RNA–Protein interactions for RNA: ENST00000421124.6

DDR1-233, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-233ENST00000421124 ZFYVE9O95405 1425 aa27.4■■□□□ 1.98
DDR1-233ENST00000421124 RIMS2Q9UQ26 1411 aa27.4■■□□□ 1.98
DDR1-233ENST00000421124 HDGFP51858 240 aaKnown RBP27.35■■□□□ 1.97
DDR1-233ENST00000421124 ZNF326Q5BKZ1 582 aaKnown RBP27.34■■□□□ 1.97
DDR1-233ENST00000421124 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.33■■□□□ 1.97
DDR1-233ENST00000421124 ANKRD30BQ9BXX2 1392 aa27.32■■□□□ 1.96
DDR1-233ENST00000421124 PPP1R15AO75807 674 aaPredicted RBP27.31■■□□□ 1.96
DDR1-233ENST00000421124 NEXMIFQ5QGS0 1516 aa27.31■■□□□ 1.96
DDR1-233ENST00000421124 PLEKHG1Q9ULL1 1385 aa27.28■■□□□ 1.96
DDR1-233ENST00000421124 FBXO41Q8TF61 875 aa27.28■■□□□ 1.96
DDR1-233ENST00000421124 PPLO60437 1756 aa27.27■■□□□ 1.96
DDR1-233ENST00000421124 SPATA31E1Q6ZUB1 1445 aa27.26■■□□□ 1.95
DDR1-233ENST00000421124 NUTM2DQ5VT03 806 aaPredicted RBP27.26■■□□□ 1.95
DDR1-233ENST00000421124 LTBP4Q8N2S1 1624 aa27.23■■□□□ 1.95
DDR1-233ENST00000421124 RPGRIP1LQ68CZ1 1315 aa27.23■■□□□ 1.95
DDR1-233ENST00000421124 ZNF335Q9H4Z2 1342 aaPredicted RBP27.23■■□□□ 1.95
DDR1-233ENST00000421124 BCANQ96GW7 911 aa27.23■■□□□ 1.95
DDR1-233ENST00000421124 IFT172Q9UG01 1749 aa27.23■■□□□ 1.95
DDR1-233ENST00000421124 PCGF6Q9BYE7 350 aa27.22■■□□□ 1.95
DDR1-233ENST00000421124 RGL3Q3MIN7 710 aa27.2■■□□□ 1.94
DDR1-233ENST00000421124 SLC26A8Q96RN1 970 aa27.19■■□□□ 1.94
DDR1-233ENST00000421124 SENP3Q9H4L4 574 aaPredicted RBP27.19■■□□□ 1.94
DDR1-233ENST00000421124 DIP2AQ14689 1571 aa27.18■■□□□ 1.94
DDR1-233ENST00000421124 SETBP1Q9Y6X0 1596 aa27.18■■□□□ 1.94
DDR1-233ENST00000421124 DHX57Q6P158 1386 aaKnown RBP27.18■■□□□ 1.94
DDR1-233ENST00000421124 STRCP1A6NGW2 1772 aa27.17■■□□□ 1.94
DDR1-233ENST00000421124 NRXN3Q9Y4C0 1643 aa27.17■■□□□ 1.94
DDR1-233ENST00000421124 VGFO15240 615 aaPredicted RBP27.16■■□□□ 1.94
DDR1-233ENST00000421124 ADAMTS13Q76LX8 1427 aa27.16■■□□□ 1.94
DDR1-233ENST00000421124 CPS1P31327 1500 aa27.14■■□□□ 1.94
DDR1-233ENST00000421124 CHD2O14647 1828 aaKnown RBP27.12■■□□□ 1.93
DDR1-233ENST00000421124 TBX22Q9Y458 520 aa27.12■■□□□ 1.93
DDR1-233ENST00000421124 CERKQ8TCT0 537 aa27.11■■□□□ 1.93
DDR1-233ENST00000421124 NWD1Q149M9 1564 aa27.09■■□□□ 1.93
DDR1-233ENST00000421124 SETD1AO15047 1707 aaKnown RBP27.07■■□□□ 1.92
DDR1-233ENST00000421124 PIK3R4Q99570 1358 aa27.06■■□□□ 1.92
DDR1-233ENST00000421124 MYOM2P54296 1465 aa27.06■■□□□ 1.92
DDR1-233ENST00000421124 KCNA6P17658 529 aa27.05■■□□□ 1.92
DDR1-233ENST00000421124 ADGRF5Q8IZF2 1346 aa27.05■■□□□ 1.92
DDR1-233ENST00000421124 IQSEC2Q5JU85 1478 aa27.05■■□□□ 1.92
DDR1-233ENST00000421124 ALKQ9UM73 1620 aa27.05■■□□□ 1.92
DDR1-233ENST00000421124 LRRC7Q96NW7 1537 aa27.01■■□□□ 1.91
DDR1-233ENST00000421124 NKTRP30414 1462 aaKnown RBP27.01■■□□□ 1.91
DDR1-233ENST00000421124 NRXN1Q9ULB1 1477 aa27■■□□□ 1.91
DDR1-233ENST00000421124 PIK3C2GO75747 1445 aa27■■□□□ 1.91
DDR1-233ENST00000421124 XIRP1Q702N8 1843 aaKnown RBP27■■□□□ 1.91
DDR1-233ENST00000421124 SIN3AQ96ST3 1273 aa26.99■■□□□ 1.91
DDR1-233ENST00000421124 METP08581 1390 aa26.98■■□□□ 1.91
DDR1-233ENST00000421124 DCAF11Q8TEB1 546 aa26.98■■□□□ 1.91
DDR1-233ENST00000421124 XRN1Q8IZH2 1706 aaKnown RBP26.98■■□□□ 1.91
DDR1-233ENST00000421124 PTPRUQ92729 1446 aa26.98■■□□□ 1.91
DDR1-233ENST00000421124 STAC3Q96MF2 364 aa26.97■■□□□ 1.91
DDR1-233ENST00000421124 LAMC1P11047 1609 aa26.97■■□□□ 1.91
DDR1-233ENST00000421124 KDM2AQ9Y2K7 1162 aa26.95■■□□□ 1.9
DDR1-233ENST00000421124 NEUROD1Q13562 356 aa26.94■■□□□ 1.9
DDR1-233ENST00000421124 PROSER2Q86WR7 435 aaPredicted RBP26.93■■□□□ 1.9
DDR1-233ENST00000421124 AMOTL2Q9Y2J4 779 aa26.93■■□□□ 1.9
DDR1-233ENST00000421124 TMEM94Q12767 1356 aa26.9■■□□□ 1.9
DDR1-233ENST00000421124 ASXL1Q8IXJ9 1541 aa26.89■■□□□ 1.89
DDR1-233ENST00000421124 C14orf93Q9H972 538 aaKnown RBP26.88■■□□□ 1.89
DDR1-233ENST00000421124 CFAP70Q5T0N1 1121 aa26.86■■□□□ 1.89
DDR1-233ENST00000421124 L3MBTL2Q969R5 705 aa26.85■■□□□ 1.89
DDR1-233ENST00000421124 KNDC1Q76NI1 1749 aa26.85■■□□□ 1.89
DDR1-233ENST00000421124 PRAG1Q86YV5 1406 aa26.84■■□□□ 1.89
DDR1-233ENST00000421124 RBM33Q96EV2 1170 aaKnown RBP26.84■■□□□ 1.89
DDR1-233ENST00000421124 NCOA3Q9Y6Q9 1424 aa26.83■■□□□ 1.89
DDR1-233ENST00000421124 PTCH1Q13635 1447 aa26.82■■□□□ 1.88
DDR1-233ENST00000421124 KIAA1210Q9ULL0 1709 aa26.82■■□□□ 1.88
DDR1-233ENST00000421124 TMEM132EQ6IEE7 984 aa26.82■■□□□ 1.88
DDR1-233ENST00000421124 LRPPRCP42704 1394 aaKnown RBP26.81■■□□□ 1.88
DDR1-233ENST00000421124 UBAP1LF5GYI3 381 aa26.8■■□□□ 1.88
DDR1-233ENST00000421124 CLSPNQ9HAW4 1339 aa26.8■■□□□ 1.88
DDR1-233ENST00000421124 YTHDC2Q9H6S0 1430 aaKnown RBP26.8■■□□□ 1.88
DDR1-233ENST00000421124 TONSLQ96HA7 1378 aa26.79■■□□□ 1.88
DDR1-233ENST00000421124 ADGRB1O14514 1584 aa26.79■■□□□ 1.88
DDR1-233ENST00000421124 MSH6P52701 1360 aa26.78■■□□□ 1.88
DDR1-233ENST00000421124 TECPR2O15040 1411 aa26.78■■□□□ 1.88
DDR1-233ENST00000421124 ABCC11Q96J66 1382 aa26.77■■□□□ 1.88
DDR1-233ENST00000421124 ROBO2Q9HCK4 1378 aa26.77■■□□□ 1.88
DDR1-233ENST00000421124 TOM1O60784 492 aa26.77■■□□□ 1.88
DDR1-233ENST00000421124 STK26Q9P289 416 aa26.77■■□□□ 1.88
DDR1-233ENST00000421124 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.76■■□□□ 1.88
DDR1-233ENST00000421124 C14orf37Q86TY3 774 aa26.76■■□□□ 1.87
DDR1-233ENST00000421124 NALCNQ8IZF0 1738 aa26.75■■□□□ 1.87
DDR1-233ENST00000421124 CCER1Q8TC90 406 aaPredicted RBP26.74■■□□□ 1.87
DDR1-233ENST00000421124 TRPM1Q7Z4N2 1603 aa26.72■■□□□ 1.87
DDR1-233ENST00000421124 C19orf44Q9H6X5 657 aa26.71■■□□□ 1.87
DDR1-233ENST00000421124 ADGRL3Q9HAR2 1447 aa26.71■■□□□ 1.87
DDR1-233ENST00000421124 DLC1Q96QB1 1528 aa26.7■■□□□ 1.86
DDR1-233ENST00000421124 DCCP43146 1447 aa26.68■■□□□ 1.86
DDR1-233ENST00000421124 FAM135BQ49AJ0 1406 aa26.68■■□□□ 1.86
DDR1-233ENST00000421124 SIRT1Q96EB6 747 aa26.67■■□□□ 1.86
DDR1-233ENST00000421124 PIP4K2BP78356 416 aa26.66■■□□□ 1.86
DDR1-233ENST00000421124 SCAF1Q9H7N4 1312 aaKnown RBP26.65■■□□□ 1.86
DDR1-233ENST00000421124 ARHGEF28Q8N1W1 1705 aaKnown RBP26.65■■□□□ 1.86
DDR1-233ENST00000421124 ATF3P18847 181 aa26.65■■□□□ 1.86
DDR1-233ENST00000421124 WAPLQ7Z5K2 1190 aa26.65■■□□□ 1.86
DDR1-233ENST00000421124 CADPS2Q86UW7 1296 aa26.65■■□□□ 1.86
DDR1-233ENST00000421124 PLEKHH1Q9ULM0 1364 aa26.64■■□□□ 1.86
DDR1-233ENST00000421124 NBPF1Q3BBV0 1214 aa26.64■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms