RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 TMEM2Q9UHN6 1383 aa22.74■■□□□ 1.23
DDX55-203ENST00000421670 RIMS2Q9UQ26 1411 aa22.74■■□□□ 1.23
DDX55-203ENST00000421670 THEMISQ8N1K5 641 aaPredicted RBP22.74■■□□□ 1.23
DDX55-203ENST00000421670 HSPA2P54652 639 aa22.72■■□□□ 1.23
DDX55-203ENST00000421670 NUTM2DQ5VT03 806 aaPredicted RBP22.71■■□□□ 1.23
DDX55-203ENST00000421670 L3MBTL2Q969R5 705 aa22.71■■□□□ 1.23
DDX55-203ENST00000421670 MYOM2P54296 1465 aa22.69■■□□□ 1.22
DDX55-203ENST00000421670 STRCQ7RTU9 1775 aa22.68■■□□□ 1.22
DDX55-203ENST00000421670 DCAF11Q8TEB1 546 aa22.68■■□□□ 1.22
DDX55-203ENST00000421670 IQGAP1P46940 1657 aa22.68■■□□□ 1.22
DDX55-203ENST00000421670 SCAF11Q99590 1463 aaKnown RBP22.68■■□□□ 1.22
DDX55-203ENST00000421670 RPGRIP1LQ68CZ1 1315 aa22.68■■□□□ 1.22
DDX55-203ENST00000421670 LTKP29376 864 aa22.66■■□□□ 1.22
DDX55-203ENST00000421670 KDM2AQ9Y2K7 1162 aa22.66■■□□□ 1.22
DDX55-203ENST00000421670 NRXN3Q9Y4C0 1643 aa22.65■■□□□ 1.22
DDX55-203ENST00000421670 SENP3Q9H4L4 574 aaPredicted RBP22.64■■□□□ 1.22
DDX55-203ENST00000421670 PPP1R15AO75807 674 aaPredicted RBP22.63■■□□□ 1.21
DDX55-203ENST00000421670 TXNDC2Q86VQ3 553 aa22.63■■□□□ 1.21
DDX55-203ENST00000421670 NRXN1Q9ULB1 1477 aa22.63■■□□□ 1.21
DDX55-203ENST00000421670 EID1Q9Y6B2 187 aa22.63■■□□□ 1.21
DDX55-203ENST00000421670 ADGRF5Q8IZF2 1346 aa22.62■■□□□ 1.21
DDX55-203ENST00000421670 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.62■■□□□ 1.21
DDX55-203ENST00000421670 PIK3C2GO75747 1445 aa22.61■■□□□ 1.21
DDX55-203ENST00000421670 SETD1AO15047 1707 aaKnown RBP22.61■■□□□ 1.21
DDX55-203ENST00000421670 SETBP1Q9Y6X0 1596 aa22.6■■□□□ 1.21
DDX55-203ENST00000421670 ANKLE2Q86XL3 938 aa22.6■■□□□ 1.21
DDX55-203ENST00000421670 TIMELESSQ9UNS1 1208 aa22.6■■□□□ 1.21
DDX55-203ENST00000421670 PRAG1Q86YV5 1406 aa22.6■■□□□ 1.21
DDX55-203ENST00000421670 NCKAP5LQ9HCH0 1330 aa22.6■■□□□ 1.21
DDX55-203ENST00000421670 VGFO15240 615 aaPredicted RBP22.59■■□□□ 1.21
DDX55-203ENST00000421670 TRPM1Q7Z4N2 1603 aa22.59■■□□□ 1.21
DDX55-203ENST00000421670 PLEKHG1Q9ULL1 1385 aa22.59■■□□□ 1.21
DDX55-203ENST00000421670 LAMC1P11047 1609 aa22.59■■□□□ 1.21
DDX55-203ENST00000421670 HDGFP51858 240 aaKnown RBP22.59■■□□□ 1.21
DDX55-203ENST00000421670 MED14O60244 1454 aa22.57■■□□□ 1.2
DDX55-203ENST00000421670 KIAA1210Q9ULL0 1709 aa22.57■■□□□ 1.2
DDX55-203ENST00000421670 NPHP4O75161 1426 aaPredicted RBP22.56■■□□□ 1.2
DDX55-203ENST00000421670 ALKQ9UM73 1620 aa22.55■■□□□ 1.2
DDX55-203ENST00000421670 STAC3Q96MF2 364 aa22.54■■□□□ 1.2
DDX55-203ENST00000421670 DIP2AQ14689 1571 aa22.53■■□□□ 1.2
DDX55-203ENST00000421670 NBPF8Q3BBV2 869 aa22.53■■□□□ 1.2
DDX55-203ENST00000421670 BCANQ96GW7 911 aa22.53■■□□□ 1.2
DDX55-203ENST00000421670 ADAMTS13Q76LX8 1427 aa22.53■■□□□ 1.2
DDX55-203ENST00000421670 ASXL1Q8IXJ9 1541 aa22.51■■□□□ 1.19
DDX55-203ENST00000421670 SLC26A8Q96RN1 970 aa22.49■■□□□ 1.19
DDX55-203ENST00000421670 RALGAPBQ86X10 1494 aa22.48■■□□□ 1.19
DDX55-203ENST00000421670 CFAP70Q5T0N1 1121 aa22.48■■□□□ 1.19
DDX55-203ENST00000421670 ADGRB1O14514 1584 aa22.46■■□□□ 1.19
DDX55-203ENST00000421670 C14orf93Q9H972 538 aaKnown RBP22.45■■□□□ 1.18
DDX55-203ENST00000421670 CHD2O14647 1828 aaKnown RBP22.45■■□□□ 1.18
DDX55-203ENST00000421670 ZEB1P37275 1124 aaPredicted RBP22.44■■□□□ 1.18
DDX55-203ENST00000421670 METP08581 1390 aa22.43■■□□□ 1.18
DDX55-203ENST00000421670 NBPF1Q3BBV0 1214 aa22.42■■□□□ 1.18
DDX55-203ENST00000421670 ROCK2O75116 1388 aaKnown RBP22.42■■□□□ 1.18
DDX55-203ENST00000421670 STRCP1A6NGW2 1772 aa22.41■■□□□ 1.18
DDX55-203ENST00000421670 KNDC1Q76NI1 1749 aa22.41■■□□□ 1.18
DDX55-203ENST00000421670 XRN1Q8IZH2 1706 aaKnown RBP22.41■■□□□ 1.18
DDX55-203ENST00000421670 TMEM132EQ6IEE7 984 aa22.41■■□□□ 1.18
DDX55-203ENST00000421670 TBX22Q9Y458 520 aa22.4■■□□□ 1.18
DDX55-203ENST00000421670 ARHGEF28Q8N1W1 1705 aaKnown RBP22.39■■□□□ 1.17
DDX55-203ENST00000421670 PTPRUQ92729 1446 aa22.38■■□□□ 1.17
DDX55-203ENST00000421670 NWD1Q149M9 1564 aa22.38■■□□□ 1.17
DDX55-203ENST00000421670 GPRASP1Q5JY77 1395 aa22.37■■□□□ 1.17
DDX55-203ENST00000421670 YTHDC2Q9H6S0 1430 aaKnown RBP22.37■■□□□ 1.17
DDX55-203ENST00000421670 DMRT2Q9Y5R5 561 aa22.36■■□□□ 1.17
DDX55-203ENST00000421670 PIK3R4Q99570 1358 aa22.35■■□□□ 1.17
DDX55-203ENST00000421670 CPS1P31327 1500 aa22.33■■□□□ 1.17
DDX55-203ENST00000421670 CARD11Q9BXL7 1154 aa22.33■■□□□ 1.16
DDX55-203ENST00000421670 STK26Q9P289 416 aa22.33■■□□□ 1.16
DDX55-203ENST00000421670 LRPPRCP42704 1394 aaKnown RBP22.32■■□□□ 1.16
DDX55-203ENST00000421670 TECPR2O15040 1411 aa22.29■■□□□ 1.16
DDX55-203ENST00000421670 ZNF335Q9H4Z2 1342 aaPredicted RBP22.29■■□□□ 1.16
DDX55-203ENST00000421670 TRAK1Q9UPV9 953 aa22.29■■□□□ 1.16
DDX55-203ENST00000421670 QRICH2Q9H0J4 1663 aa22.29■■□□□ 1.16
DDX55-203ENST00000421670 DLC1Q96QB1 1528 aa22.29■■□□□ 1.16
DDX55-203ENST00000421670 AMOTL2Q9Y2J4 779 aa22.29■■□□□ 1.16
DDX55-203ENST00000421670 NKTRP30414 1462 aaKnown RBP22.27■■□□□ 1.16
DDX55-203ENST00000421670 ABCC11Q96J66 1382 aa22.27■■□□□ 1.16
DDX55-203ENST00000421670 KCNA6P17658 529 aa22.27■■□□□ 1.16
DDX55-203ENST00000421670 PTCH1Q13635 1447 aa22.27■■□□□ 1.15
DDX55-203ENST00000421670 USP47Q96K76 1375 aa22.26■■□□□ 1.15
DDX55-203ENST00000421670 XIRP1Q702N8 1843 aaKnown RBP22.26■■□□□ 1.15
DDX55-203ENST00000421670 ROBO2Q9HCK4 1378 aa22.26■■□□□ 1.15
DDX55-203ENST00000421670 NALCNQ8IZF0 1738 aa22.24■■□□□ 1.15
DDX55-203ENST00000421670 EIF3AQ14152 1382 aaKnown RBP22.22■■□□□ 1.15
DDX55-203ENST00000421670 PLEKHH1Q9ULM0 1364 aa22.22■■□□□ 1.15
DDX55-203ENST00000421670 LTBP4Q8N2S1 1624 aa22.22■■□□□ 1.15
DDX55-203ENST00000421670 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.22■■□□□ 1.15
DDX55-203ENST00000421670 FAM135BQ49AJ0 1406 aa22.21■■□□□ 1.15
DDX55-203ENST00000421670 PRAM1Q96QH2 718 aa22.21■■□□□ 1.15
DDX55-203ENST00000421670 WAPLQ7Z5K2 1190 aa22.2■■□□□ 1.14
DDX55-203ENST00000421670 SAFB2Q14151 953 aaKnown RBP eCLIP22.19■■□□□ 1.14
DDX55-203ENST00000421670 RBM33Q96EV2 1170 aaKnown RBP22.19■■□□□ 1.14
DDX55-203ENST00000421670 LRRC7Q96NW7 1537 aa22.18■■□□□ 1.14
DDX55-203ENST00000421670 CENPJQ9HC77 1338 aaPredicted RBP22.17■■□□□ 1.14
DDX55-203ENST00000421670 EIF4G2P78344 907 aaKnown RBP eCLIP22.16■■□□□ 1.14
DDX55-203ENST00000421670 POGKQ9P215 609 aa22.16■■□□□ 1.14
DDX55-203ENST00000421670 ST20-MTHFSA0A0A6YYL1 179 aa22.16■■□□□ 1.14
DDX55-203ENST00000421670 HSPA5P11021 654 aaKnown RBP22.16■■□□□ 1.14
DDX55-203ENST00000421670 PROSER2Q86WR7 435 aaPredicted RBP22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms