RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 ARHGAP23Q9P227 1491 aa16.34■□□□□ 0.21
USP49-204ENST00000423567 SLIT1O75093 1534 aa16.34■□□□□ 0.21
USP49-204ENST00000423567 NEURL4Q96JN8 1562 aa16.34■□□□□ 0.21
USP49-204ENST00000423567 HDGFP51858 240 aaKnown RBP16.33■□□□□ 0.2
USP49-204ENST00000423567 ZNF335Q9H4Z2 1342 aaPredicted RBP16.33■□□□□ 0.2
USP49-204ENST00000423567 ACIN1Q9UKV3 1341 aaKnown RBP16.33■□□□□ 0.2
USP49-204ENST00000423567 ADGRB3O60242 1522 aa16.33■□□□□ 0.2
USP49-204ENST00000423567 KDM5AP29375 1690 aaKnown RBP16.32■□□□□ 0.2
USP49-204ENST00000423567 SLC4A1APQ9BWU0 796 aaKnown RBP16.32■□□□□ 0.2
USP49-204ENST00000423567 LTKP29376 864 aa16.31■□□□□ 0.2
USP49-204ENST00000423567 PPP1R15AO75807 674 aaPredicted RBP16.29■□□□□ 0.2
USP49-204ENST00000423567 IQGAP1P46940 1657 aa16.29■□□□□ 0.2
USP49-204ENST00000423567 LTBP4Q8N2S1 1624 aa16.29■□□□□ 0.2
USP49-204ENST00000423567 SETD5Q9C0A6 1442 aa16.28■□□□□ 0.2
USP49-204ENST00000423567 BCANQ96GW7 911 aa16.28■□□□□ 0.2
USP49-204ENST00000423567 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.27■□□□□ 0.2
USP49-204ENST00000423567 SLC4A2P04920 1241 aa16.26■□□□□ 0.19
USP49-204ENST00000423567 RIMS2Q9UQ26 1411 aa16.26■□□□□ 0.19
USP49-204ENST00000423567 IQSEC2Q5JU85 1478 aa16.25■□□□□ 0.19
USP49-204ENST00000423567 CPS1P31327 1500 aa16.24■□□□□ 0.19
USP49-204ENST00000423567 TMEM131LA2VDJ0 1609 aa16.24■□□□□ 0.19
USP49-204ENST00000423567 SPHKAPQ2M3C7 1700 aa16.24■□□□□ 0.19
USP49-204ENST00000423567 ZNF326Q5BKZ1 582 aaKnown RBP16.23■□□□□ 0.19
USP49-204ENST00000423567 MPHOSPH9Q99550 1183 aa16.23■□□□□ 0.19
USP49-204ENST00000423567 TRPM2O94759 1503 aa16.23■□□□□ 0.19
USP49-204ENST00000423567 ZFYVE9O95405 1425 aa16.22■□□□□ 0.19
USP49-204ENST00000423567 U3KPZ7 1027 aaPredicted RBP16.21■□□□□ 0.19
USP49-204ENST00000423567 RAB3GAP2Q9H2M9 1393 aa16.21■□□□□ 0.19
USP49-204ENST00000423567 PLEKHG1Q9ULL1 1385 aa16.21■□□□□ 0.19
USP49-204ENST00000423567 SLC26A8Q96RN1 970 aa16.2■□□□□ 0.18
USP49-204ENST00000423567 NUTM2DQ5VT03 806 aaPredicted RBP16.19■□□□□ 0.18
USP49-204ENST00000423567 UBAP1LF5GYI3 381 aa16.17■□□□□ 0.18
USP49-204ENST00000423567 MYO5BQ9ULV0 1848 aa16.17■□□□□ 0.18
USP49-204ENST00000423567 CLTCL1P53675 1640 aa16.16■□□□□ 0.18
USP49-204ENST00000423567 CCDC144AA2RUR9 1427 aa16.16■□□□□ 0.18
USP49-204ENST00000423567 KCNA6P17658 529 aa16.15■□□□□ 0.18
USP49-204ENST00000423567 HRCP23327 699 aa16.15■□□□□ 0.18
USP49-204ENST00000423567 TBX22Q9Y458 520 aa16.14■□□□□ 0.17
USP49-204ENST00000423567 TOM1O60784 492 aa16.13■□□□□ 0.17
USP49-204ENST00000423567 RPGRIP1LQ68CZ1 1315 aa16.13■□□□□ 0.17
USP49-204ENST00000423567 LRRC7Q96NW7 1537 aa16.12■□□□□ 0.17
USP49-204ENST00000423567 KIF1BO60333 1816 aa16.11■□□□□ 0.17
USP49-204ENST00000423567 VGFO15240 615 aaPredicted RBP16.11■□□□□ 0.17
USP49-204ENST00000423567 PROSER2Q86WR7 435 aaPredicted RBP16.11■□□□□ 0.17
USP49-204ENST00000423567 DIP2AQ14689 1571 aa16.1■□□□□ 0.17
USP49-204ENST00000423567 ADAMTS13Q76LX8 1427 aa16.1■□□□□ 0.17
USP49-204ENST00000423567 PIK3R4Q99570 1358 aa16.09■□□□□ 0.17
USP49-204ENST00000423567 NKTRP30414 1462 aaKnown RBP16.09■□□□□ 0.17
USP49-204ENST00000423567 STRCP1A6NGW2 1772 aa16.08■□□□□ 0.17
USP49-204ENST00000423567 NEXMIFQ5QGS0 1516 aa16.08■□□□□ 0.16
USP49-204ENST00000423567 RGL3Q3MIN7 710 aa16.07■□□□□ 0.16
USP49-204ENST00000423567 TMEM94Q12767 1356 aa16.07■□□□□ 0.16
USP49-204ENST00000423567 NWD1Q149M9 1564 aa16.06■□□□□ 0.16
USP49-204ENST00000423567 PIP4K2BP78356 416 aa16.06■□□□□ 0.16
USP49-204ENST00000423567 SETBP1Q9Y6X0 1596 aa16.05■□□□□ 0.16
USP49-204ENST00000423567 SPATA31E1Q6ZUB1 1445 aa16.03■□□□□ 0.16
USP49-204ENST00000423567 C14orf37Q86TY3 774 aa16.03■□□□□ 0.16
USP49-204ENST00000423567 AMOTL2Q9Y2J4 779 aa16.03■□□□□ 0.16
USP49-204ENST00000423567 ANKRD30BQ9BXX2 1392 aa16.02■□□□□ 0.16
USP49-204ENST00000423567 RBM33Q96EV2 1170 aaKnown RBP16.02■□□□□ 0.16
USP49-204ENST00000423567 MSH6P52701 1360 aa16.01■□□□□ 0.15
USP49-204ENST00000423567 CHD2O14647 1828 aaKnown RBP16■□□□□ 0.15
USP49-204ENST00000423567 NRXN3Q9Y4C0 1643 aa16■□□□□ 0.15
USP49-204ENST00000423567 NCOA3Q9Y6Q9 1424 aa16■□□□□ 0.15
USP49-204ENST00000423567 METP08581 1390 aa16■□□□□ 0.15
USP49-204ENST00000423567 TRIM26Q12899 539 aaPredicted RBP15.98■□□□□ 0.15
USP49-204ENST00000423567 PTPRUQ92729 1446 aa15.98■□□□□ 0.15
USP49-204ENST00000423567 PPLO60437 1756 aa15.98■□□□□ 0.15
USP49-204ENST00000423567 ADGRF5Q8IZF2 1346 aa15.97■□□□□ 0.15
USP49-204ENST00000423567 C19orf44Q9H6X5 657 aa15.95■□□□□ 0.14
USP49-204ENST00000423567 ALKQ9UM73 1620 aa15.94■□□□□ 0.14
USP49-204ENST00000423567 XIRP1Q702N8 1843 aaKnown RBP15.94■□□□□ 0.14
USP49-204ENST00000423567 ATF3P18847 181 aa15.94■□□□□ 0.14
USP49-204ENST00000423567 HSPA1LP34931 641 aa15.94■□□□□ 0.14
USP49-204ENST00000423567 CADPS2Q86UW7 1296 aa15.93■□□□□ 0.14
USP49-204ENST00000423567 XRN1Q8IZH2 1706 aaKnown RBP15.93■□□□□ 0.14
USP49-204ENST00000423567 SLAIN2Q9P270 581 aa15.92■□□□□ 0.14
USP49-204ENST00000423567 PIK3C2GO75747 1445 aa15.92■□□□□ 0.14
USP49-204ENST00000423567 MYOM2P54296 1465 aa15.91■□□□□ 0.14
USP49-204ENST00000423567 STAC3Q96MF2 364 aa15.91■□□□□ 0.14
USP49-204ENST00000423567 PTCH1Q13635 1447 aa15.91■□□□□ 0.14
USP49-204ENST00000423567 FAM135BQ49AJ0 1406 aa15.91■□□□□ 0.14
USP49-204ENST00000423567 DCAF11Q8TEB1 546 aa15.9■□□□□ 0.14
USP49-204ENST00000423567 IFT172Q9UG01 1749 aa15.9■□□□□ 0.14
USP49-204ENST00000423567 C14orf93Q9H972 538 aaKnown RBP15.89■□□□□ 0.13
USP49-204ENST00000423567 KDM2AQ9Y2K7 1162 aa15.89■□□□□ 0.13
USP49-204ENST00000423567 DCCP43146 1447 aa15.88■□□□□ 0.13
USP49-204ENST00000423567 STK26Q9P289 416 aa15.88■□□□□ 0.13
USP49-204ENST00000423567 NRXN1Q9ULB1 1477 aa15.88■□□□□ 0.13
USP49-204ENST00000423567 SETD1AO15047 1707 aaKnown RBP15.88■□□□□ 0.13
USP49-204ENST00000423567 ROBO2Q9HCK4 1378 aa15.87■□□□□ 0.13
USP49-204ENST00000423567 PRAG1Q86YV5 1406 aa15.87■□□□□ 0.13
USP49-204ENST00000423567 ADGRL3Q9HAR2 1447 aa15.87■□□□□ 0.13
USP49-204ENST00000423567 TMEM132EQ6IEE7 984 aa15.87■□□□□ 0.13
USP49-204ENST00000423567 SPINK5Q9NQ38 1064 aaPredicted RBP15.87■□□□□ 0.13
USP49-204ENST00000423567 LRPPRCP42704 1394 aaKnown RBP15.87■□□□□ 0.13
USP49-204ENST00000423567 CFAP70Q5T0N1 1121 aa15.86■□□□□ 0.13
USP49-204ENST00000423567 DHX57Q6P158 1386 aaKnown RBP15.86■□□□□ 0.13
USP49-204ENST00000423567 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.85■□□□□ 0.13
USP49-204ENST00000423567 ABCC11Q96J66 1382 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms