RNA–Protein interactions for RNA: ENST00000419770.1

C9orf116-204, Transcript of chromosome 9 open reading frame 116, humanhuman

TSL 5

Gene C9orf116, Length 273 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf116-204ENST00000419770 ZFYVE9O95405 1425 aa28.86■■■□□ 2.21
C9orf116-204ENST00000419770 HDGFP51858 240 aaKnown RBP28.86■■■□□ 2.21
C9orf116-204ENST00000419770 NWD1Q149M9 1564 aa28.84■■■□□ 2.21
C9orf116-204ENST00000419770 ITGAEP38570 1179 aa28.84■■■□□ 2.21
C9orf116-204ENST00000419770 BCANQ96GW7 911 aa28.84■■■□□ 2.21
C9orf116-204ENST00000419770 TMEM94Q12767 1356 aa28.84■■■□□ 2.21
C9orf116-204ENST00000419770 NKTRP30414 1462 aaKnown RBP28.84■■■□□ 2.21
C9orf116-204ENST00000419770 PLEKHG1Q9ULL1 1385 aa28.83■■■□□ 2.21
C9orf116-204ENST00000419770 RIMS2Q9UQ26 1411 aa28.83■■■□□ 2.21
C9orf116-204ENST00000419770 NUP155O75694 1391 aa28.82■■■□□ 2.2
C9orf116-204ENST00000419770 PPP1R15AO75807 674 aaPredicted RBP28.81■■■□□ 2.2
C9orf116-204ENST00000419770 PPARGC1BQ86YN6 1023 aaKnown RBP28.81■■■□□ 2.2
C9orf116-204ENST00000419770 PROSER2Q86WR7 435 aaPredicted RBP28.79■■■□□ 2.2
C9orf116-204ENST00000419770 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.78■■■□□ 2.2
C9orf116-204ENST00000419770 CHGAP10645 457 aaKnown RBP28.76■■■□□ 2.19
C9orf116-204ENST00000419770 SENP3Q9H4L4 574 aaPredicted RBP28.76■■■□□ 2.19
C9orf116-204ENST00000419770 FAM135BQ49AJ0 1406 aa28.76■■■□□ 2.19
C9orf116-204ENST00000419770 CHD2O14647 1828 aaKnown RBP28.76■■■□□ 2.19
C9orf116-204ENST00000419770 TBX22Q9Y458 520 aa28.71■■■□□ 2.19
C9orf116-204ENST00000419770 RRBP1Q9P2E9 1410 aaKnown RBP28.7■■■□□ 2.19
C9orf116-204ENST00000419770 PHF23Q9BUL5 403 aaPredicted RBP28.7■■■□□ 2.18
C9orf116-204ENST00000419770 MSH6P52701 1360 aa28.7■■■□□ 2.18
C9orf116-204ENST00000419770 DIP2AQ14689 1571 aa28.7■■■□□ 2.18
C9orf116-204ENST00000419770 RBM33Q96EV2 1170 aaKnown RBP28.69■■■□□ 2.18
C9orf116-204ENST00000419770 SPHKAPQ2M3C7 1700 aa28.69■■■□□ 2.18
C9orf116-204ENST00000419770 ROBO1Q9Y6N7 1651 aa28.67■■■□□ 2.18
C9orf116-204ENST00000419770 ADAMTS13Q76LX8 1427 aa28.65■■■□□ 2.18
C9orf116-204ENST00000419770 PIK3R4Q99570 1358 aa28.64■■■□□ 2.18
C9orf116-204ENST00000419770 NCOA3Q9Y6Q9 1424 aa28.63■■■□□ 2.17
C9orf116-204ENST00000419770 NUTM2DQ5VT03 806 aaPredicted RBP28.63■■■□□ 2.17
C9orf116-204ENST00000419770 TRPM2O94759 1503 aa28.6■■■□□ 2.17
C9orf116-204ENST00000419770 SLAIN2Q9P270 581 aa28.59■■■□□ 2.17
C9orf116-204ENST00000419770 NAIPQ13075 1403 aa28.59■■■□□ 2.17
C9orf116-204ENST00000419770 SETBP1Q9Y6X0 1596 aa28.54■■■□□ 2.16
C9orf116-204ENST00000419770 C14orf37Q86TY3 774 aa28.53■■■□□ 2.16
C9orf116-204ENST00000419770 PHLPP1O60346 1717 aa28.52■■■□□ 2.16
C9orf116-204ENST00000419770 CLTCL1P53675 1640 aa28.51■■■□□ 2.15
C9orf116-204ENST00000419770 NRXN3Q9Y4C0 1643 aa28.51■■■□□ 2.15
C9orf116-204ENST00000419770 ZNF326Q5BKZ1 582 aaKnown RBP28.51■■■□□ 2.15
C9orf116-204ENST00000419770 HFM1A2PYH4 1435 aa28.51■■■□□ 2.15
C9orf116-204ENST00000419770 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.5■■■□□ 2.15
C9orf116-204ENST00000419770 C19orf44Q9H6X5 657 aa28.49■■■□□ 2.15
C9orf116-204ENST00000419770 AMOTL2Q9Y2J4 779 aa28.49■■■□□ 2.15
C9orf116-204ENST00000419770 KIF1BO60333 1816 aa28.48■■■□□ 2.15
C9orf116-204ENST00000419770 CADPS2Q86UW7 1296 aa28.48■■■□□ 2.15
C9orf116-204ENST00000419770 PTPRUQ92729 1446 aa28.47■■■□□ 2.15
C9orf116-204ENST00000419770 XRN1Q8IZH2 1706 aaKnown RBP28.46■■■□□ 2.15
C9orf116-204ENST00000419770 ATF3P18847 181 aa28.46■■■□□ 2.15
C9orf116-204ENST00000419770 NEXMIFQ5QGS0 1516 aa28.45■■■□□ 2.15
C9orf116-204ENST00000419770 RGS17Q9UGC6 210 aaPredicted RBP28.43■■■□□ 2.14
C9orf116-204ENST00000419770 JCADQ9P266 1359 aa28.42■■■□□ 2.14
C9orf116-204ENST00000419770 TRIM52Q96A61 297 aa28.42■■■□□ 2.14
C9orf116-204ENST00000419770 COL16A1Q07092 1604 aaPredicted RBP28.41■■■□□ 2.14
C9orf116-204ENST00000419770 DCCP43146 1447 aa28.41■■■□□ 2.14
C9orf116-204ENST00000419770 METP08581 1390 aa28.38■■■□□ 2.13
C9orf116-204ENST00000419770 AHDC1Q5TGY3 1603 aaPredicted RBP28.37■■■□□ 2.13
C9orf116-204ENST00000419770 SLC4A1APQ9BWU0 796 aaKnown RBP28.36■■■□□ 2.13
C9orf116-204ENST00000419770 VGFO15240 615 aaPredicted RBP28.32■■■□□ 2.12
C9orf116-204ENST00000419770 SPATA31A6Q5VVP1 1343 aa28.3■■■□□ 2.12
C9orf116-204ENST00000419770 RPGRIP1LQ68CZ1 1315 aa28.3■■■□□ 2.12
C9orf116-204ENST00000419770 BRINP3Q76B58 766 aa28.29■■■□□ 2.12
C9orf116-204ENST00000419770 SHPRHQ149N8 1683 aa28.29■■■□□ 2.12
C9orf116-204ENST00000419770 ADGRL3Q9HAR2 1447 aa28.28■■■□□ 2.12
C9orf116-204ENST00000419770 MST1RQ04912 1400 aa28.27■■■□□ 2.12
C9orf116-204ENST00000419770 POTEAQ6S8J7 498 aa28.27■■■□□ 2.12
C9orf116-204ENST00000419770 ASXL1Q8IXJ9 1541 aa28.27■■■□□ 2.12
C9orf116-204ENST00000419770 PPLO60437 1756 aa28.27■■■□□ 2.12
C9orf116-204ENST00000419770 SETD1AO15047 1707 aaKnown RBP28.26■■■□□ 2.12
C9orf116-204ENST00000419770 NALCNQ8IZF0 1738 aa28.26■■■□□ 2.11
C9orf116-204ENST00000419770 PTCH1Q13635 1447 aa28.24■■■□□ 2.11
C9orf116-204ENST00000419770 NHSL1Q5SYE7 1610 aa28.21■■■□□ 2.11
C9orf116-204ENST00000419770 PRAG1Q86YV5 1406 aa28.21■■■□□ 2.11
C9orf116-204ENST00000419770 LRP6O75581 1613 aa28.21■■■□□ 2.11
C9orf116-204ENST00000419770 CCDC144AA2RUR9 1427 aa28.18■■■□□ 2.1
C9orf116-204ENST00000419770 MEX3CQ5U5Q3 659 aaKnown RBP28.18■■■□□ 2.1
C9orf116-204ENST00000419770 SETD5Q9C0A6 1442 aa28.18■■■□□ 2.1
C9orf116-204ENST00000419770 FOXD1Q16676 465 aa28.17■■■□□ 2.1
C9orf116-204ENST00000419770 ACIN1Q9UKV3 1341 aaKnown RBP28.16■■■□□ 2.1
C9orf116-204ENST00000419770 ROBO2Q9HCK4 1378 aa28.15■■■□□ 2.1
C9orf116-204ENST00000419770 MPHOSPH9Q99550 1183 aa28.15■■■□□ 2.1
C9orf116-204ENST00000419770 ZNF772Q68DY9 489 aaPredicted RBP28.12■■■□□ 2.09
C9orf116-204ENST00000419770 LRRC59Q96AG4 307 aaKnown RBP28.12■■■□□ 2.09
C9orf116-204ENST00000419770 C1orf167Q5SNV9 1468 aa28.12■■■□□ 2.09
C9orf116-204ENST00000419770 SPATA31E1Q6ZUB1 1445 aa28.11■■■□□ 2.09
C9orf116-204ENST00000419770 IFT172Q9UG01 1749 aa28.1■■■□□ 2.09
C9orf116-204ENST00000419770 ANKRD30BQ9BXX2 1392 aa28.1■■■□□ 2.09
C9orf116-204ENST00000419770 LAMC1P11047 1609 aa28.08■■■□□ 2.09
C9orf116-204ENST00000419770 NUTM2BA6NNL0 878 aaPredicted RBP28.06■■■□□ 2.08
C9orf116-204ENST00000419770 NUTM2EB1AL46 878 aaPredicted RBP28.06■■■□□ 2.08
C9orf116-204ENST00000419770 RGL3Q3MIN7 710 aa28.06■■■□□ 2.08
C9orf116-204ENST00000419770 NUTM2AQ8IVF1 878 aaPredicted RBP28.06■■■□□ 2.08
C9orf116-204ENST00000419770 ADGRF5Q8IZF2 1346 aa28.06■■■□□ 2.08
C9orf116-204ENST00000419770 DDX17Q92841 729 aaKnown RBP28.04■■■□□ 2.08
C9orf116-204ENST00000419770 CDC42BPGQ6DT37 1551 aa28.03■■■□□ 2.08
C9orf116-204ENST00000419770 PNPLA6Q8IY17 1366 aa28.02■■■□□ 2.08
C9orf116-204ENST00000419770 TECPR2O15040 1411 aa28.01■■■□□ 2.07
C9orf116-204ENST00000419770 PIK3C2GO75747 1445 aa28■■■□□ 2.07
C9orf116-204ENST00000419770 ORAI2Q96SN7 254 aa27.99■■■□□ 2.07
C9orf116-204ENST00000419770 KNDC1Q76NI1 1749 aa27.98■■■□□ 2.07
C9orf116-204ENST00000419770 LRPPRCP42704 1394 aaKnown RBP27.98■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms