RNA–Protein interactions for RNA: ENST00000424544.2

DDR1-234, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-234ENST00000424544 TMEM131LA2VDJ0 1609 aa24.69■■□□□ 1.54
DDR1-234ENST00000424544 XIRP1Q702N8 1843 aaKnown RBP24.68■■□□□ 1.54
DDR1-234ENST00000424544 HDGFP51858 240 aaKnown RBP24.67■■□□□ 1.54
DDR1-234ENST00000424544 PLEKHG1Q9ULL1 1385 aa24.66■■□□□ 1.54
DDR1-234ENST00000424544 RIMS2Q9UQ26 1411 aa24.65■■□□□ 1.54
DDR1-234ENST00000424544 TMEM94Q12767 1356 aa24.64■■□□□ 1.53
DDR1-234ENST00000424544 MYO5BQ9ULV0 1848 aa24.63■■□□□ 1.53
DDR1-234ENST00000424544 TBX22Q9Y458 520 aa24.63■■□□□ 1.53
DDR1-234ENST00000424544 PROSER2Q86WR7 435 aaPredicted RBP24.61■■□□□ 1.53
DDR1-234ENST00000424544 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.61■■□□□ 1.53
DDR1-234ENST00000424544 SOCS7O14512 581 aa24.6■■□□□ 1.53
DDR1-234ENST00000424544 NWD1Q149M9 1564 aa24.59■■□□□ 1.53
DDR1-234ENST00000424544 FAM135BQ49AJ0 1406 aa24.58■■□□□ 1.53
DDR1-234ENST00000424544 CHGAP10645 457 aaKnown RBP24.57■■□□□ 1.52
DDR1-234ENST00000424544 NAIPQ13075 1403 aa24.57■■□□□ 1.52
DDR1-234ENST00000424544 NKTRP30414 1462 aaKnown RBP24.57■■□□□ 1.52
DDR1-234ENST00000424544 ADAMTS13Q76LX8 1427 aa24.56■■□□□ 1.52
DDR1-234ENST00000424544 RBM33Q96EV2 1170 aaKnown RBP24.56■■□□□ 1.52
DDR1-234ENST00000424544 BCANQ96GW7 911 aa24.56■■□□□ 1.52
DDR1-234ENST00000424544 PPP1R15AO75807 674 aaPredicted RBP24.55■■□□□ 1.52
DDR1-234ENST00000424544 CHD2O14647 1828 aaKnown RBP24.54■■□□□ 1.52
DDR1-234ENST00000424544 NUTM2DQ5VT03 806 aaPredicted RBP24.53■■□□□ 1.52
DDR1-234ENST00000424544 SENP3Q9H4L4 574 aaPredicted RBP24.52■■□□□ 1.52
DDR1-234ENST00000424544 MED1Q15648 1581 aaPredicted RBP24.51■■□□□ 1.51
DDR1-234ENST00000424544 PIK3R4Q99570 1358 aa24.5■■□□□ 1.51
DDR1-234ENST00000424544 NCOA3Q9Y6Q9 1424 aa24.49■■□□□ 1.51
DDR1-234ENST00000424544 HFM1A2PYH4 1435 aa24.46■■□□□ 1.51
DDR1-234ENST00000424544 SPHKAPQ2M3C7 1700 aa24.45■■□□□ 1.5
DDR1-234ENST00000424544 SLAIN2Q9P270 581 aa24.45■■□□□ 1.5
DDR1-234ENST00000424544 MSH6P52701 1360 aa24.44■■□□□ 1.5
DDR1-234ENST00000424544 DIP2AQ14689 1571 aa24.44■■□□□ 1.5
DDR1-234ENST00000424544 PTPRUQ92729 1446 aa24.42■■□□□ 1.5
DDR1-234ENST00000424544 AMOTL2Q9Y2J4 779 aa24.41■■□□□ 1.5
DDR1-234ENST00000424544 TRPM2O94759 1503 aa24.4■■□□□ 1.5
DDR1-234ENST00000424544 C19orf44Q9H6X5 657 aa24.39■■□□□ 1.49
DDR1-234ENST00000424544 ROBO1Q9Y6N7 1651 aa24.39■■□□□ 1.49
DDR1-234ENST00000424544 SETBP1Q9Y6X0 1596 aa24.38■■□□□ 1.49
DDR1-234ENST00000424544 NRXN3Q9Y4C0 1643 aa24.38■■□□□ 1.49
DDR1-234ENST00000424544 CLTCL1P53675 1640 aa24.36■■□□□ 1.49
DDR1-234ENST00000424544 ZNF326Q5BKZ1 582 aaKnown RBP24.36■■□□□ 1.49
DDR1-234ENST00000424544 RGS17Q9UGC6 210 aaPredicted RBP24.36■■□□□ 1.49
DDR1-234ENST00000424544 TRIM52Q96A61 297 aa24.35■■□□□ 1.49
DDR1-234ENST00000424544 METP08581 1390 aa24.33■■□□□ 1.49
DDR1-234ENST00000424544 CADPS2Q86UW7 1296 aa24.33■■□□□ 1.49
DDR1-234ENST00000424544 SLC4A1APQ9BWU0 796 aaKnown RBP24.33■■□□□ 1.49
DDR1-234ENST00000424544 NEXMIFQ5QGS0 1516 aa24.33■■□□□ 1.49
DDR1-234ENST00000424544 PHF23Q9BUL5 403 aaPredicted RBP24.32■■□□□ 1.48
DDR1-234ENST00000424544 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.3■■□□□ 1.48
DDR1-234ENST00000424544 XRN1Q8IZH2 1706 aaKnown RBP24.28■■□□□ 1.48
DDR1-234ENST00000424544 ATF3P18847 181 aa24.28■■□□□ 1.48
DDR1-234ENST00000424544 C14orf37Q86TY3 774 aa24.28■■□□□ 1.48
DDR1-234ENST00000424544 RPGRIP1LQ68CZ1 1315 aa24.28■■□□□ 1.48
DDR1-234ENST00000424544 VGFO15240 615 aaPredicted RBP24.27■■□□□ 1.48
DDR1-234ENST00000424544 KIF1BO60333 1816 aa24.26■■□□□ 1.47
DDR1-234ENST00000424544 DCCP43146 1447 aa24.24■■□□□ 1.47
DDR1-234ENST00000424544 JCADQ9P266 1359 aa24.23■■□□□ 1.47
DDR1-234ENST00000424544 FOXD1Q16676 465 aa24.22■■□□□ 1.47
DDR1-234ENST00000424544 MPHOSPH9Q99550 1183 aa24.22■■□□□ 1.47
DDR1-234ENST00000424544 BRINP3Q76B58 766 aa24.21■■□□□ 1.47
DDR1-234ENST00000424544 PHLPP1O60346 1717 aa24.21■■□□□ 1.47
DDR1-234ENST00000424544 COL16A1Q07092 1604 aaPredicted RBP24.21■■□□□ 1.47
DDR1-234ENST00000424544 AHDC1Q5TGY3 1603 aaPredicted RBP24.18■■□□□ 1.46
DDR1-234ENST00000424544 MST1RQ04912 1400 aa24.17■■□□□ 1.46
DDR1-234ENST00000424544 PRAG1Q86YV5 1406 aa24.17■■□□□ 1.46
DDR1-234ENST00000424544 SETD1AO15047 1707 aaKnown RBP24.16■■□□□ 1.46
DDR1-234ENST00000424544 POTEAQ6S8J7 498 aa24.16■■□□□ 1.46
DDR1-234ENST00000424544 SPATA31E1Q6ZUB1 1445 aa24.16■■□□□ 1.46
DDR1-234ENST00000424544 ADGRL3Q9HAR2 1447 aa24.15■■□□□ 1.46
DDR1-234ENST00000424544 ACIN1Q9UKV3 1341 aaKnown RBP24.14■■□□□ 1.46
DDR1-234ENST00000424544 SPATA31A6Q5VVP1 1343 aa24.13■■□□□ 1.45
DDR1-234ENST00000424544 ROBO2Q9HCK4 1378 aa24.13■■□□□ 1.45
DDR1-234ENST00000424544 PTCH1Q13635 1447 aa24.12■■□□□ 1.45
DDR1-234ENST00000424544 PPLO60437 1756 aa24.12■■□□□ 1.45
DDR1-234ENST00000424544 ADGRF5Q8IZF2 1346 aa24.11■■□□□ 1.45
DDR1-234ENST00000424544 CCDC144AA2RUR9 1427 aa24.1■■□□□ 1.45
DDR1-234ENST00000424544 SETD5Q9C0A6 1442 aa24.1■■□□□ 1.45
DDR1-234ENST00000424544 ASXL1Q8IXJ9 1541 aa24.09■■□□□ 1.45
DDR1-234ENST00000424544 RGL3Q3MIN7 710 aa24.07■■□□□ 1.44
DDR1-234ENST00000424544 LRP6O75581 1613 aa24.06■■□□□ 1.44
DDR1-234ENST00000424544 ANKRD30BQ9BXX2 1392 aa24.06■■□□□ 1.44
DDR1-234ENST00000424544 NALCNQ8IZF0 1738 aa24.06■■□□□ 1.44
DDR1-234ENST00000424544 SHPRHQ149N8 1683 aa24.05■■□□□ 1.44
DDR1-234ENST00000424544 C1orf167Q5SNV9 1468 aa24.04■■□□□ 1.44
DDR1-234ENST00000424544 NHSL1Q5SYE7 1610 aa24.03■■□□□ 1.44
DDR1-234ENST00000424544 LRRC59Q96AG4 307 aaKnown RBP24.03■■□□□ 1.44
DDR1-234ENST00000424544 DDX17Q92841 729 aaKnown RBP24.02■■□□□ 1.44
DDR1-234ENST00000424544 ABCC11Q96J66 1382 aa24■■□□□ 1.43
DDR1-234ENST00000424544 TECPR2O15040 1411 aa24■■□□□ 1.43
DDR1-234ENST00000424544 IFT172Q9UG01 1749 aa23.99■■□□□ 1.43
DDR1-234ENST00000424544 ORAI2Q96SN7 254 aa23.99■■□□□ 1.43
DDR1-234ENST00000424544 RAB3GAP2Q9H2M9 1393 aa23.99■■□□□ 1.43
DDR1-234ENST00000424544 C14orf93Q9H972 538 aaKnown RBP23.98■■□□□ 1.43
DDR1-234ENST00000424544 SOS2Q07890 1332 aaPredicted RBP23.98■■□□□ 1.43
DDR1-234ENST00000424544 LRPPRCP42704 1394 aaKnown RBP23.98■■□□□ 1.43
DDR1-234ENST00000424544 PIK3C2GO75747 1445 aa23.98■■□□□ 1.43
DDR1-234ENST00000424544 LAMC1P11047 1609 aa23.98■■□□□ 1.43
DDR1-234ENST00000424544 TMEM132EQ6IEE7 984 aa23.97■■□□□ 1.43
DDR1-234ENST00000424544 HRCP23327 699 aa23.96■■□□□ 1.43
DDR1-234ENST00000424544 ZNF772Q68DY9 489 aaPredicted RBP23.95■■□□□ 1.42
DDR1-234ENST00000424544 WAPLQ7Z5K2 1190 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms