RNA–Protein interactions for RNA: ENST00000420166.5

HMGXB4-203, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 1,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-203ENST00000420166 NPHP4O75161 1426 aaPredicted RBP30.38■■■□□ 2.45
HMGXB4-203ENST00000420166 ANKRD30BQ9BXX2 1392 aa30.36■■■□□ 2.45
HMGXB4-203ENST00000420166 ZNF326Q5BKZ1 582 aaKnown RBP30.31■■■□□ 2.44
HMGXB4-203ENST00000420166 PCGF6Q9BYE7 350 aa30.31■■■□□ 2.44
HMGXB4-203ENST00000420166 HDGFP51858 240 aaKnown RBP30.3■■■□□ 2.44
HMGXB4-203ENST00000420166 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.29■■■□□ 2.44
HMGXB4-203ENST00000420166 NEXMIFQ5QGS0 1516 aa30.28■■■□□ 2.44
HMGXB4-203ENST00000420166 SPATA31E1Q6ZUB1 1445 aa30.28■■■□□ 2.44
HMGXB4-203ENST00000420166 PPP1R15AO75807 674 aaPredicted RBP30.27■■■□□ 2.44
HMGXB4-203ENST00000420166 PLEKHG1Q9ULL1 1385 aa30.25■■■□□ 2.43
HMGXB4-203ENST00000420166 DHX57Q6P158 1386 aaKnown RBP30.24■■■□□ 2.43
HMGXB4-203ENST00000420166 PPLO60437 1756 aa30.23■■■□□ 2.43
HMGXB4-203ENST00000420166 NUTM2DQ5VT03 806 aaPredicted RBP30.23■■■□□ 2.43
HMGXB4-203ENST00000420166 RPGRIP1LQ68CZ1 1315 aa30.22■■■□□ 2.43
HMGXB4-203ENST00000420166 IFT172Q9UG01 1749 aa30.19■■■□□ 2.42
HMGXB4-203ENST00000420166 RGL3Q3MIN7 710 aa30.18■■■□□ 2.42
HMGXB4-203ENST00000420166 ZNF335Q9H4Z2 1342 aaPredicted RBP30.17■■■□□ 2.42
HMGXB4-203ENST00000420166 BCANQ96GW7 911 aa30.15■■■□□ 2.42
HMGXB4-203ENST00000420166 LTBP4Q8N2S1 1624 aa30.14■■■□□ 2.42
HMGXB4-203ENST00000420166 SENP3Q9H4L4 574 aaPredicted RBP30.14■■■□□ 2.42
HMGXB4-203ENST00000420166 SETBP1Q9Y6X0 1596 aa30.14■■■□□ 2.42
HMGXB4-203ENST00000420166 SLC26A8Q96RN1 970 aa30.13■■■□□ 2.41
HMGXB4-203ENST00000420166 NRXN3Q9Y4C0 1643 aa30.13■■■□□ 2.41
HMGXB4-203ENST00000420166 ADAMTS13Q76LX8 1427 aa30.13■■■□□ 2.41
HMGXB4-203ENST00000420166 DIP2AQ14689 1571 aa30.12■■■□□ 2.41
HMGXB4-203ENST00000420166 VGFO15240 615 aaPredicted RBP30.12■■■□□ 2.41
HMGXB4-203ENST00000420166 STRCP1A6NGW2 1772 aa30.08■■■□□ 2.41
HMGXB4-203ENST00000420166 TBX22Q9Y458 520 aa30.07■■■□□ 2.4
HMGXB4-203ENST00000420166 CPS1P31327 1500 aa30.04■■■□□ 2.4
HMGXB4-203ENST00000420166 MYOM2P54296 1465 aa30.04■■■□□ 2.4
HMGXB4-203ENST00000420166 ADGRF5Q8IZF2 1346 aa30.03■■■□□ 2.4
HMGXB4-203ENST00000420166 CHD2O14647 1828 aaKnown RBP30.02■■■□□ 2.4
HMGXB4-203ENST00000420166 NWD1Q149M9 1564 aa30.02■■■□□ 2.4
HMGXB4-203ENST00000420166 SETD1AO15047 1707 aaKnown RBP30.01■■■□□ 2.39
HMGXB4-203ENST00000420166 SIN3AQ96ST3 1273 aa30■■■□□ 2.39
HMGXB4-203ENST00000420166 CERKQ8TCT0 537 aa29.99■■■□□ 2.39
HMGXB4-203ENST00000420166 PIK3R4Q99570 1358 aa29.99■■■□□ 2.39
HMGXB4-203ENST00000420166 ALKQ9UM73 1620 aa29.99■■■□□ 2.39
HMGXB4-203ENST00000420166 NRXN1Q9ULB1 1477 aa29.99■■■□□ 2.39
HMGXB4-203ENST00000420166 KCNA6P17658 529 aa29.98■■■□□ 2.39
HMGXB4-203ENST00000420166 PIK3C2GO75747 1445 aa29.97■■■□□ 2.39
HMGXB4-203ENST00000420166 DCAF11Q8TEB1 546 aa29.95■■■□□ 2.39
HMGXB4-203ENST00000420166 METP08581 1390 aa29.94■■■□□ 2.38
HMGXB4-203ENST00000420166 NKTRP30414 1462 aaKnown RBP29.93■■■□□ 2.38
HMGXB4-203ENST00000420166 NEUROD1Q13562 356 aa29.93■■■□□ 2.38
HMGXB4-203ENST00000420166 STAC3Q96MF2 364 aa29.93■■■□□ 2.38
HMGXB4-203ENST00000420166 IQSEC2Q5JU85 1478 aa29.93■■■□□ 2.38
HMGXB4-203ENST00000420166 LRRC7Q96NW7 1537 aa29.92■■■□□ 2.38
HMGXB4-203ENST00000420166 PTPRUQ92729 1446 aa29.92■■■□□ 2.38
HMGXB4-203ENST00000420166 KDM2AQ9Y2K7 1162 aa29.91■■■□□ 2.38
HMGXB4-203ENST00000420166 XRN1Q8IZH2 1706 aaKnown RBP29.91■■■□□ 2.38
HMGXB4-203ENST00000420166 LAMC1P11047 1609 aa29.89■■■□□ 2.38
HMGXB4-203ENST00000420166 XIRP1Q702N8 1843 aaKnown RBP29.87■■■□□ 2.37
HMGXB4-203ENST00000420166 AMOTL2Q9Y2J4 779 aa29.85■■■□□ 2.37
HMGXB4-203ENST00000420166 L3MBTL2Q969R5 705 aa29.84■■■□□ 2.37
HMGXB4-203ENST00000420166 C14orf93Q9H972 538 aaKnown RBP29.84■■■□□ 2.37
HMGXB4-203ENST00000420166 ASXL1Q8IXJ9 1541 aa29.84■■■□□ 2.37
HMGXB4-203ENST00000420166 PROSER2Q86WR7 435 aaPredicted RBP29.83■■■□□ 2.37
HMGXB4-203ENST00000420166 CLSPNQ9HAW4 1339 aa29.81■■■□□ 2.36
HMGXB4-203ENST00000420166 CFAP70Q5T0N1 1121 aa29.81■■■□□ 2.36
HMGXB4-203ENST00000420166 TMEM94Q12767 1356 aa29.8■■■□□ 2.36
HMGXB4-203ENST00000420166 PRAG1Q86YV5 1406 aa29.79■■■□□ 2.36
HMGXB4-203ENST00000420166 TONSLQ96HA7 1378 aa29.77■■■□□ 2.36
HMGXB4-203ENST00000420166 TMEM132EQ6IEE7 984 aa29.76■■■□□ 2.35
HMGXB4-203ENST00000420166 PTCH1Q13635 1447 aa29.75■■■□□ 2.35
HMGXB4-203ENST00000420166 KNDC1Q76NI1 1749 aa29.75■■■□□ 2.35
HMGXB4-203ENST00000420166 CCER1Q8TC90 406 aaPredicted RBP29.75■■■□□ 2.35
HMGXB4-203ENST00000420166 RBM33Q96EV2 1170 aaKnown RBP29.75■■■□□ 2.35
HMGXB4-203ENST00000420166 KIAA1210Q9ULL0 1709 aa29.75■■■□□ 2.35
HMGXB4-203ENST00000420166 LRPPRCP42704 1394 aaKnown RBP29.75■■■□□ 2.35
HMGXB4-203ENST00000420166 ADGRB1O14514 1584 aa29.74■■■□□ 2.35
HMGXB4-203ENST00000420166 NCOA3Q9Y6Q9 1424 aa29.73■■■□□ 2.35
HMGXB4-203ENST00000420166 TECPR2O15040 1411 aa29.72■■■□□ 2.35
HMGXB4-203ENST00000420166 YTHDC2Q9H6S0 1430 aaKnown RBP29.72■■■□□ 2.35
HMGXB4-203ENST00000420166 ROBO2Q9HCK4 1378 aa29.71■■■□□ 2.35
HMGXB4-203ENST00000420166 ABCC11Q96J66 1382 aa29.7■■■□□ 2.35
HMGXB4-203ENST00000420166 FBXO41Q8TF61 875 aa29.69■■■□□ 2.34
HMGXB4-203ENST00000420166 STK26Q9P289 416 aa29.69■■■□□ 2.34
HMGXB4-203ENST00000420166 UBAP1LF5GYI3 381 aa29.66■■■□□ 2.34
HMGXB4-203ENST00000420166 MSH6P52701 1360 aa29.65■■■□□ 2.34
HMGXB4-203ENST00000420166 TRPM1Q7Z4N2 1603 aa29.64■■■□□ 2.34
HMGXB4-203ENST00000420166 C14orf37Q86TY3 774 aa29.64■■■□□ 2.34
HMGXB4-203ENST00000420166 NALCNQ8IZF0 1738 aa29.63■■■□□ 2.33
HMGXB4-203ENST00000420166 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.63■■■□□ 2.33
HMGXB4-203ENST00000420166 DLC1Q96QB1 1528 aa29.62■■■□□ 2.33
HMGXB4-203ENST00000420166 TOM1O60784 492 aa29.62■■■□□ 2.33
HMGXB4-203ENST00000420166 ADGRL3Q9HAR2 1447 aa29.62■■■□□ 2.33
HMGXB4-203ENST00000420166 FAM135BQ49AJ0 1406 aa29.61■■■□□ 2.33
HMGXB4-203ENST00000420166 NBPF1Q3BBV0 1214 aa29.59■■■□□ 2.33
HMGXB4-203ENST00000420166 NBPF8Q3BBV2 869 aa29.59■■■□□ 2.33
HMGXB4-203ENST00000420166 SIRT1Q96EB6 747 aa29.59■■■□□ 2.33
HMGXB4-203ENST00000420166 C19orf44Q9H6X5 657 aa29.59■■■□□ 2.33
HMGXB4-203ENST00000420166 DCCP43146 1447 aa29.57■■■□□ 2.32
HMGXB4-203ENST00000420166 PLEKHH1Q9ULM0 1364 aa29.56■■■□□ 2.32
HMGXB4-203ENST00000420166 WAPLQ7Z5K2 1190 aa29.56■■■□□ 2.32
HMGXB4-203ENST00000420166 TIMELESSQ9UNS1 1208 aa29.56■■■□□ 2.32
HMGXB4-203ENST00000420166 TRAK1Q9UPV9 953 aa29.56■■■□□ 2.32
HMGXB4-203ENST00000420166 ARHGEF28Q8N1W1 1705 aaKnown RBP29.56■■■□□ 2.32
HMGXB4-203ENST00000420166 CADPS2Q86UW7 1296 aa29.52■■■□□ 2.32
HMGXB4-203ENST00000420166 PRAM1Q96QH2 718 aa29.52■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms