RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 IFT140Q96RY7 1462 aa21.52■■□□□ 1.04
NPC1L1-203ENST00000423141 APAF1O14727 1248 aa21.52■■□□□ 1.04
NPC1L1-203ENST00000423141 RRAGDQ9NQL2 400 aaPredicted RBP21.51■■□□□ 1.03
NPC1L1-203ENST00000423141 ARHGEF5Q12774 1597 aa21.51■■□□□ 1.03
NPC1L1-203ENST00000423141 NKTRP30414 1462 aaKnown RBP21.5■■□□□ 1.03
NPC1L1-203ENST00000423141 ABCA8O94911 1581 aa21.5■■□□□ 1.03
NPC1L1-203ENST00000423141 VIRMAQ69YN4 1812 aaKnown RBP21.5■■□□□ 1.03
NPC1L1-203ENST00000423141 CCDC141Q6ZP82 1450 aa21.49■■□□□ 1.03
NPC1L1-203ENST00000423141 FBLN2P98095 1184 aa21.49■■□□□ 1.03
NPC1L1-203ENST00000423141 SYNJ2O15056 1496 aa21.49■■□□□ 1.03
NPC1L1-203ENST00000423141 CHMP7Q8WUX9 453 aaPredicted RBP21.48■■□□□ 1.03
NPC1L1-203ENST00000423141 CLASP1Q7Z460 1538 aa21.48■■□□□ 1.03
NPC1L1-203ENST00000423141 JPH4Q96JJ6 628 aa21.48■■□□□ 1.03
NPC1L1-203ENST00000423141 EIF2AK4Q9P2K8 1649 aaKnown RBP21.48■■□□□ 1.03
NPC1L1-203ENST00000423141 ARXQ96QS3 562 aa21.47■■□□□ 1.03
NPC1L1-203ENST00000423141 CARMIL2Q6F5E8 1435 aa21.46■■□□□ 1.03
NPC1L1-203ENST00000423141 SAMD9LQ8IVG5 1584 aa21.46■■□□□ 1.03
NPC1L1-203ENST00000423141 PANK1Q8TE04 598 aa21.46■■□□□ 1.03
NPC1L1-203ENST00000423141 NLRP1Q9C000 1473 aa21.46■■□□□ 1.03
NPC1L1-203ENST00000423141 COG6Q9Y2V7 657 aa21.45■■□□□ 1.03
NPC1L1-203ENST00000423141 BECN1Q14457 450 aa21.44■■□□□ 1.02
NPC1L1-203ENST00000423141 ANTXR1Q9H6X2 564 aa21.44■■□□□ 1.02
NPC1L1-203ENST00000423141 NUP160Q12769 1436 aa21.44■■□□□ 1.02
NPC1L1-203ENST00000423141 CLUAP1Q96AJ1 413 aa21.43■■□□□ 1.02
NPC1L1-203ENST00000423141 PIK3C2GO75747 1445 aa21.43■■□□□ 1.02
NPC1L1-203ENST00000423141 RNF17Q9BXT8 1623 aaKnown RBP21.43■■□□□ 1.02
NPC1L1-203ENST00000423141 UNC13BO14795 1591 aa21.42■■□□□ 1.02
NPC1L1-203ENST00000423141 E9PSI1 815 aa21.42■■□□□ 1.02
NPC1L1-203ENST00000423141 ASXL1Q8IXJ9 1541 aa21.41■■□□□ 1.02
NPC1L1-203ENST00000423141 MAPK8IP3Q9UPT6 1336 aa21.41■■□□□ 1.02
NPC1L1-203ENST00000423141 CGNL1Q0VF96 1302 aa21.41■■□□□ 1.02
NPC1L1-203ENST00000423141 CANXP27824 592 aaKnown RBP21.4■■□□□ 1.02
NPC1L1-203ENST00000423141 CDC42BPBQ9Y5S2 1711 aa21.4■■□□□ 1.02
NPC1L1-203ENST00000423141 ABCC2Q92887 1545 aa21.38■■□□□ 1.01
NPC1L1-203ENST00000423141 SYCP2Q9BX26 1530 aa21.38■■□□□ 1.01
NPC1L1-203ENST00000423141 PDE3AQ14432 1141 aa21.38■■□□□ 1.01
NPC1L1-203ENST00000423141 SPRYD3Q8NCJ5 442 aa21.38■■□□□ 1.01
NPC1L1-203ENST00000423141 TBC1D2Q9BYX2 928 aa21.38■■□□□ 1.01
NPC1L1-203ENST00000423141 CENPJQ9HC77 1338 aaPredicted RBP21.37■■□□□ 1.01
NPC1L1-203ENST00000423141 SYNMO15061 1565 aa21.37■■□□□ 1.01
NPC1L1-203ENST00000423141 L1TD1Q5T7N2 865 aaKnown RBP21.37■■□□□ 1.01
NPC1L1-203ENST00000423141 IQGAP3Q86VI3 1631 aa21.36■■□□□ 1.01
NPC1L1-203ENST00000423141 XRCC6P12956 609 aaKnown RBP eCLIP21.35■■□□□ 1.01
NPC1L1-203ENST00000423141 TNNQ9UQP3 1299 aa21.35■■□□□ 1.01
NPC1L1-203ENST00000423141 TBC1D32Q96NH3 1257 aa21.35■■□□□ 1.01
NPC1L1-203ENST00000423141 GZF1Q9H116 711 aaPredicted RBP21.34■■□□□ 1.01
NPC1L1-203ENST00000423141 IQGAP1P46940 1657 aa21.34■■□□□ 1.01
NPC1L1-203ENST00000423141 RSPH4AQ5TD94 716 aa21.34■■□□□ 1.01
NPC1L1-203ENST00000423141 PANK2Q9BZ23 570 aa21.34■■□□□ 1.01
NPC1L1-203ENST00000423141 PCDHB15Q9Y5E8 787 aa21.34■■□□□ 1.01
NPC1L1-203ENST00000423141 PREX2Q70Z35 1606 aa21.33■■□□□ 1.01
NPC1L1-203ENST00000423141 MYOM1P52179 1685 aa21.33■■□□□ 1
NPC1L1-203ENST00000423141 ATP10AO60312 1499 aa21.32■■□□□ 1
NPC1L1-203ENST00000423141 MADDQ8WXG6 1647 aa21.32■■□□□ 1
NPC1L1-203ENST00000423141 RLBP1P12271 317 aa21.32■■□□□ 1
NPC1L1-203ENST00000423141 CDCA8Q53HL2 280 aa21.32■■□□□ 1
NPC1L1-203ENST00000423141 WWC1Q8IX03 1113 aa21.32■■□□□ 1
NPC1L1-203ENST00000423141 UPF2Q9HAU5 1272 aaKnown RBP21.3■■□□□ 1
NPC1L1-203ENST00000423141 PDZRN3Q9UPQ7 1066 aa21.3■■□□□ 1
NPC1L1-203ENST00000423141 NEUROD2Q15784 382 aa21.3■■□□□ 1
NPC1L1-203ENST00000423141 NPC1L1Q9UHC9 1359 aa21.29■■□□□ 1
NPC1L1-203ENST00000423141 GOLGA6L3A6NEY3 463 aa21.29■■□□□ 1
NPC1L1-203ENST00000423141 SCAF11Q99590 1463 aaKnown RBP21.29■■□□□ 1
NPC1L1-203ENST00000423141 BCL2L13Q9BXK5 485 aa21.29■■□□□ 1
NPC1L1-203ENST00000423141 RRP7AQ9Y3A4 280 aaKnown RBP21.28■■□□□ 1
NPC1L1-203ENST00000423141 FSD2A1L4K1 749 aa21.28■■□□□ 1
NPC1L1-203ENST00000423141 NINLQ9Y2I6 1382 aa21.27■■□□□ 1
NPC1L1-203ENST00000423141 MCM4P33991 863 aa21.27■■□□□ 1
NPC1L1-203ENST00000423141 CARD14Q9BXL6 1004 aa21.27■□□□□ 0.99
NPC1L1-203ENST00000423141 ARHGAP5Q13017 1502 aa21.27■□□□□ 0.99
NPC1L1-203ENST00000423141 RARSP54136 660 aaKnown RBP21.26■□□□□ 0.99
NPC1L1-203ENST00000423141 MAST1Q9Y2H9 1570 aa21.26■□□□□ 0.99
NPC1L1-203ENST00000423141 PLXNC1O60486 1568 aa21.26■□□□□ 0.99
NPC1L1-203ENST00000423141 PMFBP1Q8TBY8 1022 aa21.25■□□□□ 0.99
NPC1L1-203ENST00000423141 NAP1L5Q96NT1 182 aaPredicted RBP21.24■□□□□ 0.99
NPC1L1-203ENST00000423141 TTC37Q6PGP7 1564 aa21.23■□□□□ 0.99
NPC1L1-203ENST00000423141 PNNQ9H307 717 aaKnown RBP21.21■□□□□ 0.99
NPC1L1-203ENST00000423141 DUOX2Q9NRD8 1548 aa21.2■□□□□ 0.98
NPC1L1-203ENST00000423141 SCAPERQ9BY12 1400 aa21.19■□□□□ 0.98
NPC1L1-203ENST00000423141 TRAK2O60296 914 aa21.19■□□□□ 0.98
NPC1L1-203ENST00000423141 CLCN1P35523 988 aa21.19■□□□□ 0.98
NPC1L1-203ENST00000423141 TNNT2P45379 298 aaPredicted RBP21.19■□□□□ 0.98
NPC1L1-203ENST00000423141 NGEFQ8N5V2 710 aa21.19■□□□□ 0.98
NPC1L1-203ENST00000423141 KDM5AP29375 1690 aaKnown RBP21.19■□□□□ 0.98
NPC1L1-203ENST00000423141 MFAP1P55081 439 aaKnown RBP21.18■□□□□ 0.98
NPC1L1-203ENST00000423141 RTEL1-TNFRSF6BF6WH68 1400 aa21.18■□□□□ 0.98
NPC1L1-203ENST00000423141 CEP152O94986 1710 aa21.18■□□□□ 0.98
NPC1L1-203ENST00000423141 SPHKAPQ2M3C7 1700 aa21.17■□□□□ 0.98
NPC1L1-203ENST00000423141 C22orf23Q9BZE7 217 aa21.17■□□□□ 0.98
NPC1L1-203ENST00000423141 RWDD1Q9H446 243 aaPredicted RBP21.17■□□□□ 0.98
NPC1L1-203ENST00000423141 TCP11L2Q8N4U5 519 aa21.16■□□□□ 0.98
NPC1L1-203ENST00000423141 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.16■□□□□ 0.98
NPC1L1-203ENST00000423141 ERVK-7P63135 1459 aa21.16■□□□□ 0.98
NPC1L1-203ENST00000423141 ERCC6Q03468 1493 aa21.16■□□□□ 0.98
NPC1L1-203ENST00000423141 CHMP5Q9NZZ3 219 aa21.16■□□□□ 0.98
NPC1L1-203ENST00000423141 POLR3AO14802 1390 aaPredicted RBP21.15■□□□□ 0.98
NPC1L1-203ENST00000423141 ZMYM3Q14202 1370 aa21.15■□□□□ 0.98
NPC1L1-203ENST00000423141 CFAP70Q5T0N1 1121 aa21.14■□□□□ 0.97
NPC1L1-203ENST00000423141 RUNDC1Q96C34 613 aa21.12■□□□□ 0.97
NPC1L1-203ENST00000423141 AAMPQ13685 434 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms