RNA–Protein interactions for RNA: ENST00000419799.5

NOD1-205, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-205ENST00000419799 SLAIN2Q9P270 581 aa21.48■■□□□ 1.03
NOD1-205ENST00000419799 PHLPP1O60346 1717 aa21.46■■□□□ 1.03
NOD1-205ENST00000419799 ANKRD30AQ9BXX3 1397 aa21.46■■□□□ 1.03
NOD1-205ENST00000419799 SETD1AO15047 1707 aaKnown RBP21.43■■□□□ 1.02
NOD1-205ENST00000419799 BCANQ96GW7 911 aa21.42■■□□□ 1.02
NOD1-205ENST00000419799 PLEKHG1Q9ULL1 1385 aa21.42■■□□□ 1.02
NOD1-205ENST00000419799 NCOA3Q9Y6Q9 1424 aa21.42■■□□□ 1.02
NOD1-205ENST00000419799 COL16A1Q07092 1604 aaPredicted RBP21.41■■□□□ 1.02
NOD1-205ENST00000419799 RPRD2Q5VT52 1461 aaKnown RBP21.41■■□□□ 1.02
NOD1-205ENST00000419799 ZFYVE9O95405 1425 aa21.41■■□□□ 1.02
NOD1-205ENST00000419799 FGD6Q6ZV73 1430 aa21.41■■□□□ 1.02
NOD1-205ENST00000419799 CHD2O14647 1828 aaKnown RBP21.4■■□□□ 1.02
NOD1-205ENST00000419799 SPATA31A6Q5VVP1 1343 aa21.39■■□□□ 1.01
NOD1-205ENST00000419799 HDGFP51858 240 aaKnown RBP21.39■■□□□ 1.01
NOD1-205ENST00000419799 CHIC2Q9UKJ5 165 aa21.39■■□□□ 1.01
NOD1-205ENST00000419799 TBX22Q9Y458 520 aa21.37■■□□□ 1.01
NOD1-205ENST00000419799 ADGRL2O95490 1459 aa21.36■■□□□ 1.01
NOD1-205ENST00000419799 RIMS2Q9UQ26 1411 aa21.36■■□□□ 1.01
NOD1-205ENST00000419799 LRP6O75581 1613 aa21.36■■□□□ 1.01
NOD1-205ENST00000419799 ZNF772Q68DY9 489 aaPredicted RBP21.35■■□□□ 1.01
NOD1-205ENST00000419799 PPP1R15AO75807 674 aaPredicted RBP21.34■■□□□ 1.01
NOD1-205ENST00000419799 PPARGC1BQ86YN6 1023 aaKnown RBP21.33■■□□□ 1.01
NOD1-205ENST00000419799 UPF1Q92900 1129 aaKnown RBP eCLIP21.33■■□□□ 1.01
NOD1-205ENST00000419799 TMEM131LA2VDJ0 1609 aa21.33■■□□□ 1
NOD1-205ENST00000419799 AHDC1Q5TGY3 1603 aaPredicted RBP21.33■■□□□ 1
NOD1-205ENST00000419799 CADPS2Q86UW7 1296 aa21.32■■□□□ 1
NOD1-205ENST00000419799 GCC2Q8IWJ2 1684 aa21.31■■□□□ 1
NOD1-205ENST00000419799 MEX3CQ5U5Q3 659 aaKnown RBP21.31■■□□□ 1
NOD1-205ENST00000419799 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.31■■□□□ 1
NOD1-205ENST00000419799 MYO5BQ9ULV0 1848 aa21.31■■□□□ 1
NOD1-205ENST00000419799 C19orf44Q9H6X5 657 aa21.3■■□□□ 1
NOD1-205ENST00000419799 PIK3R4Q99570 1358 aa21.3■■□□□ 1
NOD1-205ENST00000419799 SHPRHQ149N8 1683 aa21.3■■□□□ 1
NOD1-205ENST00000419799 ANKRD50Q9ULJ7 1429 aa21.29■■□□□ 1
NOD1-205ENST00000419799 DIP2AQ14689 1571 aa21.29■■□□□ 1
NOD1-205ENST00000419799 C14orf37Q86TY3 774 aa21.29■■□□□ 1
NOD1-205ENST00000419799 ADAMTS13Q76LX8 1427 aa21.29■■□□□ 1
NOD1-205ENST00000419799 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.28■■□□□ 1
NOD1-205ENST00000419799 ATF3P18847 181 aa21.27■■□□□ 1
NOD1-205ENST00000419799 TRIM52Q96A61 297 aa21.26■□□□□ 0.99
NOD1-205ENST00000419799 RXRBP28702 533 aa21.24■□□□□ 0.99
NOD1-205ENST00000419799 CDK12Q9NYV4 1490 aaPredicted RBP21.24■□□□□ 0.99
NOD1-205ENST00000419799 FAM50AQ14320 339 aaKnown RBP21.23■□□□□ 0.99
NOD1-205ENST00000419799 BRINP3Q76B58 766 aa21.22■□□□□ 0.99
NOD1-205ENST00000419799 CHGAP10645 457 aaKnown RBP21.21■□□□□ 0.99
NOD1-205ENST00000419799 DCCP43146 1447 aa21.21■□□□□ 0.99
NOD1-205ENST00000419799 TRPM2O94759 1503 aa21.2■□□□□ 0.98
NOD1-205ENST00000419799 UNC13BO14795 1591 aa21.2■□□□□ 0.98
NOD1-205ENST00000419799 NUTM2DQ5VT03 806 aaPredicted RBP21.19■□□□□ 0.98
NOD1-205ENST00000419799 AMOTL2Q9Y2J4 779 aa21.18■□□□□ 0.98
NOD1-205ENST00000419799 PTPRUQ92729 1446 aa21.18■□□□□ 0.98
NOD1-205ENST00000419799 SETD5Q9C0A6 1442 aa21.18■□□□□ 0.98
NOD1-205ENST00000419799 E9PCH4 1651 aa21.18■□□□□ 0.98
NOD1-205ENST00000419799 NUTM2BA6NNL0 878 aaPredicted RBP21.16■□□□□ 0.98
NOD1-205ENST00000419799 NUTM2EB1AL46 878 aaPredicted RBP21.16■□□□□ 0.98
NOD1-205ENST00000419799 NUTM2AQ8IVF1 878 aaPredicted RBP21.16■□□□□ 0.98
NOD1-205ENST00000419799 ASXL1Q8IXJ9 1541 aa21.15■□□□□ 0.98
NOD1-205ENST00000419799 AFF2P51816 1311 aa21.14■□□□□ 0.97
NOD1-205ENST00000419799 MST1RQ04912 1400 aa21.12■□□□□ 0.97
NOD1-205ENST00000419799 NHSL1Q5SYE7 1610 aa21.12■□□□□ 0.97
NOD1-205ENST00000419799 IQGAP3Q86VI3 1631 aa21.12■□□□□ 0.97
NOD1-205ENST00000419799 LRRC59Q96AG4 307 aaKnown RBP21.12■□□□□ 0.97
NOD1-205ENST00000419799 XRN1Q8IZH2 1706 aaKnown RBP21.12■□□□□ 0.97
NOD1-205ENST00000419799 SETBP1Q9Y6X0 1596 aa21.1■□□□□ 0.97
NOD1-205ENST00000419799 ROCK1Q13464 1354 aa21.09■□□□□ 0.97
NOD1-205ENST00000419799 NRXN3Q9Y4C0 1643 aa21.08■□□□□ 0.97
NOD1-205ENST00000419799 RGS12O14924 1447 aa21.08■□□□□ 0.97
NOD1-205ENST00000419799 RBM6P78332 1123 aaKnown RBP21.08■□□□□ 0.97
NOD1-205ENST00000419799 ITGAEP38570 1179 aa21.07■□□□□ 0.96
NOD1-205ENST00000419799 QTRT2Q9H974 415 aaKnown RBP21.06■□□□□ 0.96
NOD1-205ENST00000419799 PNPLA6Q8IY17 1366 aa21.06■□□□□ 0.96
NOD1-205ENST00000419799 C8orf37Q96NL8 207 aa21.05■□□□□ 0.96
NOD1-205ENST00000419799 NUP155O75694 1391 aa21.04■□□□□ 0.96
NOD1-205ENST00000419799 ADGRL3Q9HAR2 1447 aa21.04■□□□□ 0.96
NOD1-205ENST00000419799 METP08581 1390 aa21.03■□□□□ 0.96
NOD1-205ENST00000419799 DDX17Q92841 729 aaKnown RBP21■□□□□ 0.95
NOD1-205ENST00000419799 NGLY1Q96IV0 654 aa21■□□□□ 0.95
NOD1-205ENST00000419799 NALCNQ8IZF0 1738 aa20.98■□□□□ 0.95
NOD1-205ENST00000419799 LAMC1P11047 1609 aa20.97■□□□□ 0.95
NOD1-205ENST00000419799 ZNF326Q5BKZ1 582 aaKnown RBP20.97■□□□□ 0.95
NOD1-205ENST00000419799 C1orf167Q5SNV9 1468 aa20.96■□□□□ 0.95
NOD1-205ENST00000419799 SPHKAPQ2M3C7 1700 aa20.96■□□□□ 0.95
NOD1-205ENST00000419799 POTEDQ86YR6 584 aa20.96■□□□□ 0.95
NOD1-205ENST00000419799 ATAD2Q6PL18 1390 aa20.96■□□□□ 0.95
NOD1-205ENST00000419799 ADAMTS2O95450 1211 aa20.94■□□□□ 0.94
NOD1-205ENST00000419799 SOS2Q07890 1332 aaPredicted RBP20.94■□□□□ 0.94
NOD1-205ENST00000419799 NEXMIFQ5QGS0 1516 aa20.93■□□□□ 0.94
NOD1-205ENST00000419799 TRPC5Q9UL62 973 aaPredicted RBP20.92■□□□□ 0.94
NOD1-205ENST00000419799 PTCH1Q13635 1447 aa20.91■□□□□ 0.94
NOD1-205ENST00000419799 FNBP4Q8N3X1 1017 aaPredicted RBP20.91■□□□□ 0.94
NOD1-205ENST00000419799 USP21Q9UK80 565 aa20.91■□□□□ 0.94
NOD1-205ENST00000419799 ORAI2Q96SN7 254 aa20.88■□□□□ 0.93
NOD1-205ENST00000419799 ATRNO75882 1429 aa20.87■□□□□ 0.93
NOD1-205ENST00000419799 PRAG1Q86YV5 1406 aa20.87■□□□□ 0.93
NOD1-205ENST00000419799 CLTCL1P53675 1640 aa20.87■□□□□ 0.93
NOD1-205ENST00000419799 RRBP1Q9P2E9 1410 aaKnown RBP20.87■□□□□ 0.93
NOD1-205ENST00000419799 COL22A1Q8NFW1 1626 aaPredicted RBP20.86■□□□□ 0.93
NOD1-205ENST00000419799 ZRANB1Q9UGI0 708 aa20.86■□□□□ 0.93
NOD1-205ENST00000419799 ROBO2Q9HCK4 1378 aa20.85■□□□□ 0.93
NOD1-205ENST00000419799 CCDC125Q86Z20 511 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms