RNA–Protein interactions for RNA: ENST00000425254.2

LINC01534-201, Transcript of long intergenic non-protein coding RNA 1534, humanhuman

TSL 2 BASIC

Gene LINC01534, Length 815 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01534-201ENST00000425254 KIF1BO60333 1816 aa22.68■■□□□ 1.22
LINC01534-201ENST00000425254 NUTM2DQ5VT03 806 aaPredicted RBP22.68■■□□□ 1.22
LINC01534-201ENST00000425254 MYO5BQ9ULV0 1848 aa22.68■■□□□ 1.22
LINC01534-201ENST00000425254 NEXMIFQ5QGS0 1516 aa22.66■■□□□ 1.22
LINC01534-201ENST00000425254 RPGRIP1LQ68CZ1 1315 aa22.65■■□□□ 1.22
LINC01534-201ENST00000425254 NCKAP5LQ9HCH0 1330 aa22.65■■□□□ 1.22
LINC01534-201ENST00000425254 TXNDC2Q86VQ3 553 aa22.65■■□□□ 1.22
LINC01534-201ENST00000425254 L3MBTL2Q969R5 705 aa22.64■■□□□ 1.21
LINC01534-201ENST00000425254 ANKLE2Q86XL3 938 aa22.63■■□□□ 1.21
LINC01534-201ENST00000425254 SCAF11Q99590 1463 aaKnown RBP22.62■■□□□ 1.21
LINC01534-201ENST00000425254 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.61■■□□□ 1.21
LINC01534-201ENST00000425254 DCAF11Q8TEB1 546 aa22.61■■□□□ 1.21
LINC01534-201ENST00000425254 EID1Q9Y6B2 187 aa22.61■■□□□ 1.21
LINC01534-201ENST00000425254 ADGRF5Q8IZF2 1346 aa22.59■■□□□ 1.21
LINC01534-201ENST00000425254 HDGFP51858 240 aaKnown RBP22.58■■□□□ 1.21
LINC01534-201ENST00000425254 KDM2AQ9Y2K7 1162 aa22.58■■□□□ 1.21
LINC01534-201ENST00000425254 TONSLQ96HA7 1378 aa22.58■■□□□ 1.21
LINC01534-201ENST00000425254 VGFO15240 615 aaPredicted RBP22.57■■□□□ 1.2
LINC01534-201ENST00000425254 PPP1R15AO75807 674 aaPredicted RBP22.57■■□□□ 1.2
LINC01534-201ENST00000425254 PPLO60437 1756 aa22.56■■□□□ 1.2
LINC01534-201ENST00000425254 MED14O60244 1454 aa22.55■■□□□ 1.2
LINC01534-201ENST00000425254 MYOM2P54296 1465 aa22.55■■□□□ 1.2
LINC01534-201ENST00000425254 PLEKHG1Q9ULL1 1385 aa22.55■■□□□ 1.2
LINC01534-201ENST00000425254 IFT172Q9UG01 1749 aa22.55■■□□□ 1.2
LINC01534-201ENST00000425254 STRCQ7RTU9 1775 aa22.55■■□□□ 1.2
LINC01534-201ENST00000425254 NPHP4O75161 1426 aaPredicted RBP22.55■■□□□ 1.2
LINC01534-201ENST00000425254 NRXN1Q9ULB1 1477 aa22.54■■□□□ 1.2
LINC01534-201ENST00000425254 STAC3Q96MF2 364 aa22.51■■□□□ 1.19
LINC01534-201ENST00000425254 TIMELESSQ9UNS1 1208 aa22.51■■□□□ 1.19
LINC01534-201ENST00000425254 PIK3C2GO75747 1445 aa22.5■■□□□ 1.19
LINC01534-201ENST00000425254 ADAMTS13Q76LX8 1427 aa22.5■■□□□ 1.19
LINC01534-201ENST00000425254 POLR1AO95602 1720 aaPredicted RBP22.49■■□□□ 1.19
LINC01534-201ENST00000425254 SLC26A8Q96RN1 970 aa22.49■■□□□ 1.19
LINC01534-201ENST00000425254 BCANQ96GW7 911 aa22.48■■□□□ 1.19
LINC01534-201ENST00000425254 NRXN3Q9Y4C0 1643 aa22.48■■□□□ 1.19
LINC01534-201ENST00000425254 PRAG1Q86YV5 1406 aa22.48■■□□□ 1.19
LINC01534-201ENST00000425254 SETBP1Q9Y6X0 1596 aa22.47■■□□□ 1.19
LINC01534-201ENST00000425254 NBPF8Q3BBV2 869 aa22.47■■□□□ 1.19
LINC01534-201ENST00000425254 CFAP70Q5T0N1 1121 aa22.45■■□□□ 1.18
LINC01534-201ENST00000425254 IQGAP1P46940 1657 aa22.45■■□□□ 1.18
LINC01534-201ENST00000425254 C14orf93Q9H972 538 aaKnown RBP22.44■■□□□ 1.18
LINC01534-201ENST00000425254 TBX22Q9Y458 520 aa22.44■■□□□ 1.18
LINC01534-201ENST00000425254 DMRT2Q9Y5R5 561 aa22.43■■□□□ 1.18
LINC01534-201ENST00000425254 ALKQ9UM73 1620 aa22.42■■□□□ 1.18
LINC01534-201ENST00000425254 METP08581 1390 aa22.41■■□□□ 1.18
LINC01534-201ENST00000425254 ASXL1Q8IXJ9 1541 aa22.38■■□□□ 1.17
LINC01534-201ENST00000425254 NBPF1Q3BBV0 1214 aa22.38■■□□□ 1.17
LINC01534-201ENST00000425254 TMEM132EQ6IEE7 984 aa22.38■■□□□ 1.17
LINC01534-201ENST00000425254 DIP2AQ14689 1571 aa22.38■■□□□ 1.17
LINC01534-201ENST00000425254 PTPRUQ92729 1446 aa22.37■■□□□ 1.17
LINC01534-201ENST00000425254 SETD1AO15047 1707 aaKnown RBP22.37■■□□□ 1.17
LINC01534-201ENST00000425254 ADGRB1O14514 1584 aa22.34■■□□□ 1.17
LINC01534-201ENST00000425254 ZNF335Q9H4Z2 1342 aaPredicted RBP22.33■■□□□ 1.17
LINC01534-201ENST00000425254 PIK3R4Q99570 1358 aa22.32■■□□□ 1.16
LINC01534-201ENST00000425254 KCNA6P17658 529 aa22.31■■□□□ 1.16
LINC01534-201ENST00000425254 LAMC1P11047 1609 aa22.31■■□□□ 1.16
LINC01534-201ENST00000425254 TRPM1Q7Z4N2 1603 aa22.31■■□□□ 1.16
LINC01534-201ENST00000425254 RALGAPBQ86X10 1494 aa22.3■■□□□ 1.16
LINC01534-201ENST00000425254 AMOTL2Q9Y2J4 779 aa22.3■■□□□ 1.16
LINC01534-201ENST00000425254 LRPPRCP42704 1394 aaKnown RBP22.29■■□□□ 1.16
LINC01534-201ENST00000425254 KIAA1210Q9ULL0 1709 aa22.28■■□□□ 1.16
LINC01534-201ENST00000425254 ROCK2O75116 1388 aaKnown RBP22.28■■□□□ 1.16
LINC01534-201ENST00000425254 STK26Q9P289 416 aa22.28■■□□□ 1.16
LINC01534-201ENST00000425254 YTHDC2Q9H6S0 1430 aaKnown RBP22.28■■□□□ 1.16
LINC01534-201ENST00000425254 GPRASP1Q5JY77 1395 aa22.27■■□□□ 1.16
LINC01534-201ENST00000425254 ABCC11Q96J66 1382 aa22.25■■□□□ 1.15
LINC01534-201ENST00000425254 NWD1Q149M9 1564 aa22.25■■□□□ 1.15
LINC01534-201ENST00000425254 XRN1Q8IZH2 1706 aaKnown RBP22.24■■□□□ 1.15
LINC01534-201ENST00000425254 STRCP1A6NGW2 1772 aa22.24■■□□□ 1.15
LINC01534-201ENST00000425254 ROBO2Q9HCK4 1378 aa22.24■■□□□ 1.15
LINC01534-201ENST00000425254 TECPR2O15040 1411 aa22.23■■□□□ 1.15
LINC01534-201ENST00000425254 CHD2O14647 1828 aaKnown RBP22.23■■□□□ 1.15
LINC01534-201ENST00000425254 TRAK1Q9UPV9 953 aa22.23■■□□□ 1.15
LINC01534-201ENST00000425254 LTBP4Q8N2S1 1624 aa22.22■■□□□ 1.15
LINC01534-201ENST00000425254 CARD11Q9BXL7 1154 aa22.22■■□□□ 1.15
LINC01534-201ENST00000425254 ZEB1P37275 1124 aaPredicted RBP22.2■■□□□ 1.14
LINC01534-201ENST00000425254 RBM33Q96EV2 1170 aaKnown RBP22.2■■□□□ 1.14
LINC01534-201ENST00000425254 PLEKHH1Q9ULM0 1364 aa22.19■■□□□ 1.14
LINC01534-201ENST00000425254 PTCH1Q13635 1447 aa22.19■■□□□ 1.14
LINC01534-201ENST00000425254 NKTRP30414 1462 aaKnown RBP22.19■■□□□ 1.14
LINC01534-201ENST00000425254 WAPLQ7Z5K2 1190 aa22.18■■□□□ 1.14
LINC01534-201ENST00000425254 CPS1P31327 1500 aa22.17■■□□□ 1.14
LINC01534-201ENST00000425254 LRRC7Q96NW7 1537 aa22.17■■□□□ 1.14
LINC01534-201ENST00000425254 DLC1Q96QB1 1528 aa22.17■■□□□ 1.14
LINC01534-201ENST00000425254 PROSER2Q86WR7 435 aaPredicted RBP22.17■■□□□ 1.14
LINC01534-201ENST00000425254 SIRT1Q96EB6 747 aa22.17■■□□□ 1.14
LINC01534-201ENST00000425254 PRAM1Q96QH2 718 aa22.16■■□□□ 1.14
LINC01534-201ENST00000425254 FAM135BQ49AJ0 1406 aa22.15■■□□□ 1.14
LINC01534-201ENST00000425254 TMEM94Q12767 1356 aa22.15■■□□□ 1.14
LINC01534-201ENST00000425254 KNDC1Q76NI1 1749 aa22.15■■□□□ 1.14
LINC01534-201ENST00000425254 SAFB2Q14151 953 aaKnown RBP eCLIP22.12■■□□□ 1.13
LINC01534-201ENST00000425254 POGKQ9P215 609 aa22.11■■□□□ 1.13
LINC01534-201ENST00000425254 USP47Q96K76 1375 aa22.11■■□□□ 1.13
LINC01534-201ENST00000425254 ARHGEF28Q8N1W1 1705 aaKnown RBP22.1■■□□□ 1.13
LINC01534-201ENST00000425254 CENPJQ9HC77 1338 aaPredicted RBP22.08■■□□□ 1.13
LINC01534-201ENST00000425254 ST20-MTHFSA0A0A6YYL1 179 aa22.07■■□□□ 1.12
LINC01534-201ENST00000425254 NCOA3Q9Y6Q9 1424 aa22.06■■□□□ 1.12
LINC01534-201ENST00000425254 EIF3AQ14152 1382 aaKnown RBP22.06■■□□□ 1.12
LINC01534-201ENST00000425254 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.06■■□□□ 1.12
LINC01534-201ENST00000425254 HSPA5P11021 654 aaKnown RBP22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms