RNA–Protein interactions for RNA: ENST00000424555.5

SEMA3A-203, Transcript of semaphorin 3A, humanhuman

TSL 4

Gene SEMA3A, Length 568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-203ENST00000424555 IL21Q9HBE4 155 aa11.12□□□□□ -0.63
SEMA3A-203ENST00000424555 SMARCA2P51531 1590 aa11.11□□□□□ -0.63
SEMA3A-203ENST00000424555 LCE2BO14633 110 aa11.1□□□□□ -0.63
SEMA3A-203ENST00000424555 ZEB1P37275 1124 aaPredicted RBP11.1□□□□□ -0.63
SEMA3A-203ENST00000424555 PPP1R18Q6NYC8 613 aa11.1□□□□□ -0.63
SEMA3A-203ENST00000424555 NKX2-3Q8TAU0 364 aa11.1□□□□□ -0.63
SEMA3A-203ENST00000424555 KCNV2Q8TDN2 545 aa11.1□□□□□ -0.63
SEMA3A-203ENST00000424555 BICRAQ9NZM4 1560 aa11.1□□□□□ -0.63
SEMA3A-203ENST00000424555 UNC13AQ9UPW8 1703 aa11.09□□□□□ -0.63
SEMA3A-203ENST00000424555 RNF40O75150 1001 aa11.09□□□□□ -0.63
SEMA3A-203ENST00000424555 ARHGEF1Q92888 912 aaKnown RBP11.09□□□□□ -0.63
SEMA3A-203ENST00000424555 PEG3Q9GZU2 1588 aa11.08□□□□□ -0.64
SEMA3A-203ENST00000424555 HDGFP51858 240 aaKnown RBP11.07□□□□□ -0.64
SEMA3A-203ENST00000424555 Q6ZNB5 142 aa11.07□□□□□ -0.64
SEMA3A-203ENST00000424555 PRKD2Q9BZL6 878 aa11.06□□□□□ -0.64
SEMA3A-203ENST00000424555 PTGDRQ13258 359 aa11.04□□□□□ -0.64
SEMA3A-203ENST00000424555 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.03□□□□□ -0.64
SEMA3A-203ENST00000424555 GFRA3O60609 400 aa11.02□□□□□ -0.65
SEMA3A-203ENST00000424555 COPS2P61201 443 aa11.02□□□□□ -0.65
SEMA3A-203ENST00000424555 SLF2Q8IX21 1173 aa11.02□□□□□ -0.65
SEMA3A-203ENST00000424555 WRNQ14191 1432 aaPredicted RBP eCLIP11.01□□□□□ -0.65
SEMA3A-203ENST00000424555 EEA1Q15075 1411 aa11.01□□□□□ -0.65
SEMA3A-203ENST00000424555 LAPTM4AQ15012 233 aa10.98□□□□□ -0.65
SEMA3A-203ENST00000424555 FAM161AQ3B820 660 aa10.98□□□□□ -0.65
SEMA3A-203ENST00000424555 ADGRG1Q9Y653 693 aa10.98□□□□□ -0.65
SEMA3A-203ENST00000424555 V9GY48 417 aaPredicted RBP10.98□□□□□ -0.65
SEMA3A-203ENST00000424555 TNIKQ9UKE5 1360 aa10.98□□□□□ -0.65
SEMA3A-203ENST00000424555 ABCC8Q09428 1581 aa10.98□□□□□ -0.65
SEMA3A-203ENST00000424555 ZPR1O75312 459 aa10.96□□□□□ -0.65
SEMA3A-203ENST00000424555 NECTIN2Q92692 538 aa10.96□□□□□ -0.65
SEMA3A-203ENST00000424555 SOGA1O94964 1423 aa10.95□□□□□ -0.66
SEMA3A-203ENST00000424555 TRAF7Q6Q0C0 670 aa10.95□□□□□ -0.66
SEMA3A-203ENST00000424555 TMEM134Q9H6X4 195 aa10.95□□□□□ -0.66
SEMA3A-203ENST00000424555 ATAD2BQ9ULI0 1458 aa10.94□□□□□ -0.66
SEMA3A-203ENST00000424555 BLOC1S3Q6QNY0 202 aa10.94□□□□□ -0.66
SEMA3A-203ENST00000424555 NUTM2FA1L443 756 aa10.93□□□□□ -0.66
SEMA3A-203ENST00000424555 SEMA3EO15041 775 aa10.93□□□□□ -0.66
SEMA3A-203ENST00000424555 DNAJB2P25686 324 aa10.93□□□□□ -0.66
SEMA3A-203ENST00000424555 PLCB2Q00722 1185 aa10.93□□□□□ -0.66
SEMA3A-203ENST00000424555 EMID1Q96A84 441 aaPredicted RBP10.93□□□□□ -0.66
SEMA3A-203ENST00000424555 RCCD1A6NED2 376 aa10.92□□□□□ -0.66
SEMA3A-203ENST00000424555 NRG2O14511 850 aaPredicted RBP10.92□□□□□ -0.66
SEMA3A-203ENST00000424555 RBM46Q8TBY0 533 aaKnown RBP10.92□□□□□ -0.66
SEMA3A-203ENST00000424555 PCDHB3Q9Y5E6 796 aa10.92□□□□□ -0.66
SEMA3A-203ENST00000424555 TMUB1Q9BVT8 246 aa10.9□□□□□ -0.66
SEMA3A-203ENST00000424555 RUSC2Q8N2Y8 1516 aa10.89□□□□□ -0.67
SEMA3A-203ENST00000424555 SLC10A3P09131 477 aa10.89□□□□□ -0.67
SEMA3A-203ENST00000424555 CEP162Q5TB80 1403 aa10.89□□□□□ -0.67
SEMA3A-203ENST00000424555 RNF223E7ERA6 249 aa10.88□□□□□ -0.67
SEMA3A-203ENST00000424555 TLL1O43897 1013 aa10.88□□□□□ -0.67
SEMA3A-203ENST00000424555 SLC4A3P48751 1232 aa10.88□□□□□ -0.67
SEMA3A-203ENST00000424555 PRR14Q9BWN1 585 aa10.88□□□□□ -0.67
SEMA3A-203ENST00000424555 ACTN4O43707 911 aaKnown RBP10.87□□□□□ -0.67
SEMA3A-203ENST00000424555 GGCXP38435 758 aa10.87□□□□□ -0.67
SEMA3A-203ENST00000424555 PDZRN3Q9UPQ7 1066 aa10.87□□□□□ -0.67
SEMA3A-203ENST00000424555 FCHSD2O94868 740 aa10.86□□□□□ -0.67
SEMA3A-203ENST00000424555 TRIM67Q6ZTA4 783 aa10.86□□□□□ -0.67
SEMA3A-203ENST00000424555 GOLGA3Q08378 1498 aa10.85□□□□□ -0.67
SEMA3A-203ENST00000424555 CFHP08603 1231 aa10.84□□□□□ -0.67
SEMA3A-203ENST00000424555 PXYLP1Q8TE99 480 aa10.84□□□□□ -0.67
SEMA3A-203ENST00000424555 BAZ1BQ9UIG0 1483 aaKnown RBP10.83□□□□□ -0.68
SEMA3A-203ENST00000424555 PPEF1O14829 653 aaPredicted RBP10.83□□□□□ -0.68
SEMA3A-203ENST00000424555 SLC19A1P41440 591 aa10.82□□□□□ -0.68
SEMA3A-203ENST00000424555 RBM26Q5T8P6 1007 aaKnown RBP10.82□□□□□ -0.68
SEMA3A-203ENST00000424555 P3H3Q8IVL6 736 aa10.82□□□□□ -0.68
SEMA3A-203ENST00000424555 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.81□□□□□ -0.68
SEMA3A-203ENST00000424555 S1PR4O95977 384 aa10.81□□□□□ -0.68
SEMA3A-203ENST00000424555 FECHP22830 423 aa10.81□□□□□ -0.68
SEMA3A-203ENST00000424555 HAP1P54257 671 aaPredicted RBP10.81□□□□□ -0.68
SEMA3A-203ENST00000424555 KMT5BQ4FZB7 885 aa10.81□□□□□ -0.68
SEMA3A-203ENST00000424555 SYNJ1O43426 1573 aa10.81□□□□□ -0.68
SEMA3A-203ENST00000424555 NCAPD3P42695 1498 aa10.81□□□□□ -0.68
SEMA3A-203ENST00000424555 TESPA1A2RU30 521 aaPredicted RBP10.8□□□□□ -0.68
SEMA3A-203ENST00000424555 LIAT1Q6ZQX7 453 aa10.8□□□□□ -0.68
SEMA3A-203ENST00000424555 CEP164Q9UPV0 1460 aa10.8□□□□□ -0.68
SEMA3A-203ENST00000424555 KIF21BO75037 1637 aa10.8□□□□□ -0.68
SEMA3A-203ENST00000424555 GPR37O15354 613 aa10.78□□□□□ -0.68
SEMA3A-203ENST00000424555 OATP04181 439 aa10.78□□□□□ -0.68
SEMA3A-203ENST00000424555 SPRYD7Q5W111 196 aa10.78□□□□□ -0.68
SEMA3A-203ENST00000424555 METTL3Q86U44 580 aaKnown RBP10.78□□□□□ -0.68
SEMA3A-203ENST00000424555 SCUBE3Q8IX30 993 aa10.77□□□□□ -0.69
SEMA3A-203ENST00000424555 ANKLE1Q8NAG6 615 aa10.77□□□□□ -0.69
SEMA3A-203ENST00000424555 UBTFP17480 764 aaKnown RBP10.76□□□□□ -0.69
SEMA3A-203ENST00000424555 HIC1Q14526 733 aa10.76□□□□□ -0.69
SEMA3A-203ENST00000424555 PLA2G2CQ5R387 149 aa10.76□□□□□ -0.69
SEMA3A-203ENST00000424555 ADH1BP00325 375 aa10.75□□□□□ -0.69
SEMA3A-203ENST00000424555 PUS10Q3MIT2 529 aaKnown RBP10.75□□□□□ -0.69
SEMA3A-203ENST00000424555 HMGXB3Q12766 1538 aa10.74□□□□□ -0.69
SEMA3A-203ENST00000424555 ZNF598Q86UK7 904 aaKnown RBP10.74□□□□□ -0.69
SEMA3A-203ENST00000424555 TOP2BQ02880 1626 aa10.73□□□□□ -0.69
SEMA3A-203ENST00000424555 NR1I2O75469 434 aa10.73□□□□□ -0.69
SEMA3A-203ENST00000424555 NLRP7Q8WX94 980 aa10.72□□□□□ -0.69
SEMA3A-203ENST00000424555 GNPATO15228 680 aa10.71□□□□□ -0.69
SEMA3A-203ENST00000424555 CCER1Q8TC90 406 aaPredicted RBP10.71□□□□□ -0.69
SEMA3A-203ENST00000424555 PHOX2BQ99453 314 aa10.71□□□□□ -0.69
SEMA3A-203ENST00000424555 SLC6A16Q9GZN6 736 aa10.71□□□□□ -0.69
SEMA3A-203ENST00000424555 CLIP1P30622 1438 aa10.7□□□□□ -0.7
SEMA3A-203ENST00000424555 GDF9O60383 454 aa10.7□□□□□ -0.7
SEMA3A-203ENST00000424555 ZNF787Q6DD87 383 aa10.7□□□□□ -0.7
SEMA3A-203ENST00000424555 BIVM-ERCC5R4GMW8 1640 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms