RNA–Protein interactions for RNA: ENST00000425203.1

LIMK2-205, Transcript of LIM domain kinase 2, humanhuman

TSL 1 (best)

Gene LIMK2, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-205ENST00000425203 NKTRP30414 1462 aaKnown RBP23.38■■□□□ 1.33
LIMK2-205ENST00000425203 ADGRB3O60242 1522 aa23.37■■□□□ 1.33
LIMK2-205ENST00000425203 ROBO1Q9Y6N7 1651 aa23.36■■□□□ 1.33
LIMK2-205ENST00000425203 PPP1R15AO75807 674 aaPredicted RBP23.36■■□□□ 1.33
LIMK2-205ENST00000425203 FAM50AQ14320 339 aaKnown RBP23.36■■□□□ 1.33
LIMK2-205ENST00000425203 ADGRL2O95490 1459 aa23.36■■□□□ 1.33
LIMK2-205ENST00000425203 RPRD2Q5VT52 1461 aaKnown RBP23.36■■□□□ 1.33
LIMK2-205ENST00000425203 TBX22Q9Y458 520 aa23.35■■□□□ 1.33
LIMK2-205ENST00000425203 PLEKHG1Q9ULL1 1385 aa23.35■■□□□ 1.33
LIMK2-205ENST00000425203 ANKRD50Q9ULJ7 1429 aa23.34■■□□□ 1.33
LIMK2-205ENST00000425203 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.33■■□□□ 1.33
LIMK2-205ENST00000425203 ZFYVE9O95405 1425 aa23.33■■□□□ 1.32
LIMK2-205ENST00000425203 NWD1Q149M9 1564 aa23.32■■□□□ 1.32
LIMK2-205ENST00000425203 RIMS2Q9UQ26 1411 aa23.32■■□□□ 1.32
LIMK2-205ENST00000425203 JCADQ9P266 1359 aa23.31■■□□□ 1.32
LIMK2-205ENST00000425203 NCOA3Q9Y6Q9 1424 aa23.29■■□□□ 1.32
LIMK2-205ENST00000425203 CHGAP10645 457 aaKnown RBP23.28■■□□□ 1.32
LIMK2-205ENST00000425203 CHD2O14647 1828 aaKnown RBP23.26■■□□□ 1.31
LIMK2-205ENST00000425203 C14orf37Q86TY3 774 aa23.26■■□□□ 1.31
LIMK2-205ENST00000425203 C19orf44Q9H6X5 657 aa23.26■■□□□ 1.31
LIMK2-205ENST00000425203 CADPS2Q86UW7 1296 aa23.25■■□□□ 1.31
LIMK2-205ENST00000425203 TMEM131LA2VDJ0 1609 aa23.22■■□□□ 1.31
LIMK2-205ENST00000425203 PHLPP1O60346 1717 aa23.22■■□□□ 1.31
LIMK2-205ENST00000425203 ATF3P18847 181 aa23.22■■□□□ 1.31
LIMK2-205ENST00000425203 NUTM2DQ5VT03 806 aaPredicted RBP23.22■■□□□ 1.31
LIMK2-205ENST00000425203 SPATA31A6Q5VVP1 1343 aa23.21■■□□□ 1.31
LIMK2-205ENST00000425203 PIK3R4Q99570 1358 aa23.21■■□□□ 1.31
LIMK2-205ENST00000425203 MYO5BQ9ULV0 1848 aa23.2■■□□□ 1.3
LIMK2-205ENST00000425203 ADAMTS13Q76LX8 1427 aa23.19■■□□□ 1.3
LIMK2-205ENST00000425203 ZNF772Q68DY9 489 aaPredicted RBP23.18■■□□□ 1.3
LIMK2-205ENST00000425203 GCC2Q8IWJ2 1684 aa23.18■■□□□ 1.3
LIMK2-205ENST00000425203 MEX3CQ5U5Q3 659 aaKnown RBP23.17■■□□□ 1.3
LIMK2-205ENST00000425203 AMOTL2Q9Y2J4 779 aa23.17■■□□□ 1.3
LIMK2-205ENST00000425203 COL16A1Q07092 1604 aaPredicted RBP23.15■■□□□ 1.3
LIMK2-205ENST00000425203 ROCK1Q13464 1354 aa23.14■■□□□ 1.3
LIMK2-205ENST00000425203 NUP155O75694 1391 aa23.13■■□□□ 1.29
LIMK2-205ENST00000425203 UNC13BO14795 1591 aa23.12■■□□□ 1.29
LIMK2-205ENST00000425203 DIP2AQ14689 1571 aa23.12■■□□□ 1.29
LIMK2-205ENST00000425203 BRINP3Q76B58 766 aa23.11■■□□□ 1.29
LIMK2-205ENST00000425203 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.11■■□□□ 1.29
LIMK2-205ENST00000425203 E9PCH4 1651 aa23.1■■□□□ 1.29
LIMK2-205ENST00000425203 LRP6O75581 1613 aa23.09■■□□□ 1.29
LIMK2-205ENST00000425203 AHDC1Q5TGY3 1603 aaPredicted RBP23.08■■□□□ 1.29
LIMK2-205ENST00000425203 PTPRUQ92729 1446 aa23.08■■□□□ 1.28
LIMK2-205ENST00000425203 RXRBP28702 533 aa23.07■■□□□ 1.28
LIMK2-205ENST00000425203 UPF1Q92900 1129 aaKnown RBP eCLIP23.07■■□□□ 1.28
LIMK2-205ENST00000425203 TRPM2O94759 1503 aa23.07■■□□□ 1.28
LIMK2-205ENST00000425203 TRIM52Q96A61 297 aa23.06■■□□□ 1.28
LIMK2-205ENST00000425203 IQGAP3Q86VI3 1631 aa23.05■■□□□ 1.28
LIMK2-205ENST00000425203 NUTM2BA6NNL0 878 aaPredicted RBP23.04■■□□□ 1.28
LIMK2-205ENST00000425203 NUTM2EB1AL46 878 aaPredicted RBP23.04■■□□□ 1.28
LIMK2-205ENST00000425203 NUTM2AQ8IVF1 878 aaPredicted RBP23.04■■□□□ 1.28
LIMK2-205ENST00000425203 DCCP43146 1447 aa23.04■■□□□ 1.28
LIMK2-205ENST00000425203 SETD1AO15047 1707 aaKnown RBP23.04■■□□□ 1.28
LIMK2-205ENST00000425203 ITGAEP38570 1179 aa23.03■■□□□ 1.28
LIMK2-205ENST00000425203 ZNF326Q5BKZ1 582 aaKnown RBP23.03■■□□□ 1.28
LIMK2-205ENST00000425203 LRRC59Q96AG4 307 aaKnown RBP23.03■■□□□ 1.28
LIMK2-205ENST00000425203 SHPRHQ149N8 1683 aa23.02■■□□□ 1.28
LIMK2-205ENST00000425203 SETD5Q9C0A6 1442 aa22.99■■□□□ 1.27
LIMK2-205ENST00000425203 METP08581 1390 aa22.97■■□□□ 1.27
LIMK2-205ENST00000425203 AFF2P51816 1311 aa22.96■■□□□ 1.27
LIMK2-205ENST00000425203 MST1RQ04912 1400 aa22.96■■□□□ 1.27
LIMK2-205ENST00000425203 SETBP1Q9Y6X0 1596 aa22.95■■□□□ 1.26
LIMK2-205ENST00000425203 ASXL1Q8IXJ9 1541 aa22.94■■□□□ 1.26
LIMK2-205ENST00000425203 CDK12Q9NYV4 1490 aaPredicted RBP22.93■■□□□ 1.26
LIMK2-205ENST00000425203 QTRT2Q9H974 415 aaKnown RBP22.93■■□□□ 1.26
LIMK2-205ENST00000425203 XRN1Q8IZH2 1706 aaKnown RBP22.92■■□□□ 1.26
LIMK2-205ENST00000425203 NRXN3Q9Y4C0 1643 aa22.92■■□□□ 1.26
LIMK2-205ENST00000425203 DDX17Q92841 729 aaKnown RBP22.91■■□□□ 1.26
LIMK2-205ENST00000425203 RBM6P78332 1123 aaKnown RBP22.9■■□□□ 1.26
LIMK2-205ENST00000425203 C8orf37Q96NL8 207 aa22.9■■□□□ 1.26
LIMK2-205ENST00000425203 ADGRL3Q9HAR2 1447 aa22.9■■□□□ 1.26
LIMK2-205ENST00000425203 PNPLA6Q8IY17 1366 aa22.88■■□□□ 1.25
LIMK2-205ENST00000425203 SPHKAPQ2M3C7 1700 aa22.87■■□□□ 1.25
LIMK2-205ENST00000425203 NHSL1Q5SYE7 1610 aa22.86■■□□□ 1.25
LIMK2-205ENST00000425203 VGFO15240 615 aaPredicted RBP22.86■■□□□ 1.25
LIMK2-205ENST00000425203 PPARGC1BQ86YN6 1023 aaKnown RBP22.86■■□□□ 1.25
LIMK2-205ENST00000425203 NGLY1Q96IV0 654 aa22.86■■□□□ 1.25
LIMK2-205ENST00000425203 NEXMIFQ5QGS0 1516 aa22.82■■□□□ 1.24
LIMK2-205ENST00000425203 C1orf167Q5SNV9 1468 aa22.82■■□□□ 1.24
LIMK2-205ENST00000425203 ADAMTS2O95450 1211 aa22.82■■□□□ 1.24
LIMK2-205ENST00000425203 ORAI2Q96SN7 254 aa22.81■■□□□ 1.24
LIMK2-205ENST00000425203 SOS2Q07890 1332 aaPredicted RBP22.81■■□□□ 1.24
LIMK2-205ENST00000425203 SRCAPQ6ZRS2 3230 aa22.8■■□□□ 1.24
LIMK2-205ENST00000425203 RPGRIP1LQ68CZ1 1315 aa22.79■■□□□ 1.24
LIMK2-205ENST00000425203 RGS12O14924 1447 aa22.78■■□□□ 1.24
LIMK2-205ENST00000425203 CLTCL1P53675 1640 aa22.78■■□□□ 1.24
LIMK2-205ENST00000425203 ROBO2Q9HCK4 1378 aa22.77■■□□□ 1.24
LIMK2-205ENST00000425203 PTCH1Q13635 1447 aa22.77■■□□□ 1.24
LIMK2-205ENST00000425203 USP21Q9UK80 565 aa22.76■■□□□ 1.23
LIMK2-205ENST00000425203 NALCNQ8IZF0 1738 aa22.76■■□□□ 1.23
LIMK2-205ENST00000425203 FNBP4Q8N3X1 1017 aaPredicted RBP22.75■■□□□ 1.23
LIMK2-205ENST00000425203 TRPC5Q9UL62 973 aaPredicted RBP22.75■■□□□ 1.23
LIMK2-205ENST00000425203 KIF1BO60333 1816 aa22.74■■□□□ 1.23
LIMK2-205ENST00000425203 NAIPQ13075 1403 aa22.74■■□□□ 1.23
LIMK2-205ENST00000425203 LAMC1P11047 1609 aa22.71■■□□□ 1.23
LIMK2-205ENST00000425203 SLC4A1APQ9BWU0 796 aaKnown RBP22.71■■□□□ 1.23
LIMK2-205ENST00000425203 HFM1A2PYH4 1435 aa22.71■■□□□ 1.23
LIMK2-205ENST00000425203 ESCO1Q5FWF5 840 aa22.7■■□□□ 1.22
LIMK2-205ENST00000425203 PRAG1Q86YV5 1406 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms