RNA–Protein interactions for RNA: ENST00000424393.5

TOP3B-203, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 824 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-203ENST00000424393 MPHOSPH9Q99550 1183 aa16.28■□□□□ 0.2
TOP3B-203ENST00000424393 ACIN1Q9UKV3 1341 aaKnown RBP16.27■□□□□ 0.2
TOP3B-203ENST00000424393 FOXD1Q16676 465 aa16.27■□□□□ 0.2
TOP3B-203ENST00000424393 ZFYVE9O95405 1425 aa16.27■□□□□ 0.19
TOP3B-203ENST00000424393 CHGAP10645 457 aaKnown RBP16.26■□□□□ 0.19
TOP3B-203ENST00000424393 PIP4K2BP78356 416 aa16.26■□□□□ 0.19
TOP3B-203ENST00000424393 TXNDC2Q86VQ3 553 aa16.26■□□□□ 0.19
TOP3B-203ENST00000424393 KIF1BO60333 1816 aa16.25■□□□□ 0.19
TOP3B-203ENST00000424393 HRCP23327 699 aa16.24■□□□□ 0.19
TOP3B-203ENST00000424393 EID1Q9Y6B2 187 aa16.24■□□□□ 0.19
TOP3B-203ENST00000424393 RIMS2Q9UQ26 1411 aa16.24■□□□□ 0.19
TOP3B-203ENST00000424393 TOM1O60784 492 aa16.21■□□□□ 0.19
TOP3B-203ENST00000424393 PHF23Q9BUL5 403 aaPredicted RBP16.21■□□□□ 0.19
TOP3B-203ENST00000424393 STRCP1A6NGW2 1772 aa16.19■□□□□ 0.18
TOP3B-203ENST00000424393 NEXMIFQ5QGS0 1516 aa16.19■□□□□ 0.18
TOP3B-203ENST00000424393 PLEKHG1Q9ULL1 1385 aa16.18■□□□□ 0.18
TOP3B-203ENST00000424393 HSPA1LP34931 641 aa16.18■□□□□ 0.18
TOP3B-203ENST00000424393 NUTM2DQ5VT03 806 aaPredicted RBP16.17■□□□□ 0.18
TOP3B-203ENST00000424393 CCDC144AA2RUR9 1427 aa16.17■□□□□ 0.18
TOP3B-203ENST00000424393 PPP1R15AO75807 674 aaPredicted RBP16.16■□□□□ 0.18
TOP3B-203ENST00000424393 HDGFP51858 240 aaKnown RBP16.16■□□□□ 0.18
TOP3B-203ENST00000424393 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.16■□□□□ 0.18
TOP3B-203ENST00000424393 SENP3Q9H4L4 574 aaPredicted RBP16.16■□□□□ 0.18
TOP3B-203ENST00000424393 TRIM26Q12899 539 aaPredicted RBP16.15■□□□□ 0.18
TOP3B-203ENST00000424393 ZNF326Q5BKZ1 582 aaKnown RBP16.15■□□□□ 0.18
TOP3B-203ENST00000424393 CPS1P31327 1500 aa16.14■□□□□ 0.18
TOP3B-203ENST00000424393 MED1Q15648 1581 aaPredicted RBP16.14■□□□□ 0.17
TOP3B-203ENST00000424393 PPLO60437 1756 aa16.14■□□□□ 0.17
TOP3B-203ENST00000424393 SLC26A8Q96RN1 970 aa16.14■□□□□ 0.17
TOP3B-203ENST00000424393 NRXN3Q9Y4C0 1643 aa16.14■□□□□ 0.17
TOP3B-203ENST00000424393 SPATA31E1Q6ZUB1 1445 aa16.13■□□□□ 0.17
TOP3B-203ENST00000424393 ADAMTS13Q76LX8 1427 aa16.13■□□□□ 0.17
TOP3B-203ENST00000424393 ANKRD30BQ9BXX2 1392 aa16.13■□□□□ 0.17
TOP3B-203ENST00000424393 IFT172Q9UG01 1749 aa16.11■□□□□ 0.17
TOP3B-203ENST00000424393 BCANQ96GW7 911 aa16.11■□□□□ 0.17
TOP3B-203ENST00000424393 DIP2AQ14689 1571 aa16.11■□□□□ 0.17
TOP3B-203ENST00000424393 SETBP1Q9Y6X0 1596 aa16.11■□□□□ 0.17
TOP3B-203ENST00000424393 NWD1Q149M9 1564 aa16.1■□□□□ 0.17
TOP3B-203ENST00000424393 CHD2O14647 1828 aaKnown RBP16.1■□□□□ 0.17
TOP3B-203ENST00000424393 RPGRIP1LQ68CZ1 1315 aa16.09■□□□□ 0.17
TOP3B-203ENST00000424393 LRRC7Q96NW7 1537 aa16.09■□□□□ 0.17
TOP3B-203ENST00000424393 TBX22Q9Y458 520 aa16.08■□□□□ 0.16
TOP3B-203ENST00000424393 RGL3Q3MIN7 710 aa16.07■□□□□ 0.16
TOP3B-203ENST00000424393 XIRP1Q702N8 1843 aaKnown RBP16.07■□□□□ 0.16
TOP3B-203ENST00000424393 SETD1AO15047 1707 aaKnown RBP16.06■□□□□ 0.16
TOP3B-203ENST00000424393 KCNA6P17658 529 aa16.06■□□□□ 0.16
TOP3B-203ENST00000424393 VGFO15240 615 aaPredicted RBP16.04■□□□□ 0.16
TOP3B-203ENST00000424393 NKTRP30414 1462 aaKnown RBP16.03■□□□□ 0.16
TOP3B-203ENST00000424393 PTPRUQ92729 1446 aa16.03■□□□□ 0.16
TOP3B-203ENST00000424393 PIK3R4Q99570 1358 aa16.03■□□□□ 0.16
TOP3B-203ENST00000424393 ALKQ9UM73 1620 aa16.02■□□□□ 0.16
TOP3B-203ENST00000424393 ADGRF5Q8IZF2 1346 aa16.02■□□□□ 0.16
TOP3B-203ENST00000424393 XRN1Q8IZH2 1706 aaKnown RBP16.02■□□□□ 0.15
TOP3B-203ENST00000424393 METP08581 1390 aa16.01■□□□□ 0.15
TOP3B-203ENST00000424393 DHX57Q6P158 1386 aaKnown RBP16■□□□□ 0.15
TOP3B-203ENST00000424393 MYOM2P54296 1465 aa16■□□□□ 0.15
TOP3B-203ENST00000424393 TMEM94Q12767 1356 aa15.99■□□□□ 0.15
TOP3B-203ENST00000424393 NRXN1Q9ULB1 1477 aa15.98■□□□□ 0.15
TOP3B-203ENST00000424393 PIK3C2GO75747 1445 aa15.98■□□□□ 0.15
TOP3B-203ENST00000424393 PROSER2Q86WR7 435 aaPredicted RBP15.98■□□□□ 0.15
TOP3B-203ENST00000424393 RBM33Q96EV2 1170 aaKnown RBP15.97■□□□□ 0.15
TOP3B-203ENST00000424393 AMOTL2Q9Y2J4 779 aa15.97■□□□□ 0.15
TOP3B-203ENST00000424393 ASXL1Q8IXJ9 1541 aa15.96■□□□□ 0.15
TOP3B-203ENST00000424393 LAMC1P11047 1609 aa15.93■□□□□ 0.14
TOP3B-203ENST00000424393 DCAF11Q8TEB1 546 aa15.92■□□□□ 0.14
TOP3B-203ENST00000424393 PCGF6Q9BYE7 350 aa15.92■□□□□ 0.14
TOP3B-203ENST00000424393 PRAG1Q86YV5 1406 aa15.92■□□□□ 0.14
TOP3B-203ENST00000424393 NCOA3Q9Y6Q9 1424 aa15.92■□□□□ 0.14
TOP3B-203ENST00000424393 SIN3AQ96ST3 1273 aa15.91■□□□□ 0.14
TOP3B-203ENST00000424393 C14orf93Q9H972 538 aaKnown RBP15.9■□□□□ 0.14
TOP3B-203ENST00000424393 KDM2AQ9Y2K7 1162 aa15.9■□□□□ 0.14
TOP3B-203ENST00000424393 PTCH1Q13635 1447 aa15.9■□□□□ 0.14
TOP3B-203ENST00000424393 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.9■□□□□ 0.14
TOP3B-203ENST00000424393 MSH6P52701 1360 aa15.89■□□□□ 0.13
TOP3B-203ENST00000424393 KNDC1Q76NI1 1749 aa15.89■□□□□ 0.13
TOP3B-203ENST00000424393 CFAP70Q5T0N1 1121 aa15.89■□□□□ 0.13
TOP3B-203ENST00000424393 ROBO2Q9HCK4 1378 aa15.88■□□□□ 0.13
TOP3B-203ENST00000424393 NALCNQ8IZF0 1738 aa15.88■□□□□ 0.13
TOP3B-203ENST00000424393 TMEM132EQ6IEE7 984 aa15.88■□□□□ 0.13
TOP3B-203ENST00000424393 STAC3Q96MF2 364 aa15.88■□□□□ 0.13
TOP3B-203ENST00000424393 TECPR2O15040 1411 aa15.87■□□□□ 0.13
TOP3B-203ENST00000424393 ADGRB1O14514 1584 aa15.87■□□□□ 0.13
TOP3B-203ENST00000424393 LRPPRCP42704 1394 aaKnown RBP15.87■□□□□ 0.13
TOP3B-203ENST00000424393 NEUROD1Q13562 356 aa15.86■□□□□ 0.13
TOP3B-203ENST00000424393 YTHDC2Q9H6S0 1430 aaKnown RBP15.85■□□□□ 0.13
TOP3B-203ENST00000424393 C14orf37Q86TY3 774 aa15.85■□□□□ 0.13
TOP3B-203ENST00000424393 ABCC11Q96J66 1382 aa15.85■□□□□ 0.13
TOP3B-203ENST00000424393 ADGRL3Q9HAR2 1447 aa15.85■□□□□ 0.13
TOP3B-203ENST00000424393 C19orf44Q9H6X5 657 aa15.84■□□□□ 0.13
TOP3B-203ENST00000424393 STK26Q9P289 416 aa15.84■□□□□ 0.13
TOP3B-203ENST00000424393 L3MBTL2Q969R5 705 aa15.83■□□□□ 0.12
TOP3B-203ENST00000424393 DCCP43146 1447 aa15.83■□□□□ 0.12
TOP3B-203ENST00000424393 ROBO1Q9Y6N7 1651 aa15.83■□□□□ 0.12
TOP3B-203ENST00000424393 KIAA1210Q9ULL0 1709 aa15.82■□□□□ 0.12
TOP3B-203ENST00000424393 FAM135BQ49AJ0 1406 aa15.81■□□□□ 0.12
TOP3B-203ENST00000424393 PLEKHH1Q9ULM0 1364 aa15.81■□□□□ 0.12
TOP3B-203ENST00000424393 DLC1Q96QB1 1528 aa15.8■□□□□ 0.12
TOP3B-203ENST00000424393 WAPLQ7Z5K2 1190 aa15.8■□□□□ 0.12
TOP3B-203ENST00000424393 CADPS2Q86UW7 1296 aa15.8■□□□□ 0.12
TOP3B-203ENST00000424393 SLAIN2Q9P270 581 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms