043 aaKnown RBP17.48■□□□□ 0.39
CNKSR2-203ENST00000425654 TSPYL4Q9UJ04 414 aa17.48■□□□□ 0.39
CNKSR2-203ENST00000425654 HSP90AB4PQ58FF6 505 aa17.48■□□□□ 0.39
CNKSR2-203ENST00000425654 CHMP5Q9NZZ3 219 aa17.48■□□□□ 0.39
CNKSR2-203ENST00000425654 TPM2P07951 284 aa17.47■□□□□ 0.39
CNKSR2-203ENST00000425654 CASKIN1Q8WXD9 1431 aa17.47■□□□□ 0.39
CNKSR2-203ENST00000425654 TPM1P09493 284 aa17.47■□□□□ 0.39
CNKSR2-203ENST00000425654 NCOA2Q15596 1464 aa17.47■□□□□ 0.39
CNKSR2-203ENST00000425654 CPLX1O14810 134 aa17.45■□□□□ 0.38
CNKSR2-203ENST00000425654 BRD4O60885 1362 aaPredicted RBP17.45■□□□□ 0.38
CNKSR2-203ENST00000425654 APPP05067 770 aa17.45■□□□□ 0.38
CNKSR2-203ENST00000425654 HMOX1P09601 288 aa17.45■□□□□ 0.38
CNKSR2-203ENST00000425654 AMER1Q5JTC6 1135 aaPredicted RBP17.45■□□□□ 0.38
CNKSR2-203ENST00000425654 PDE4CQ08493 712 aa17.44■□□□□ 0.38
CNKSR2-203ENST00000425654 TRDNQ13061 729 aa17.44■□□□□ 0.38
CNKSR2-203ENST00000425654 ERC2O15083 957 aa17.44■□□□□ 0.38
CNKSR2-203ENST00000425654 HSP90AA2PQ14568 343 aaPredicted RBP17.44■□□□□ 0.38
CNKSR2-203ENST00000425654 GGNBP2Q9H3C7 697 aa17.44■□□□□ 0.38
CNKSR2-203ENST00000425654 TNNT3P45378 269 aaPredicted RBP17.43■□□□□ 0.38
CNKSR2-203ENST00000425654 RRBP1Q9P2E9 1410 aaKnown RBP17.42■□□□□ 0.38
CNKSR2-203ENST00000425654 LNPKQ9C0E8 428 aa17.42■□□□□ 0.38
CNKSR2-203ENST00000425654 CABP2Q9NPB3 220 aa17.42■□□□□ 0.38
CNKSR2-203ENST00000425654 RAPGEF4Q8WZA2 1011 aa17.42■□□□□ 0.38
CNKSR2-203ENST00000425654 NUCB2P80303 420 aa17.42■□□□□ 0.38
CNKSR2-203ENST00000425654 FAM69CQ0P6D2 419 aa17.41■□□□□ 0.38
CNKSR2-203ENST00000425654 VPS37DQ86XT2 251 aa17.41■□□□□ 0.38
CNKSR2-203ENST00000425654 TRIM34Q9BYJ4 488 aa17.41■□□□□ 0.38
CNKSR2-203ENST00000425654 BICD2Q8TD16 824 aa17.41■□□□□ 0.38
CNKSR2-203ENST00000425654 SMC3Q9UQE7 1217 aa17.41■□□□□ 0.38
CNKSR2-203ENST00000425654 ARHGAP5Q13017 1502 aa17.41■□□□□ 0.38
CNKSR2-203ENST00000425654 CCDC47Q96A33 483 aaKnown RBP17.4■□□□□ 0.38
CNKSR2-203ENST00000425654 SYTL4Q96C24 671 aaPredicted RBP17.4■□□□□ 0.38
CNKSR2-203ENST00000425654 C22orf23Q9BZE7 217 aa17.4■□□□□ 0.38
CNKSR2-203ENST00000425654 HOOK1Q9UJC3 728 aaKnown RBP17.4■□□□□ 0.38
CNKSR2-203ENST00000425654 AQRO60306 1485 aaKnown RBP eCLIP17.4■□□□□ 0.38
CNKSR2-203ENST00000425654 PANK1Q8TE04 598 aa17.4■□□□□ 0.38
CNKSR2-203ENST00000425654 MSH5O43196 834 aa17.39■□□□□ 0.37
CNKSR2-203ENST00000425654 WASHC2AQ641Q2 1341 aa17.39■□□□□ 0.37
CNKSR2-203ENST00000425654 ADAMTS8Q9UP79 889 aa17.38■□□□□ 0.37
CNKSR2-203ENST00000425654 ANKRD20A12PQ8NF67 263 aa17.38■□□□□ 0.37
CNKSR2-203ENST00000425654 NFXL1Q6ZNB6 911 aa17.38■□□□□ 0.37
CNKSR2-203ENST00000425654 RIC3Q7Z5B4 369 aa17.38■□□□□ 0.37
CNKSR2-203ENST00000425654 ERICH2A1L162 156 aa17.38■□□□□ 0.37
CNKSR2-203ENST00000425654 VPS37CA5D8V6 355 aaPredicted RBP17.38■□□□□ 0.37
CNKSR2-203ENST00000425654 CDC45O75419 566 aa17.38■□□□□ 0.37
CNKSR2-203ENST00000425654 TMEM132EQ6IEE7 984 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms