RNA–Protein interactions for RNA: ENST00000421263.1

VARS2-202, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 460 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-202ENST00000421263 TMEM131LA2VDJ0 1609 aa28.94■■■□□ 2.22
VARS2-202ENST00000421263 HDGFP51858 240 aaKnown RBP28.92■■■□□ 2.22
VARS2-202ENST00000421263 MYO5BQ9ULV0 1848 aa28.92■■■□□ 2.22
VARS2-202ENST00000421263 NUP155O75694 1391 aa28.91■■■□□ 2.22
VARS2-202ENST00000421263 PLEKHG1Q9ULL1 1385 aa28.9■■■□□ 2.22
VARS2-202ENST00000421263 TMEM94Q12767 1356 aa28.89■■■□□ 2.22
VARS2-202ENST00000421263 RIMS2Q9UQ26 1411 aa28.89■■■□□ 2.22
VARS2-202ENST00000421263 PROSER2Q86WR7 435 aaPredicted RBP28.86■■■□□ 2.21
VARS2-202ENST00000421263 NWD1Q149M9 1564 aa28.85■■■□□ 2.21
VARS2-202ENST00000421263 MED1Q15648 1581 aaPredicted RBP28.85■■■□□ 2.21
VARS2-202ENST00000421263 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.85■■■□□ 2.21
VARS2-202ENST00000421263 BCANQ96GW7 911 aa28.85■■■□□ 2.21
VARS2-202ENST00000421263 RRBP1Q9P2E9 1410 aaKnown RBP28.84■■■□□ 2.21
VARS2-202ENST00000421263 CHGAP10645 457 aaKnown RBP28.83■■■□□ 2.21
VARS2-202ENST00000421263 TBX22Q9Y458 520 aa28.83■■■□□ 2.21
VARS2-202ENST00000421263 FAM135BQ49AJ0 1406 aa28.83■■■□□ 2.21
VARS2-202ENST00000421263 NKTRP30414 1462 aaKnown RBP28.83■■■□□ 2.21
VARS2-202ENST00000421263 PPP1R15AO75807 674 aaPredicted RBP28.81■■■□□ 2.2
VARS2-202ENST00000421263 RBM33Q96EV2 1170 aaKnown RBP28.8■■■□□ 2.2
VARS2-202ENST00000421263 CHD2O14647 1828 aaKnown RBP28.79■■■□□ 2.2
VARS2-202ENST00000421263 SENP3Q9H4L4 574 aaPredicted RBP28.78■■■□□ 2.2
VARS2-202ENST00000421263 ADAMTS13Q76LX8 1427 aa28.76■■■□□ 2.19
VARS2-202ENST00000421263 NUTM2DQ5VT03 806 aaPredicted RBP28.75■■■□□ 2.19
VARS2-202ENST00000421263 NAIPQ13075 1403 aa28.72■■■□□ 2.19
VARS2-202ENST00000421263 PIK3R4Q99570 1358 aa28.71■■■□□ 2.19
VARS2-202ENST00000421263 NCOA3Q9Y6Q9 1424 aa28.7■■■□□ 2.19
VARS2-202ENST00000421263 MSH6P52701 1360 aa28.7■■■□□ 2.18
VARS2-202ENST00000421263 DIP2AQ14689 1571 aa28.69■■■□□ 2.18
VARS2-202ENST00000421263 SPHKAPQ2M3C7 1700 aa28.69■■■□□ 2.18
VARS2-202ENST00000421263 SLAIN2Q9P270 581 aa28.67■■■□□ 2.18
VARS2-202ENST00000421263 ROBO1Q9Y6N7 1651 aa28.66■■■□□ 2.18
VARS2-202ENST00000421263 PHF23Q9BUL5 403 aaPredicted RBP28.64■■■□□ 2.18
VARS2-202ENST00000421263 HFM1A2PYH4 1435 aa28.6■■■□□ 2.17
VARS2-202ENST00000421263 PTPRUQ92729 1446 aa28.6■■■□□ 2.17
VARS2-202ENST00000421263 AMOTL2Q9Y2J4 779 aa28.6■■■□□ 2.17
VARS2-202ENST00000421263 TRPM2O94759 1503 aa28.59■■■□□ 2.17
VARS2-202ENST00000421263 ZNF326Q5BKZ1 582 aaKnown RBP28.57■■■□□ 2.16
VARS2-202ENST00000421263 C19orf44Q9H6X5 657 aa28.57■■■□□ 2.16
VARS2-202ENST00000421263 SETBP1Q9Y6X0 1596 aa28.57■■■□□ 2.16
VARS2-202ENST00000421263 CLTCL1P53675 1640 aa28.57■■■□□ 2.16
VARS2-202ENST00000421263 NRXN3Q9Y4C0 1643 aa28.57■■■□□ 2.16
VARS2-202ENST00000421263 RGS17Q9UGC6 210 aaPredicted RBP28.56■■■□□ 2.16
VARS2-202ENST00000421263 CADPS2Q86UW7 1296 aa28.53■■■□□ 2.16
VARS2-202ENST00000421263 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.52■■■□□ 2.16
VARS2-202ENST00000421263 C14orf37Q86TY3 774 aa28.52■■■□□ 2.16
VARS2-202ENST00000421263 TRIM52Q96A61 297 aa28.52■■■□□ 2.16
VARS2-202ENST00000421263 NEXMIFQ5QGS0 1516 aa28.51■■■□□ 2.15
VARS2-202ENST00000421263 METP08581 1390 aa28.5■■■□□ 2.15
VARS2-202ENST00000421263 XRN1Q8IZH2 1706 aaKnown RBP28.49■■■□□ 2.15
VARS2-202ENST00000421263 KIF1BO60333 1816 aa28.48■■■□□ 2.15
VARS2-202ENST00000421263 ATF3P18847 181 aa28.48■■■□□ 2.15
VARS2-202ENST00000421263 PHLPP1O60346 1717 aa28.48■■■□□ 2.15
VARS2-202ENST00000421263 SLC4A1APQ9BWU0 796 aaKnown RBP28.47■■■□□ 2.15
VARS2-202ENST00000421263 JCADQ9P266 1359 aa28.44■■■□□ 2.14
VARS2-202ENST00000421263 DCCP43146 1447 aa28.43■■■□□ 2.14
VARS2-202ENST00000421263 VGFO15240 615 aaPredicted RBP28.42■■■□□ 2.14
VARS2-202ENST00000421263 COL16A1Q07092 1604 aaPredicted RBP28.42■■■□□ 2.14
VARS2-202ENST00000421263 RPGRIP1LQ68CZ1 1315 aa28.41■■■□□ 2.14
VARS2-202ENST00000421263 AHDC1Q5TGY3 1603 aaPredicted RBP28.39■■■□□ 2.13
VARS2-202ENST00000421263 BRINP3Q76B58 766 aa28.38■■■□□ 2.13
VARS2-202ENST00000421263 POTEAQ6S8J7 498 aa28.36■■■□□ 2.13
VARS2-202ENST00000421263 MST1RQ04912 1400 aa28.34■■■□□ 2.13
VARS2-202ENST00000421263 FOXD1Q16676 465 aa28.33■■■□□ 2.13
VARS2-202ENST00000421263 SPATA31A6Q5VVP1 1343 aa28.32■■■□□ 2.12
VARS2-202ENST00000421263 ADGRL3Q9HAR2 1447 aa28.32■■■□□ 2.12
VARS2-202ENST00000421263 SETD1AO15047 1707 aaKnown RBP28.32■■■□□ 2.12
VARS2-202ENST00000421263 MPHOSPH9Q99550 1183 aa28.31■■■□□ 2.12
VARS2-202ENST00000421263 PPLO60437 1756 aa28.29■■■□□ 2.12
VARS2-202ENST00000421263 PTCH1Q13635 1447 aa28.27■■■□□ 2.12
VARS2-202ENST00000421263 PRAG1Q86YV5 1406 aa28.27■■■□□ 2.12
VARS2-202ENST00000421263 ASXL1Q8IXJ9 1541 aa28.27■■■□□ 2.12
VARS2-202ENST00000421263 SHPRHQ149N8 1683 aa28.26■■■□□ 2.11
VARS2-202ENST00000421263 LRP6O75581 1613 aa28.25■■■□□ 2.11
VARS2-202ENST00000421263 NALCNQ8IZF0 1738 aa28.25■■■□□ 2.11
VARS2-202ENST00000421263 ROBO2Q9HCK4 1378 aa28.24■■■□□ 2.11
VARS2-202ENST00000421263 SETD5Q9C0A6 1442 aa28.24■■■□□ 2.11
VARS2-202ENST00000421263 CCDC144AA2RUR9 1427 aa28.23■■■□□ 2.11
VARS2-202ENST00000421263 SPATA31E1Q6ZUB1 1445 aa28.23■■■□□ 2.11
VARS2-202ENST00000421263 ACIN1Q9UKV3 1341 aaKnown RBP28.22■■■□□ 2.11
VARS2-202ENST00000421263 NHSL1Q5SYE7 1610 aa28.21■■■□□ 2.11
VARS2-202ENST00000421263 ADGRF5Q8IZF2 1346 aa28.2■■■□□ 2.11
VARS2-202ENST00000421263 LRRC59Q96AG4 307 aaKnown RBP28.19■■■□□ 2.1
VARS2-202ENST00000421263 C1orf167Q5SNV9 1468 aa28.19■■■□□ 2.1
VARS2-202ENST00000421263 RGL3Q3MIN7 710 aa28.18■■■□□ 2.1
VARS2-202ENST00000421263 ANKRD30BQ9BXX2 1392 aa28.16■■■□□ 2.1
VARS2-202ENST00000421263 MEX3CQ5U5Q3 659 aaKnown RBP28.15■■■□□ 2.1
VARS2-202ENST00000421263 DDX17Q92841 729 aaKnown RBP28.15■■■□□ 2.1
VARS2-202ENST00000421263 ZNF772Q68DY9 489 aaPredicted RBP28.14■■■□□ 2.1
VARS2-202ENST00000421263 IFT172Q9UG01 1749 aa28.12■■■□□ 2.09
VARS2-202ENST00000421263 LAMC1P11047 1609 aa28.11■■■□□ 2.09
VARS2-202ENST00000421263 ORAI2Q96SN7 254 aa28.11■■■□□ 2.09
VARS2-202ENST00000421263 NUTM2BA6NNL0 878 aaPredicted RBP28.1■■■□□ 2.09
VARS2-202ENST00000421263 NUTM2EB1AL46 878 aaPredicted RBP28.1■■■□□ 2.09
VARS2-202ENST00000421263 NUTM2AQ8IVF1 878 aaPredicted RBP28.1■■■□□ 2.09
VARS2-202ENST00000421263 PNPLA6Q8IY17 1366 aa28.09■■■□□ 2.09
VARS2-202ENST00000421263 SOS2Q07890 1332 aaPredicted RBP28.08■■■□□ 2.09
VARS2-202ENST00000421263 TECPR2O15040 1411 aa28.08■■■□□ 2.09
VARS2-202ENST00000421263 LRPPRCP42704 1394 aaKnown RBP28.07■■■□□ 2.08
VARS2-202ENST00000421263 ABCC11Q96J66 1382 aa28.07■■■□□ 2.08
VARS2-202ENST00000421263 PIK3C2GO75747 1445 aa28.07■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms