RNA–Protein interactions for RNA: ENST00000422875.5

TRAPPC10-203, Transcript of trafficking protein particle complex 10, humanhuman

TSL 1 (best)

Gene TRAPPC10, Length 5,267 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-203ENST00000422875 ATP6V1DQ9Y5K8 247 aa21.53■■□□□ 1.04
TRAPPC10-203ENST00000422875 EVC2Q86UK5 1308 aa21.53■■□□□ 1.04
TRAPPC10-203ENST00000422875 ARAP1Q96P48 1450 aa21.52■■□□□ 1.04
TRAPPC10-203ENST00000422875 HDAC5Q9UQL6 1122 aa21.52■■□□□ 1.04
TRAPPC10-203ENST00000422875 TRAK2O60296 914 aa21.52■■□□□ 1.04
TRAPPC10-203ENST00000422875 PNISRQ8TF01 805 aaKnown RBP21.52■■□□□ 1.04
TRAPPC10-203ENST00000422875 DIAPH1O60610 1272 aaKnown RBP21.52■■□□□ 1.04
TRAPPC10-203ENST00000422875 NECTIN2Q92692 538 aa21.51■■□□□ 1.03
TRAPPC10-203ENST00000422875 BECN2A8MW95 431 aa21.51■■□□□ 1.03
TRAPPC10-203ENST00000422875 ZNF592Q92610 1267 aa21.51■■□□□ 1.03
TRAPPC10-203ENST00000422875 H3BQV1 296 aa21.51■■□□□ 1.03
TRAPPC10-203ENST00000422875 MRE11P49959 708 aa21.51■■□□□ 1.03
TRAPPC10-203ENST00000422875 IFFO2Q5TF58 517 aa21.51■■□□□ 1.03
TRAPPC10-203ENST00000422875 GOLGA6L19H0YKK7 550 aa21.5■■□□□ 1.03
TRAPPC10-203ENST00000422875 RRBP1Q9P2E9 1410 aaKnown RBP21.49■■□□□ 1.03
TRAPPC10-203ENST00000422875 RNF214Q8ND24 703 aa21.49■■□□□ 1.03
TRAPPC10-203ENST00000422875 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.49■■□□□ 1.03
TRAPPC10-203ENST00000422875 BCAR3O75815 825 aa21.48■■□□□ 1.03
TRAPPC10-203ENST00000422875 TAF7LQ5H9L4 462 aa21.48■■□□□ 1.03
TRAPPC10-203ENST00000422875 DIAPH3Q9NSV4 1193 aa21.48■■□□□ 1.03
TRAPPC10-203ENST00000422875 FAM184AQ8NB25 1140 aa21.48■■□□□ 1.03
TRAPPC10-203ENST00000422875 API5Q9BZZ5 524 aaKnown RBP21.48■■□□□ 1.03
TRAPPC10-203ENST00000422875 TCP11L2Q8N4U5 519 aa21.47■■□□□ 1.03
TRAPPC10-203ENST00000422875 COG3Q96JB2 828 aa21.47■■□□□ 1.03
TRAPPC10-203ENST00000422875 NUCB2P80303 420 aa21.47■■□□□ 1.03
TRAPPC10-203ENST00000422875 NASPP49321 788 aaPredicted RBP21.47■■□□□ 1.03
TRAPPC10-203ENST00000422875 NBPF1Q3BBV0 1214 aa21.46■■□□□ 1.03
TRAPPC10-203ENST00000422875 PDZRN3Q9UPQ7 1066 aa21.46■■□□□ 1.03
TRAPPC10-203ENST00000422875 VGFO15240 615 aaPredicted RBP21.46■■□□□ 1.03
TRAPPC10-203ENST00000422875 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.46■■□□□ 1.03
TRAPPC10-203ENST00000422875 TOMM22Q9NS69 142 aa21.46■■□□□ 1.03
TRAPPC10-203ENST00000422875 KIF3AQ9Y496 699 aa21.46■■□□□ 1.03
TRAPPC10-203ENST00000422875 HMOX1P09601 288 aa21.45■■□□□ 1.02
TRAPPC10-203ENST00000422875 GGNBP2Q9H3C7 697 aa21.45■■□□□ 1.02
TRAPPC10-203ENST00000422875 R3HCC1Q9Y3T6 440 aaKnown RBP21.45■■□□□ 1.02
TRAPPC10-203ENST00000422875 CCAR2Q8N163 923 aaKnown RBP21.45■■□□□ 1.02
TRAPPC10-203ENST00000422875 EIF2S2P20042 333 aaKnown RBP21.44■■□□□ 1.02
TRAPPC10-203ENST00000422875 PPP2R1AP30153 589 aa21.44■■□□□ 1.02
TRAPPC10-203ENST00000422875 VPS37CA5D8V6 355 aaPredicted RBP21.44■■□□□ 1.02
TRAPPC10-203ENST00000422875 MTHFSP49914 203 aa21.44■■□□□ 1.02
TRAPPC10-203ENST00000422875 CCDC34Q96HJ3 373 aa21.43■■□□□ 1.02
TRAPPC10-203ENST00000422875 INTS3Q68E01 1043 aaKnown RBP21.43■■□□□ 1.02
TRAPPC10-203ENST00000422875 SKAP1Q86WV1 359 aa21.42■■□□□ 1.02
TRAPPC10-203ENST00000422875 CLSTN1O94985 981 aa21.42■■□□□ 1.02
TRAPPC10-203ENST00000422875 RASSF8Q8NHQ8 419 aa21.42■■□□□ 1.02
TRAPPC10-203ENST00000422875 ANKRD50Q9ULJ7 1429 aa21.41■■□□□ 1.02
TRAPPC10-203ENST00000422875 NCOA2Q15596 1464 aa21.41■■□□□ 1.02
TRAPPC10-203ENST00000422875 FKBP5Q13451 457 aaPredicted RBP21.41■■□□□ 1.02
TRAPPC10-203ENST00000422875 CAVIN1Q6NZI2 390 aaKnown RBP21.41■■□□□ 1.02
TRAPPC10-203ENST00000422875 ZKSCAN1P17029 563 aaPredicted RBP21.41■■□□□ 1.02
TRAPPC10-203ENST00000422875 BCL11BQ9C0K0 894 aaPredicted RBP21.41■■□□□ 1.02
TRAPPC10-203ENST00000422875 GOLGA6L1Q8N7Z2 621 aa21.4■■□□□ 1.02
TRAPPC10-203ENST00000422875 FANCD2Q9BXW9 1451 aa21.4■■□□□ 1.02
TRAPPC10-203ENST00000422875 ZNF771Q7L3S4 317 aaPredicted RBP21.4■■□□□ 1.02
TRAPPC10-203ENST00000422875 WDR97A6NE52 1622 aa21.39■■□□□ 1.02
TRAPPC10-203ENST00000422875 FGD5Q6ZNL6 1462 aa21.39■■□□□ 1.02
TRAPPC10-203ENST00000422875 BICD2Q8TD16 824 aa21.39■■□□□ 1.01
TRAPPC10-203ENST00000422875 RAD54L2Q9Y4B4 1467 aa21.39■■□□□ 1.01
TRAPPC10-203ENST00000422875 MIA2Q96PC5 1412 aa21.38■■□□□ 1.01
TRAPPC10-203ENST00000422875 TMEM132EQ6IEE7 984 aa21.38■■□□□ 1.01
TRAPPC10-203ENST00000422875 NOC3LQ8WTT2 800 aaKnown RBP21.38■■□□□ 1.01
TRAPPC10-203ENST00000422875 CDC45O75419 566 aa21.37■■□□□ 1.01
TRAPPC10-203ENST00000422875 C9orf78Q9NZ63 289 aaPredicted RBP21.37■■□□□ 1.01
TRAPPC10-203ENST00000422875 SMC3Q9UQE7 1217 aa21.36■■□□□ 1.01
TRAPPC10-203ENST00000422875 PES1O00541 588 aaKnown RBP21.36■■□□□ 1.01
TRAPPC10-203ENST00000422875 EXOSC9Q06265 439 aaKnown RBP21.36■■□□□ 1.01
TRAPPC10-203ENST00000422875 AAMPQ13685 434 aa21.36■■□□□ 1.01
TRAPPC10-203ENST00000422875 PTPRGP23470 1445 aa21.36■■□□□ 1.01
TRAPPC10-203ENST00000422875 TPM3P06753 285 aa21.36■■□□□ 1.01
TRAPPC10-203ENST00000422875 RUFY2Q8WXA3 655 aa21.36■■□□□ 1.01
TRAPPC10-203ENST00000422875 TEFQ10587 303 aa21.35■■□□□ 1.01
TRAPPC10-203ENST00000422875 SMG6Q86US8 1419 aaKnown RBP21.35■■□□□ 1.01
TRAPPC10-203ENST00000422875 GNAI1P63096 354 aa21.35■■□□□ 1.01
TRAPPC10-203ENST00000422875 PDE3AQ14432 1141 aa21.35■■□□□ 1.01
TRAPPC10-203ENST00000422875 CFAP70Q5T0N1 1121 aa21.35■■□□□ 1.01
TRAPPC10-203ENST00000422875 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.35■■□□□ 1.01
TRAPPC10-203ENST00000422875 FBXW7Q969H0 707 aa21.35■■□□□ 1.01
TRAPPC10-203ENST00000422875 C1orf115Q9H7X2 142 aa21.35■■□□□ 1.01
TRAPPC10-203ENST00000422875 TSR2Q969E8 191 aaKnown RBP21.34■■□□□ 1.01
TRAPPC10-203ENST00000422875 CFTRP13569 1480 aa21.34■■□□□ 1.01
TRAPPC10-203ENST00000422875 CABP2Q9NPB3 220 aa21.34■■□□□ 1.01
TRAPPC10-203ENST00000422875 PRPF40AO75400 957 aaKnown RBP21.33■■□□□ 1
TRAPPC10-203ENST00000422875 IFIT2P09913 472 aaKnown RBP21.33■■□□□ 1
TRAPPC10-203ENST00000422875 IFT57Q9NWB7 429 aa21.32■■□□□ 1
TRAPPC10-203ENST00000422875 CASKIN1Q8WXD9 1431 aa21.32■■□□□ 1
TRAPPC10-203ENST00000422875 NEK4P51957 841 aa21.31■■□□□ 1
TRAPPC10-203ENST00000422875 C11orf95C9JLR9 678 aaPredicted RBP21.3■■□□□ 1
TRAPPC10-203ENST00000422875 MPNDQ8N594 471 aa21.3■■□□□ 1
TRAPPC10-203ENST00000422875 RBM10P98175 930 aaKnown RBP21.3■■□□□ 1
TRAPPC10-203ENST00000422875 HOMER1Q86YM7 354 aa21.3■■□□□ 1
TRAPPC10-203ENST00000422875 CUX1P39880 1505 aa21.3■■□□□ 1
TRAPPC10-203ENST00000422875 FOSBP53539 338 aa21.3■■□□□ 1
TRAPPC10-203ENST00000422875 PDE4CQ08493 712 aa21.3■■□□□ 1
TRAPPC10-203ENST00000422875 EID1Q9Y6B2 187 aa21.3■■□□□ 1
TRAPPC10-203ENST00000422875 TSPYL4Q9UJ04 414 aa21.28■■□□□ 1
TRAPPC10-203ENST00000422875 GAPVD1Q14C86 1478 aa21.28■■□□□ 1
TRAPPC10-203ENST00000422875 TPD52L1Q16890 204 aaPredicted RBP21.28■■□□□ 1
TRAPPC10-203ENST00000422875 TRHP20396 242 aaPredicted RBP21.27■■□□□ 1
TRAPPC10-203ENST00000422875 ROCK1Q13464 1354 aa21.27■■□□□ 1
TRAPPC10-203ENST00000422875 CCDC27Q2M243 656 aa21.27■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms